Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 RNU6-266P-201ENST00000364225 107 ntBASIC2.49□□□□□ -2.01
BDNFP23560 RNA5SP212-201ENST00000391223 107 ntBASIC2.49□□□□□ -2.01
BDNFP23560 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.49□□□□□ -2.01
BDNFP23560 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.49□□□□□ -2.01
BDNFP23560 AC244670.1-201ENST00000436879 112 ntBASIC2.49□□□□□ -2.01
BDNFP23560 RPS12P2-201ENST00000439728 269 ntBASIC2.49□□□□□ -2.01
BDNFP23560 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.49□□□□□ -2.01
BDNFP23560 AL031274.1-201ENST00000450334 232 ntBASIC2.49□□□□□ -2.01
BDNFP23560 RPL23AP3-201ENST00000453844 468 ntBASIC2.49□□□□□ -2.01
BDNFP23560 RPS3AP17-201ENST00000472594 777 ntBASIC2.49□□□□□ -2.01
BDNFP23560 AK3P2-201ENST00000507976 429 ntBASIC2.49□□□□□ -2.01
BDNFP23560 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.49□□□□□ -2.01
BDNFP23560 RNU6-965P-201ENST00000516721 96 ntBASIC2.49□□□□□ -2.01
BDNFP23560 AP005435.4-201ENST00000529514 284 ntBASIC2.49□□□□□ -2.01
BDNFP23560 AC022880.1-201ENST00000534017 973 ntBASIC2.49□□□□□ -2.01
BDNFP23560 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.49□□□□□ -2.01
BDNFP23560 MIR4298-201ENST00000584380 73 ntBASIC2.49□□□□□ -2.01
BDNFP23560 AL096840.1-201ENST00000603287 93 ntBASIC2.49□□□□□ -2.01
BDNFP23560 AL022345.1-201ENST00000607292 135 ntBASIC2.49□□□□□ -2.01
BDNFP23560 AC067747.1-201ENST00000608026 250 ntBASIC2.49□□□□□ -2.01
BDNFP23560 AC063943.3-201ENST00000615562 356 ntBASIC2.49□□□□□ -2.01
BDNFP23560 SNORD98-201ENST00000636377 67 ntBASIC2.49□□□□□ -2.01
BDNFP23560 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
BDNFP23560 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
BDNFP23560 MIR21-201ENST00000362134 72 ntBASIC2.48□□□□□ -2.01
BDNFP23560 RNU6-336P-201ENST00000364891 107 ntBASIC2.48□□□□□ -2.01
BDNFP23560 Y_RNA.296-201ENST00000364930 108 ntBASIC2.48□□□□□ -2.01
BDNFP23560 RNU6-996P-201ENST00000365438 107 ntBASIC2.48□□□□□ -2.01
BDNFP23560 RNU6-1103P-201ENST00000384150 107 ntBASIC2.48□□□□□ -2.01
BDNFP23560 RNU6-348P-201ENST00000384386 107 ntBASIC2.48□□□□□ -2.01
BDNFP23560 RNU6-903P-201ENST00000391270 109 ntBASIC2.48□□□□□ -2.01
BDNFP23560 RPS29P13-201ENST00000402041 169 ntBASIC2.48□□□□□ -2.01
BDNFP23560 SNORA3.2-201ENST00000408221 125 ntBASIC2.48□□□□□ -2.01
BDNFP23560 POLHP1-201ENST00000411806 470 ntBASIC2.48□□□□□ -2.01
BDNFP23560 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
BDNFP23560 MTATP6P17-201ENST00000431030 672 ntBASIC2.48□□□□□ -2.01
BDNFP23560 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.48□□□□□ -2.01
BDNFP23560 RNU6-333P-201ENST00000459117 107 ntBASIC2.48□□□□□ -2.01
BDNFP23560 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.48□□□□□ -2.01
BDNFP23560 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.48□□□□□ -2.01
BDNFP23560 RNU6-567P-201ENST00000516746 107 ntBASIC2.48□□□□□ -2.01
BDNFP23560 SNORA25.17-201ENST00000517184 124 ntBASIC2.48□□□□□ -2.01
BDNFP23560 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.48□□□□□ -2.01
BDNFP23560 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.48□□□□□ -2.01
BDNFP23560 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.48□□□□□ -2.01
BDNFP23560 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.48□□□□□ -2.01
BDNFP23560 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.48□□□□□ -2.01
BDNFP23560 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.48□□□□□ -2.01
BDNFP23560 AC136475.10-201ENST00000620253 385 ntBASIC2.48□□□□□ -2.01
BDNFP23560 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
BDNFP23560 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.48□□□□□ -2.01
BDNFP23560 RNA5SP276-201ENST00000362580 94 ntBASIC2.47□□□□□ -2.01
BDNFP23560 RNU6-1042P-201ENST00000384204 107 ntBASIC2.47□□□□□ -2.01
BDNFP23560 RN7SKP61-201ENST00000410642 295 ntBASIC2.47□□□□□ -2.01
BDNFP23560 Z98742.3-201ENST00000418637 326 ntBASIC2.47□□□□□ -2.01
BDNFP23560 AC096920.1-201ENST00000423991 241 ntBASIC2.47□□□□□ -2.01
BDNFP23560 AC002486.1-201ENST00000435098 391 ntBASIC2.47□□□□□ -2.01
BDNFP23560 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.47□□□□□ -2.01
BDNFP23560 SNRPGP7-201ENST00000469016 106 ntBASIC2.47□□□□□ -2.01
BDNFP23560 ANXA2P1-201ENST00000505539 926 ntBASIC2.47□□□□□ -2.01
BDNFP23560 HMGB1P29-201ENST00000505659 499 ntBASIC2.47□□□□□ -2.01
BDNFP23560 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.47□□□□□ -2.01
BDNFP23560 MTND4P7-201ENST00000523876 130 ntBASIC2.47□□□□□ -2.01
BDNFP23560 PRELID2P1-201ENST00000552837 301 ntBASIC2.47□□□□□ -2.01
BDNFP23560 AC002044.1-201ENST00000606707 158 ntBASIC2.47□□□□□ -2.01
BDNFP23560 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
BDNFP23560 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.47□□□□□ -2.01
BDNFP23560 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
BDNFP23560 RNU6-743P-201ENST00000364151 106 ntBASIC2.46□□□□□ -2.02
BDNFP23560 RNU6-43P-201ENST00000384302 107 ntBASIC2.46□□□□□ -2.02
BDNFP23560 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
BDNFP23560 RNU11-3P-201ENST00000391111 133 ntBASIC2.46□□□□□ -2.02
BDNFP23560 RNA5SP181-201ENST00000410246 98 ntBASIC2.46□□□□□ -2.02
BDNFP23560 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.46□□□□□ -2.02
BDNFP23560 AL117339.3-201ENST00000418733 162 ntBASIC2.46□□□□□ -2.02
BDNFP23560 AC244636.1-201ENST00000421152 228 ntBASIC2.46□□□□□ -2.02
BDNFP23560 AC010975.2-201ENST00000427781 588 ntBASIC2.46□□□□□ -2.02
BDNFP23560 VN1R108P-201ENST00000431580 830 ntBASIC2.46□□□□□ -2.02
BDNFP23560 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC2.46□□□□□ -2.02
BDNFP23560 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.46□□□□□ -2.02
BDNFP23560 RPL31P3-201ENST00000458430 332 ntBASIC2.46□□□□□ -2.02
BDNFP23560 AC016632.1-201ENST00000503994 196 ntBASIC2.46□□□□□ -2.02
BDNFP23560 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.46□□□□□ -2.02
BDNFP23560 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.46□□□□□ -2.02
BDNFP23560 HIF1AP1-201ENST00000553642 175 ntBASIC2.46□□□□□ -2.02
BDNFP23560 MIR4299-201ENST00000577899 72 ntBASIC2.46□□□□□ -2.02
BDNFP23560 MIR3945-201ENST00000581853 98 ntBASIC2.46□□□□□ -2.02
BDNFP23560 AC012507.3-201ENST00000603556 477 ntBASIC2.46□□□□□ -2.02
BDNFP23560 APOOP1-201ENST00000604695 592 ntBASIC2.46□□□□□ -2.02
BDNFP23560 AL773524.1-201ENST00000614065 229 ntBASIC2.46□□□□□ -2.02
BDNFP23560 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
BDNFP23560 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.46□□□□□ -2.02
BDNFP23560 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.45□□□□□ -2.02
BDNFP23560 AC009487.4-201ENST00000624969 3585 ntBASIC2.45□□□□□ -2.02
BDNFP23560 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.45□□□□□ -2.02
BDNFP23560 AL359851.1-201ENST00000569460 4997 ntBASIC2.45□□□□□ -2.02
BDNFP23560 MIR6073-201ENST00000352083 89 ntBASIC2.45□□□□□ -2.02
BDNFP23560 RNU1-58P-201ENST00000362413 163 ntBASIC2.45□□□□□ -2.02
BDNFP23560 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
BDNFP23560 MIR1262-201ENST00000408276 93 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms