Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 AP004217.1-201ENST00000480579 346 ntBASIC2.97□□□□□ -1.93
HOXA11P31270 AC011005.2-201ENST00000487324 359 ntBASIC2.97□□□□□ -1.93
HOXA11P31270 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.97□□□□□ -1.93
HOXA11P31270 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.97□□□□□ -1.93
HOXA11P31270 MTND3P25-201ENST00000509243 135 ntBASIC2.97□□□□□ -1.93
HOXA11P31270 RNA5SP385-201ENST00000515947 110 ntBASIC2.97□□□□□ -1.93
HOXA11P31270 Y_RNA.670-201ENST00000516255 105 ntBASIC2.97□□□□□ -1.93
HOXA11P31270 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.97□□□□□ -1.93
HOXA11P31270 HSPE1P20-201ENST00000538133 289 ntBASIC2.97□□□□□ -1.93
HOXA11P31270 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.97□□□□□ -1.93
HOXA11P31270 AL157871.3-201ENST00000557231 293 ntBASIC2.97□□□□□ -1.93
HOXA11P31270 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.97□□□□□ -1.93
HOXA11P31270 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.97□□□□□ -1.93
HOXA11P31270 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.97□□□□□ -1.93
HOXA11P31270 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HOXA11P31270 AL355877.2-201ENST00000603670 358 ntBASIC2.97□□□□□ -1.93
HOXA11P31270 AC007938.3-201ENST00000604965 623 ntBASIC2.97□□□□□ -1.93
HOXA11P31270 AC008121.3-201ENST00000618726 433 ntBASIC2.97□□□□□ -1.93
HOXA11P31270 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.97□□□□□ -1.93
HOXA11P31270 Z99571.1-201ENST00000636677 394 ntBASIC2.97□□□□□ -1.93
HOXA11P31270 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
HOXA11P31270 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.97□□□□□ -1.93
HOXA11P31270 Y_RNA.133-201ENST00000363428 110 ntBASIC2.96□□□□□ -1.94
HOXA11P31270 Y_RNA.148-201ENST00000363557 117 ntBASIC2.96□□□□□ -1.94
HOXA11P31270 RNU6-596P-201ENST00000365395 98 ntBASIC2.96□□□□□ -1.94
HOXA11P31270 RNU6-395P-201ENST00000365662 106 ntBASIC2.96□□□□□ -1.94
HOXA11P31270 Y_RNA.404-201ENST00000383978 102 ntBASIC2.96□□□□□ -1.94
HOXA11P31270 RNU6-1032P-201ENST00000384100 107 ntBASIC2.96□□□□□ -1.94
HOXA11P31270 Y_RNA.463-201ENST00000384271 102 ntBASIC2.96□□□□□ -1.94
HOXA11P31270 RNU2-33P-201ENST00000410344 192 ntBASIC2.96□□□□□ -1.94
HOXA11P31270 Y_RNA.594-201ENST00000410373 140 ntBASIC2.96□□□□□ -1.94
HOXA11P31270 RNU6-1050P-201ENST00000410388 107 ntBASIC2.96□□□□□ -1.94
HOXA11P31270 RNU6-293P-201ENST00000411259 106 ntBASIC2.96□□□□□ -1.94
HOXA11P31270 RNU6-1304P-201ENST00000411374 106 ntBASIC2.96□□□□□ -1.94
HOXA11P31270 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.96□□□□□ -1.94
HOXA11P31270 AL592045.1-201ENST00000429867 352 ntBASIC2.96□□□□□ -1.94
HOXA11P31270 GPM6BP2-201ENST00000432046 144 ntBASIC2.96□□□□□ -1.94
HOXA11P31270 MTND3P2-201ENST00000438452 342 ntBASIC2.96□□□□□ -1.94
HOXA11P31270 GPM6BP1-201ENST00000446387 144 ntBASIC2.96□□□□□ -1.94
HOXA11P31270 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.96□□□□□ -1.94
HOXA11P31270 RPL30P15-201ENST00000457129 321 ntBASIC2.96□□□□□ -1.94
HOXA11P31270 HMGB1P30-201ENST00000492455 606 ntBASIC2.96□□□□□ -1.94
HOXA11P31270 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.96□□□□□ -1.94
HOXA11P31270 RNU1-54P-201ENST00000517181 120 ntBASIC2.96□□□□□ -1.94
HOXA11P31270 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.96□□□□□ -1.94
HOXA11P31270 RNU6-988P-201ENST00000519081 107 ntBASIC2.96□□□□□ -1.94
HOXA11P31270 TRAV28-201ENST00000557548 323 ntBASIC2.96□□□□□ -1.94
HOXA11P31270 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.96□□□□□ -1.94
HOXA11P31270 AC103810.1-201ENST00000579873 453 ntBASIC2.96□□□□□ -1.94
HOXA11P31270 AC011494.1-201ENST00000596454 237 ntBASIC2.96□□□□□ -1.94
HOXA11P31270 AC009229.3-201ENST00000608056 282 ntBASIC2.96□□□□□ -1.94
HOXA11P31270 MIR6128-201ENST00000615528 109 ntBASIC2.96□□□□□ -1.94
HOXA11P31270 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.96□□□□□ -1.94
HOXA11P31270 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
HOXA11P31270 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
HOXA11P31270 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
HOXA11P31270 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
HOXA11P31270 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
HOXA11P31270 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
HOXA11P31270 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
HOXA11P31270 MIR26A1-201ENST00000362205 77 ntBASIC2.95□□□□□ -1.94
HOXA11P31270 RNU6-859P-201ENST00000362728 107 ntBASIC2.95□□□□□ -1.94
HOXA11P31270 U8.9-201ENST00000365667 134 ntBASIC2.95□□□□□ -1.94
HOXA11P31270 SNORA26.7-201ENST00000391288 122 ntBASIC2.95□□□□□ -1.94
HOXA11P31270 MIR887-201ENST00000401258 79 ntBASIC2.95□□□□□ -1.94
HOXA11P31270 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.95□□□□□ -1.94
HOXA11P31270 AL358176.2-201ENST00000425769 204 ntBASIC2.95□□□□□ -1.94
HOXA11P31270 AC009414.1-201ENST00000427200 443 ntBASIC2.95□□□□□ -1.94
HOXA11P31270 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.95□□□□□ -1.94
HOXA11P31270 PIGFP3-201ENST00000441918 722 ntBASIC2.95□□□□□ -1.94
HOXA11P31270 AC009296.1-201ENST00000443146 155 ntBASIC2.95□□□□□ -1.94
HOXA11P31270 RPL31P41-201ENST00000477967 372 ntBASIC2.95□□□□□ -1.94
HOXA11P31270 RNU1-86P-201ENST00000516108 154 ntBASIC2.95□□□□□ -1.94
HOXA11P31270 RNU1-107P-201ENST00000516617 154 ntBASIC2.95□□□□□ -1.94
HOXA11P31270 RN7SKP295-201ENST00000517264 153 ntBASIC2.95□□□□□ -1.94
HOXA11P31270 AC009902.1-201ENST00000519351 183 ntBASIC2.95□□□□□ -1.94
HOXA11P31270 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.95□□□□□ -1.94
HOXA11P31270 AC025423.5-201ENST00000550230 219 ntBASIC2.95□□□□□ -1.94
HOXA11P31270 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.95□□□□□ -1.94
HOXA11P31270 ELOCP5-201ENST00000604924 333 ntBASIC2.95□□□□□ -1.94
HOXA11P31270 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
HOXA11P31270 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.95□□□□□ -1.94
HOXA11P31270 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
HOXA11P31270 Y_RNA.33-201ENST00000362591 102 ntBASIC2.94□□□□□ -1.94
HOXA11P31270 RNU6-890P-201ENST00000384121 107 ntBASIC2.94□□□□□ -1.94
HOXA11P31270 SNORA41-201ENST00000384675 132 ntBASIC2.94□□□□□ -1.94
HOXA11P31270 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.94□□□□□ -1.94
HOXA11P31270 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.94□□□□□ -1.94
HOXA11P31270 MCFD2P1-201ENST00000417812 300 ntBASIC2.94□□□□□ -1.94
HOXA11P31270 USMG5P1-201ENST00000425964 177 ntBASIC2.94□□□□□ -1.94
HOXA11P31270 AC007919.1-201ENST00000429380 217 ntBASIC2.94□□□□□ -1.94
HOXA11P31270 ARL5AP4-201ENST00000430731 512 ntBASIC2.94□□□□□ -1.94
HOXA11P31270 MTND5P22-201ENST00000458380 195 ntBASIC2.94□□□□□ -1.94
HOXA11P31270 AL160314.1-201ENST00000490836 438 ntBASIC2.94□□□□□ -1.94
HOXA11P31270 RNU6-1213P-201ENST00000517075 94 ntBASIC2.94□□□□□ -1.94
HOXA11P31270 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.94□□□□□ -1.94
HOXA11P31270 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.94□□□□□ -1.94
HOXA11P31270 MIR4506-201ENST00000584693 77 ntBASIC2.94□□□□□ -1.94
HOXA11P31270 AC002545.1-201ENST00000592511 181 ntBASIC2.94□□□□□ -1.94
HOXA11P31270 AC005046.1-201ENST00000608515 625 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 160 ms