Protein–RNA interactions for Protein: P31268

HOXA7, Homeobox protein Hox-A7, humanhuman

Predicted RBP Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA7P31268 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.11□□□□□ -1.91
HOXA7P31268 RNU6-1213P-201ENST00000517075 94 ntBASIC3.11□□□□□ -1.91
HOXA7P31268 MIR3171-201ENST00000584270 74 ntBASIC3.11□□□□□ -1.91
HOXA7P31268 AL133393.1-201ENST00000603277 287 ntBASIC3.11□□□□□ -1.91
HOXA7P31268 AP000654.2-201ENST00000605633 586 ntBASIC3.11□□□□□ -1.91
HOXA7P31268 FTX_3.1-201ENST00000610451 147 ntBASIC3.11□□□□□ -1.91
HOXA7P31268 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.11□□□□□ -1.91
HOXA7P31268 AC027309.3-201ENST00000623419 351 ntBASIC3.11□□□□□ -1.91
HOXA7P31268 AC244517.12-201ENST00000623581 663 ntBASIC3.11□□□□□ -1.91
HOXA7P31268 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
HOXA7P31268 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HOXA7P31268 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HOXA7P31268 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HOXA7P31268 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
HOXA7P31268 Y_RNA.132-201ENST00000363421 102 ntBASIC3.1□□□□□ -1.91
HOXA7P31268 Y_RNA.197-201ENST00000364004 102 ntBASIC3.1□□□□□ -1.91
HOXA7P31268 RNU1-100P-201ENST00000365255 165 ntBASIC3.1□□□□□ -1.91
HOXA7P31268 Y_RNA.395-201ENST00000383945 109 ntBASIC3.1□□□□□ -1.91
HOXA7P31268 SNORD21-201ENST00000383953 95 ntBASIC3.1□□□□□ -1.91
HOXA7P31268 RNU6-306P-201ENST00000384617 107 ntBASIC3.1□□□□□ -1.91
HOXA7P31268 MIR559-201ENST00000385188 96 ntBASIC3.1□□□□□ -1.91
HOXA7P31268 AL512633.1-201ENST00000399931 655 ntBASIC3.1□□□□□ -1.91
HOXA7P31268 Y_RNA.594-201ENST00000410373 140 ntBASIC3.1□□□□□ -1.91
HOXA7P31268 Y_RNA.646-201ENST00000410980 101 ntBASIC3.1□□□□□ -1.91
HOXA7P31268 AC009963.1-201ENST00000417265 157 ntBASIC3.1□□□□□ -1.91
HOXA7P31268 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HOXA7P31268 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.1□□□□□ -1.91
HOXA7P31268 RPL12P25-201ENST00000455592 494 ntBASIC3.1□□□□□ -1.91
HOXA7P31268 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.1□□□□□ -1.91
HOXA7P31268 SNORD5.1-201ENST00000458800 75 ntBASIC3.1□□□□□ -1.91
HOXA7P31268 RNU7-187P-201ENST00000458985 68 ntBASIC3.1□□□□□ -1.91
HOXA7P31268 AC003982.1-202ENST00000469928 248 ntBASIC3.1□□□□□ -1.91
HOXA7P31268 RN7SL297P-201ENST00000483161 293 ntBASIC3.1□□□□□ -1.91
HOXA7P31268 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.1□□□□□ -1.91
HOXA7P31268 AC097473.1-201ENST00000508142 408 ntBASIC3.1□□□□□ -1.91
HOXA7P31268 Y_RNA.670-201ENST00000516255 105 ntBASIC3.1□□□□□ -1.91
HOXA7P31268 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HOXA7P31268 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.1□□□□□ -1.91
HOXA7P31268 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.1□□□□□ -1.91
HOXA7P31268 SNRPGP17-201ENST00000603780 214 ntBASIC3.1□□□□□ -1.91
HOXA7P31268 AP000787.2-201ENST00000604432 568 ntBASIC3.1□□□□□ -1.91
HOXA7P31268 AC009229.3-201ENST00000608056 282 ntBASIC3.1□□□□□ -1.91
HOXA7P31268 AC019193.3-201ENST00000609144 554 ntBASIC3.1□□□□□ -1.91
HOXA7P31268 PART1_1.1-201ENST00000611761 217 ntBASIC3.1□□□□□ -1.91
HOXA7P31268 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.1□□□□□ -1.91
HOXA7P31268 Z69720.2-201ENST00000624755 279 ntBASIC3.1□□□□□ -1.91
HOXA7P31268 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.1□□□□□ -1.91
HOXA7P31268 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HOXA7P31268 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HOXA7P31268 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.1□□□□□ -1.91
HOXA7P31268 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.09□□□□□ -1.91
HOXA7P31268 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.09□□□□□ -1.91
HOXA7P31268 RNU6-37P-201ENST00000362692 107 ntBASIC3.09□□□□□ -1.91
HOXA7P31268 Y_RNA.162-201ENST00000363683 102 ntBASIC3.09□□□□□ -1.91
HOXA7P31268 RNU6-11P-201ENST00000364234 107 ntBASIC3.09□□□□□ -1.91
HOXA7P31268 RNU6-25P-201ENST00000383873 107 ntBASIC3.09□□□□□ -1.91
HOXA7P31268 RNU6-1-201ENST00000383898 107 ntBASIC3.09□□□□□ -1.91
HOXA7P31268 RNU6-48P-201ENST00000384161 107 ntBASIC3.09□□□□□ -1.91
HOXA7P31268 Y_RNA.445-201ENST00000384168 102 ntBASIC3.09□□□□□ -1.91
HOXA7P31268 RNU6-36P-201ENST00000384172 107 ntBASIC3.09□□□□□ -1.91
HOXA7P31268 RNU6-4P-201ENST00000384205 107 ntBASIC3.09□□□□□ -1.91
HOXA7P31268 SNORA70B-201ENST00000384210 135 ntBASIC3.09□□□□□ -1.91
HOXA7P31268 RNU6-5P-201ENST00000384238 107 ntBASIC3.09□□□□□ -1.91
HOXA7P31268 RNU6-3P-201ENST00000384314 107 ntBASIC3.09□□□□□ -1.91
HOXA7P31268 RNU6-16P-201ENST00000384385 107 ntBASIC3.09□□□□□ -1.91
HOXA7P31268 RNU6-15P-201ENST00000384534 107 ntBASIC3.09□□□□□ -1.91
HOXA7P31268 RNU6-2-201ENST00000384627 107 ntBASIC3.09□□□□□ -1.91
HOXA7P31268 RNU6-29P-201ENST00000384637 107 ntBASIC3.09□□□□□ -1.91
HOXA7P31268 RNU6-9-201ENST00000384776 107 ntBASIC3.09□□□□□ -1.91
HOXA7P31268 RNU6-33P-201ENST00000384793 107 ntBASIC3.09□□□□□ -1.91
HOXA7P31268 MIR181A2-201ENST00000384863 110 ntBASIC3.09□□□□□ -1.91
HOXA7P31268 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.09□□□□□ -1.91
HOXA7P31268 Z82205.1-201ENST00000428456 297 ntBASIC3.09□□□□□ -1.91
HOXA7P31268 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.09□□□□□ -1.91
HOXA7P31268 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.09□□□□□ -1.91
HOXA7P31268 AC109329.2-201ENST00000519658 482 ntBASIC3.09□□□□□ -1.91
HOXA7P31268 AL355598.1-201ENST00000604169 202 ntBASIC3.09□□□□□ -1.91
HOXA7P31268 RNU6-6P-201ENST00000606623 107 ntBASIC3.09□□□□□ -1.91
HOXA7P31268 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.09□□□□□ -1.91
HOXA7P31268 CTSLP2-204ENST00000629029 392 ntBASIC3.09□□□□□ -1.91
HOXA7P31268 U6.99-201ENST00000637524 83 ntBASIC3.09□□□□□ -1.91
HOXA7P31268 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.09□□□□□ -1.91
HOXA7P31268 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.08□□□□□ -1.92
HOXA7P31268 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.08□□□□□ -1.92
HOXA7P31268 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
HOXA7P31268 CUL1P1-201ENST00000509510 2425 ntBASIC3.08□□□□□ -1.92
HOXA7P31268 Y_RNA.151-201ENST00000363566 112 ntBASIC3.08□□□□□ -1.92
HOXA7P31268 RNU6-692P-201ENST00000384496 107 ntBASIC3.08□□□□□ -1.92
HOXA7P31268 RNU6-1106P-201ENST00000390845 107 ntBASIC3.08□□□□□ -1.92
HOXA7P31268 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.08□□□□□ -1.92
HOXA7P31268 SNORD56-201ENST00000413522 71 ntBASIC3.08□□□□□ -1.92
HOXA7P31268 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HOXA7P31268 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.08□□□□□ -1.92
HOXA7P31268 USP9YP30-201ENST00000430729 455 ntBASIC3.08□□□□□ -1.92
HOXA7P31268 PCMTD1P1-201ENST00000455560 355 ntBASIC3.08□□□□□ -1.92
HOXA7P31268 AC090096.1-201ENST00000489168 390 ntBASIC3.08□□□□□ -1.92
HOXA7P31268 AC018437.1-201ENST00000492214 406 ntBASIC3.08□□□□□ -1.92
HOXA7P31268 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.08□□□□□ -1.92
HOXA7P31268 RNA5SP76-201ENST00000516277 87 ntBASIC3.08□□□□□ -1.92
HOXA7P31268 RNU6-703P-201ENST00000516946 107 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms