Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
CAPN3P20807 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.6□□□□□ -1.99
CAPN3P20807 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.6□□□□□ -1.99
CAPN3P20807 AC092268.1-201ENST00000342691 405 ntBASIC2.6□□□□□ -1.99
CAPN3P20807 snoU2_19.1-201ENST00000362361 80 ntBASIC2.6□□□□□ -1.99
CAPN3P20807 RNU6-1274P-201ENST00000384557 107 ntBASIC2.6□□□□□ -1.99
CAPN3P20807 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.6□□□□□ -1.99
CAPN3P20807 HMGB3P2-201ENST00000411913 584 ntBASIC2.6□□□□□ -1.99
CAPN3P20807 EDDM3CP-201ENST00000415977 425 ntBASIC2.6□□□□□ -1.99
CAPN3P20807 AC078809.1-201ENST00000427601 140 ntBASIC2.6□□□□□ -1.99
CAPN3P20807 DLGAP5P1-201ENST00000430307 464 ntBASIC2.6□□□□□ -1.99
CAPN3P20807 AC087499.2-201ENST00000432861 149 ntBASIC2.6□□□□□ -1.99
CAPN3P20807 AC244670.1-201ENST00000436879 112 ntBASIC2.6□□□□□ -1.99
CAPN3P20807 USP9YP8-201ENST00000441913 500 ntBASIC2.6□□□□□ -1.99
CAPN3P20807 snoU13.26-201ENST00000459452 105 ntBASIC2.6□□□□□ -1.99
CAPN3P20807 RNU6-1208P-201ENST00000459588 107 ntBASIC2.6□□□□□ -1.99
CAPN3P20807 SNRPGP7-201ENST00000469016 106 ntBASIC2.6□□□□□ -1.99
CAPN3P20807 RPS29P26-201ENST00000477483 171 ntBASIC2.6□□□□□ -1.99
CAPN3P20807 AC090525.1-201ENST00000479116 478 ntBASIC2.6□□□□□ -1.99
CAPN3P20807 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC2.6□□□□□ -1.99
CAPN3P20807 SNORA19.2-201ENST00000516013 114 ntBASIC2.6□□□□□ -1.99
CAPN3P20807 RNU6-826P-201ENST00000516827 104 ntBASIC2.6□□□□□ -1.99
CAPN3P20807 RNA5SP137-201ENST00000516833 135 ntBASIC2.6□□□□□ -1.99
CAPN3P20807 AC034114.1-201ENST00000520293 285 ntBASIC2.6□□□□□ -1.99
CAPN3P20807 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.6□□□□□ -1.99
CAPN3P20807 AL157687.1-201ENST00000554853 619 ntBASIC2.6□□□□□ -1.99
CAPN3P20807 AC103996.1-201ENST00000555468 102 ntBASIC2.6□□□□□ -1.99
CAPN3P20807 AL049779.4-201ENST00000604500 156 ntBASIC2.6□□□□□ -1.99
CAPN3P20807 YWHAEP7-203ENST00000622054 312 ntBASIC2.6□□□□□ -1.99
CAPN3P20807 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
CAPN3P20807 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.6□□□□□ -1.99
CAPN3P20807 RNU1-23P-201ENST00000363361 144 ntBASIC2.59□□□□□ -1.99
CAPN3P20807 RNU6-1285P-201ENST00000363480 105 ntBASIC2.59□□□□□ -1.99
CAPN3P20807 SNORA3A-201ENST00000364113 130 ntBASIC2.59□□□□□ -1.99
CAPN3P20807 RNU4-75P-201ENST00000364621 146 ntBASIC2.59□□□□□ -1.99
CAPN3P20807 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
CAPN3P20807 EIF4E2P1-201ENST00000393781 255 ntBASIC2.59□□□□□ -1.99
CAPN3P20807 AL591034.2-201ENST00000402839 359 ntBASIC2.59□□□□□ -1.99
CAPN3P20807 AL590002.1-201ENST00000406554 418 ntBASIC2.59□□□□□ -1.99
CAPN3P20807 RNU2-32P-201ENST00000411193 191 ntBASIC2.59□□□□□ -1.99
CAPN3P20807 CBX3P6-201ENST00000430257 527 ntBASIC2.59□□□□□ -1.99
CAPN3P20807 IFNA11P-201ENST00000446352 526 ntBASIC2.59□□□□□ -1.99
CAPN3P20807 AC245102.2-201ENST00000448956 180 ntBASIC2.59□□□□□ -1.99
CAPN3P20807 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.59□□□□□ -1.99
CAPN3P20807 MTND3P16-201ENST00000452205 344 ntBASIC2.59□□□□□ -1.99
CAPN3P20807 AP000705.1-201ENST00000454567 350 ntBASIC2.59□□□□□ -1.99
CAPN3P20807 RNU6-1037P-201ENST00000459571 107 ntBASIC2.59□□□□□ -1.99
CAPN3P20807 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.59□□□□□ -1.99
CAPN3P20807 AC016632.1-201ENST00000503994 196 ntBASIC2.59□□□□□ -1.99
CAPN3P20807 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.59□□□□□ -1.99
CAPN3P20807 RN7SKP132-201ENST00000516001 208 ntBASIC2.59□□□□□ -1.99
CAPN3P20807 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.59□□□□□ -1.99
CAPN3P20807 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.59□□□□□ -1.99
CAPN3P20807 RNU6-323P-201ENST00000521915 107 ntBASIC2.59□□□□□ -1.99
CAPN3P20807 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.59□□□□□ -1.99
CAPN3P20807 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.59□□□□□ -1.99
CAPN3P20807 NDUFA5P6-201ENST00000542110 379 ntBASIC2.59□□□□□ -1.99
CAPN3P20807 AC018630.3-201ENST00000542637 96 ntBASIC2.59□□□□□ -1.99
CAPN3P20807 ZNF519P2-201ENST00000557032 169 ntBASIC2.59□□□□□ -1.99
CAPN3P20807 MIR4769-201ENST00000584126 77 ntBASIC2.59□□□□□ -1.99
CAPN3P20807 SNRPGP17-201ENST00000603780 214 ntBASIC2.59□□□□□ -1.99
CAPN3P20807 AL034555.1-201ENST00000604816 211 ntBASIC2.59□□□□□ -1.99
CAPN3P20807 AL357078.3-201ENST00000607528 618 ntBASIC2.59□□□□□ -1.99
CAPN3P20807 AC069528.2-201ENST00000624849 1991 ntBASIC2.59□□□□□ -2
CAPN3P20807 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
CAPN3P20807 SNORA25.6-201ENST00000364121 118 ntBASIC2.58□□□□□ -2
CAPN3P20807 Y_RNA.231-201ENST00000364358 102 ntBASIC2.58□□□□□ -2
CAPN3P20807 RNU6-43P-201ENST00000384302 107 ntBASIC2.58□□□□□ -2
CAPN3P20807 RNU6-692P-201ENST00000384496 107 ntBASIC2.58□□□□□ -2
CAPN3P20807 RN7SKP61-201ENST00000410642 295 ntBASIC2.58□□□□□ -2
CAPN3P20807 SNAP23P1-201ENST00000433229 246 ntBASIC2.58□□□□□ -2
CAPN3P20807 AC108938.1-201ENST00000451204 136 ntBASIC2.58□□□□□ -2
CAPN3P20807 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.58□□□□□ -2
CAPN3P20807 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.58□□□□□ -2
CAPN3P20807 HMGB3P3-201ENST00000510526 400 ntBASIC2.58□□□□□ -2
CAPN3P20807 SNORA4.4-201ENST00000515921 135 ntBASIC2.58□□□□□ -2
CAPN3P20807 RNU5F-2P-201ENST00000516066 82 ntBASIC2.58□□□□□ -2
CAPN3P20807 AC022616.8-201ENST00000533569 253 ntBASIC2.58□□□□□ -2
CAPN3P20807 HSPE1P4-201ENST00000550617 308 ntBASIC2.58□□□□□ -2
CAPN3P20807 AC007375.1-201ENST00000554513 578 ntBASIC2.58□□□□□ -2
CAPN3P20807 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.58□□□□□ -2
CAPN3P20807 AC018889.1-201ENST00000605372 397 ntBASIC2.58□□□□□ -2
CAPN3P20807 AC092807.2-201ENST00000609367 243 ntBASIC2.58□□□□□ -2
CAPN3P20807 AC010297.1-201ENST00000623948 149 ntBASIC2.58□□□□□ -2
CAPN3P20807 SNORD98-201ENST00000636377 67 ntBASIC2.58□□□□□ -2
CAPN3P20807 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.58□□□□□ -2
CAPN3P20807 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.58□□□□□ -2
CAPN3P20807 OR4G1P-203ENST00000641984 1631 ntBASIC2.57□□□□□ -2
CAPN3P20807 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.57□□□□□ -2
CAPN3P20807 Y_RNA.372-201ENST00000365599 102 ntBASIC2.57□□□□□ -2
CAPN3P20807 Y_RNA.378-201ENST00000365652 113 ntBASIC2.57□□□□□ -2
CAPN3P20807 RNU6-142P-201ENST00000384019 107 ntBASIC2.57□□□□□ -2
CAPN3P20807 RNU6-214P-201ENST00000384130 107 ntBASIC2.57□□□□□ -2
CAPN3P20807 MIR514A2-201ENST00000385131 88 ntBASIC2.57□□□□□ -2
CAPN3P20807 MIR514A3-201ENST00000385132 88 ntBASIC2.57□□□□□ -2
CAPN3P20807 AL356057.3-201ENST00000402607 340 ntBASIC2.57□□□□□ -2
CAPN3P20807 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC2.57□□□□□ -2
CAPN3P20807 USP9YP27-201ENST00000418455 438 ntBASIC2.57□□□□□ -2
CAPN3P20807 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.57□□□□□ -2
CAPN3P20807 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 140.8 ms