Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 RNU1-100P-201ENST00000365255 165 ntBASIC2.73□□□□□ -1.97
HOXC13P31276 RNU6-169P-201ENST00000365336 107 ntBASIC2.73□□□□□ -1.97
HOXC13P31276 RNU6-395P-201ENST00000365662 106 ntBASIC2.73□□□□□ -1.97
HOXC13P31276 Y_RNA.384-201ENST00000383909 102 ntBASIC2.73□□□□□ -1.97
HOXC13P31276 RNU6-74P-201ENST00000384235 107 ntBASIC2.73□□□□□ -1.97
HOXC13P31276 RNU6-456P-201ENST00000384493 107 ntBASIC2.73□□□□□ -1.97
HOXC13P31276 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.73□□□□□ -1.97
HOXC13P31276 CYCSP48-201ENST00000417124 323 ntBASIC2.73□□□□□ -1.97
HOXC13P31276 AC003685.2-201ENST00000422795 395 ntBASIC2.73□□□□□ -1.97
HOXC13P31276 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC2.73□□□□□ -1.97
HOXC13P31276 AC108059.2-201ENST00000434626 151 ntBASIC2.73□□□□□ -1.97
HOXC13P31276 AC236972.2-201ENST00000434979 310 ntBASIC2.73□□□□□ -1.97
HOXC13P31276 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.73□□□□□ -1.97
HOXC13P31276 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.73□□□□□ -1.97
HOXC13P31276 AL078601.1-201ENST00000444542 271 ntBASIC2.73□□□□□ -1.97
HOXC13P31276 BTF3P15-201ENST00000455606 336 ntBASIC2.73□□□□□ -1.97
HOXC13P31276 AC130509.1-201ENST00000464158 433 ntBASIC2.73□□□□□ -1.97
HOXC13P31276 AC083798.1-201ENST00000472671 131 ntBASIC2.73□□□□□ -1.97
HOXC13P31276 SRIP1-201ENST00000489235 288 ntBASIC2.73□□□□□ -1.97
HOXC13P31276 AC021146.2-201ENST00000504736 556 ntBASIC2.73□□□□□ -1.97
HOXC13P31276 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.73□□□□□ -1.97
HOXC13P31276 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.73□□□□□ -1.97
HOXC13P31276 SNORA31.6-201ENST00000516241 130 ntBASIC2.73□□□□□ -1.97
HOXC13P31276 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.73□□□□□ -1.97
HOXC13P31276 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.73□□□□□ -1.97
HOXC13P31276 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.73□□□□□ -1.97
HOXC13P31276 ELOCP31-201ENST00000540463 467 ntBASIC2.73□□□□□ -1.97
HOXC13P31276 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.73□□□□□ -1.97
HOXC13P31276 MIR4635-201ENST00000583759 79 ntBASIC2.73□□□□□ -1.97
HOXC13P31276 RPS15AP11-201ENST00000594193 385 ntBASIC2.73□□□□□ -1.97
HOXC13P31276 AC006006.1-201ENST00000603082 144 ntBASIC2.73□□□□□ -1.97
HOXC13P31276 AC136443.5-201ENST00000603741 370 ntBASIC2.73□□□□□ -1.97
HOXC13P31276 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.73□□□□□ -1.97
HOXC13P31276 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.73□□□□□ -1.97
HOXC13P31276 AL132822.1-201ENST00000617063 513 ntBASIC2.73□□□□□ -1.97
HOXC13P31276 MIR6134-201ENST00000617606 109 ntBASIC2.73□□□□□ -1.97
HOXC13P31276 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.73□□□□□ -1.97
HOXC13P31276 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.73□□□□□ -1.97
HOXC13P31276 AC103710.2-202ENST00000641454 2853 ntBASIC2.72□□□□□ -1.97
HOXC13P31276 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
HOXC13P31276 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.72□□□□□ -1.97
HOXC13P31276 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.72□□□□□ -1.97
HOXC13P31276 Y_RNA.128-201ENST00000363391 112 ntBASIC2.72□□□□□ -1.97
HOXC13P31276 Y_RNA.145-201ENST00000363527 102 ntBASIC2.72□□□□□ -1.97
HOXC13P31276 Y_RNA.202-201ENST00000364083 110 ntBASIC2.72□□□□□ -1.97
HOXC13P31276 Y_RNA.259-201ENST00000364619 101 ntBASIC2.72□□□□□ -1.97
HOXC13P31276 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.72□□□□□ -1.97
HOXC13P31276 Y_RNA.422-201ENST00000384054 114 ntBASIC2.72□□□□□ -1.97
HOXC13P31276 RNU6-463P-201ENST00000384340 107 ntBASIC2.72□□□□□ -1.97
HOXC13P31276 Y_RNA.474-201ENST00000384341 102 ntBASIC2.72□□□□□ -1.97
HOXC13P31276 SNORA24.1-201ENST00000384401 135 ntBASIC2.72□□□□□ -1.97
HOXC13P31276 RNU6-748P-201ENST00000384648 107 ntBASIC2.72□□□□□ -1.97
HOXC13P31276 MT-TR-201ENST00000387439 65 ntBASIC2.72□□□□□ -1.97
HOXC13P31276 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
HOXC13P31276 SNORA40C-201ENST00000391285 128 ntBASIC2.72□□□□□ -1.97
HOXC13P31276 AL139039.1-201ENST00000401900 692 ntBASIC2.72□□□□□ -1.97
HOXC13P31276 RNU2-63P-201ENST00000410792 194 ntBASIC2.72□□□□□ -1.97
HOXC13P31276 RNU6-373P-201ENST00000411247 98 ntBASIC2.72□□□□□ -1.97
HOXC13P31276 MTATP6P18-201ENST00000417994 673 ntBASIC2.72□□□□□ -1.97
HOXC13P31276 MTCO3P46-201ENST00000425787 232 ntBASIC2.72□□□□□ -1.97
HOXC13P31276 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.72□□□□□ -1.97
HOXC13P31276 snoU13.26-201ENST00000459452 105 ntBASIC2.72□□□□□ -1.97
HOXC13P31276 AC116655.1-201ENST00000508324 901 ntBASIC2.72□□□□□ -1.97
HOXC13P31276 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.72□□□□□ -1.97
HOXC13P31276 RPL7P20-201ENST00000520308 745 ntBASIC2.72□□□□□ -1.97
HOXC13P31276 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.72□□□□□ -1.97
HOXC13P31276 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.72□□□□□ -1.97
HOXC13P31276 SCOCP1-201ENST00000554676 349 ntBASIC2.72□□□□□ -1.97
HOXC13P31276 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.72□□□□□ -1.97
HOXC13P31276 AC009127.3-201ENST00000570531 403 ntBASIC2.72□□□□□ -1.97
HOXC13P31276 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.72□□□□□ -1.97
HOXC13P31276 AC010525.2-201ENST00000590920 195 ntBASIC2.72□□□□□ -1.97
HOXC13P31276 AC008121.1-201ENST00000603244 268 ntBASIC2.72□□□□□ -1.97
HOXC13P31276 AL109809.4-201ENST00000603520 2185 ntBASIC2.72□□□□□ -1.97
HOXC13P31276 Z84480.1-201ENST00000605131 311 ntBASIC2.72□□□□□ -1.97
HOXC13P31276 AC104237.2-201ENST00000612456 443 ntBASIC2.72□□□□□ -1.97
HOXC13P31276 AC093913.1-201ENST00000614178 329 ntBASIC2.72□□□□□ -1.97
HOXC13P31276 AC007792.1-201ENST00000623023 402 ntBASIC2.72□□□□□ -1.97
HOXC13P31276 AC090617.10-201ENST00000624308 134 ntBASIC2.72□□□□□ -1.97
HOXC13P31276 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC2.72□□□□□ -1.97
HOXC13P31276 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
HOXC13P31276 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
HOXC13P31276 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
HOXC13P31276 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.71□□□□□ -1.98
HOXC13P31276 U8.2-201ENST00000363156 134 ntBASIC2.71□□□□□ -1.98
HOXC13P31276 Y_RNA.146-201ENST00000363549 102 ntBASIC2.71□□□□□ -1.98
HOXC13P31276 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.71□□□□□ -1.98
HOXC13P31276 Z98749.2-208ENST00000381646 500 ntBASIC2.71□□□□□ -1.98
HOXC13P31276 RNU6-43P-201ENST00000384302 107 ntBASIC2.71□□□□□ -1.98
HOXC13P31276 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
HOXC13P31276 MIR764-201ENST00000390811 85 ntBASIC2.71□□□□□ -1.98
HOXC13P31276 RNU6-1158P-201ENST00000391167 107 ntBASIC2.71□□□□□ -1.98
HOXC13P31276 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.71□□□□□ -1.98
HOXC13P31276 RNU2-9P-201ENST00000410194 145 ntBASIC2.71□□□□□ -1.98
HOXC13P31276 RNU6-1148P-201ENST00000410992 104 ntBASIC2.71□□□□□ -1.98
HOXC13P31276 MTND3P8-201ENST00000412909 339 ntBASIC2.71□□□□□ -1.98
HOXC13P31276 Z98742.3-201ENST00000418637 326 ntBASIC2.71□□□□□ -1.98
HOXC13P31276 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.71□□□□□ -1.98
HOXC13P31276 IFNA20P-201ENST00000436840 528 ntBASIC2.71□□□□□ -1.98
HOXC13P31276 AC011816.1-201ENST00000441346 546 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms