Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 RNU1-123P-201ENST00000458950 160 ntBASIC1.17□□□□□ -2.22
CTLA4P16410 RPL30P12-201ENST00000474666 353 ntBASIC1.17□□□□□ -2.22
CTLA4P16410 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.17□□□□□ -2.22
CTLA4P16410 TPT1P8-201ENST00000510120 555 ntBASIC1.17□□□□□ -2.22
CTLA4P16410 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.17□□□□□ -2.22
CTLA4P16410 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.17□□□□□ -2.22
CTLA4P16410 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.17□□□□□ -2.22
CTLA4P16410 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.17□□□□□ -2.22
CTLA4P16410 AP005597.4-201ENST00000526762 229 ntBASIC1.17□□□□□ -2.22
CTLA4P16410 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC1.17□□□□□ -2.22
CTLA4P16410 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC1.17□□□□□ -2.22
CTLA4P16410 RPL21P5-201ENST00000554662 472 ntBASIC1.17□□□□□ -2.22
CTLA4P16410 AC091135.1-201ENST00000585943 307 ntBASIC1.17□□□□□ -2.22
CTLA4P16410 BNIP3P39-201ENST00000601077 554 ntBASIC1.17□□□□□ -2.22
CTLA4P16410 AC078795.2-201ENST00000602835 1252 ntBASIC1.17□□□□□ -2.22
CTLA4P16410 WISP1-OT1-201ENST00000602893 642 ntBASIC1.17□□□□□ -2.22
CTLA4P16410 AC091304.9-201ENST00000612091 226 ntBASIC1.17□□□□□ -2.22
CTLA4P16410 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.17□□□□□ -2.22
CTLA4P16410 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.17□□□□□ -2.22
CTLA4P16410 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.17□□□□□ -2.22
CTLA4P16410 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.17□□□□□ -2.22
CTLA4P16410 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
CTLA4P16410 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
CTLA4P16410 RNU6-661P-201ENST00000362409 107 ntBASIC1.16□□□□□ -2.22
CTLA4P16410 RNU6-179P-201ENST00000363350 107 ntBASIC1.16□□□□□ -2.22
CTLA4P16410 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.16□□□□□ -2.22
CTLA4P16410 SNORA48.1-201ENST00000390879 135 ntBASIC1.16□□□□□ -2.22
CTLA4P16410 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.16□□□□□ -2.22
CTLA4P16410 BTF3L4P2-201ENST00000392798 346 ntBASIC1.16□□□□□ -2.22
CTLA4P16410 Y_RNA.597-201ENST00000410463 100 ntBASIC1.16□□□□□ -2.22
CTLA4P16410 RNU6-607P-201ENST00000411283 108 ntBASIC1.16□□□□□ -2.22
CTLA4P16410 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.16□□□□□ -2.22
CTLA4P16410 CALM2P2-201ENST00000428512 440 ntBASIC1.16□□□□□ -2.22
CTLA4P16410 TAF9P1-201ENST00000445421 515 ntBASIC1.16□□□□□ -2.22
CTLA4P16410 RPL39P29-201ENST00000447779 157 ntBASIC1.16□□□□□ -2.22
CTLA4P16410 TAF9P2-201ENST00000454958 515 ntBASIC1.16□□□□□ -2.22
CTLA4P16410 RPS29P23-201ENST00000458635 123 ntBASIC1.16□□□□□ -2.22
CTLA4P16410 AC004223.1-201ENST00000479840 271 ntBASIC1.16□□□□□ -2.22
CTLA4P16410 MTND2P33-201ENST00000506452 1031 ntBASIC1.16□□□□□ -2.22
CTLA4P16410 AC093259.1-201ENST00000509755 300 ntBASIC1.16□□□□□ -2.22
CTLA4P16410 RNU6-965P-201ENST00000516721 96 ntBASIC1.16□□□□□ -2.22
CTLA4P16410 RNU1-92P-201ENST00000517017 135 ntBASIC1.16□□□□□ -2.22
CTLA4P16410 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.16□□□□□ -2.22
CTLA4P16410 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.16□□□□□ -2.22
CTLA4P16410 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.16□□□□□ -2.22
CTLA4P16410 DNAJC19P9-201ENST00000555084 351 ntBASIC1.16□□□□□ -2.22
CTLA4P16410 AC137800.2-201ENST00000574375 120 ntBASIC1.16□□□□□ -2.22
CTLA4P16410 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.16□□□□□ -2.22
CTLA4P16410 AL353997.5-201ENST00000618886 171 ntBASIC1.16□□□□□ -2.22
CTLA4P16410 AC138649.3-201ENST00000622154 254 ntBASIC1.16□□□□□ -2.22
CTLA4P16410 AL359740.1-201ENST00000624340 592 ntBASIC1.16□□□□□ -2.22
CTLA4P16410 AC019226.2-201ENST00000625973 424 ntBASIC1.16□□□□□ -2.22
CTLA4P16410 AL161722.3-201ENST00000605789 2983 ntBASIC1.15□□□□□ -2.22
CTLA4P16410 CBX3P1-201ENST00000325243 554 ntBASIC1.15□□□□□ -2.23
CTLA4P16410 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
CTLA4P16410 RNU5F-7P-201ENST00000363696 115 ntBASIC1.15□□□□□ -2.23
CTLA4P16410 RNU5E-7P-201ENST00000365290 117 ntBASIC1.15□□□□□ -2.23
CTLA4P16410 SNORA20.2-201ENST00000383922 131 ntBASIC1.15□□□□□ -2.23
CTLA4P16410 RNU4-62P-201ENST00000410125 130 ntBASIC1.15□□□□□ -2.23
CTLA4P16410 RNU2-3P-201ENST00000410144 191 ntBASIC1.15□□□□□ -2.23
CTLA4P16410 RNA5SP100-201ENST00000410903 110 ntBASIC1.15□□□□□ -2.23
CTLA4P16410 RNA5SP59-201ENST00000410922 110 ntBASIC1.15□□□□□ -2.23
CTLA4P16410 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.15□□□□□ -2.23
CTLA4P16410 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.15□□□□□ -2.23
CTLA4P16410 AL593851.1-201ENST00000426171 157 ntBASIC1.15□□□□□ -2.23
CTLA4P16410 AL591043.1-201ENST00000432461 424 ntBASIC1.15□□□□□ -2.23
CTLA4P16410 MTATP6P16-201ENST00000434543 526 ntBASIC1.15□□□□□ -2.23
CTLA4P16410 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.15□□□□□ -2.23
CTLA4P16410 AL357134.1-201ENST00000445848 426 ntBASIC1.15□□□□□ -2.23
CTLA4P16410 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.15□□□□□ -2.23
CTLA4P16410 EPS15P1-201ENST00000448836 336 ntBASIC1.15□□□□□ -2.23
CTLA4P16410 ZNF114P1-201ENST00000453500 292 ntBASIC1.15□□□□□ -2.23
CTLA4P16410 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC1.15□□□□□ -2.23
CTLA4P16410 AC116562.3-201ENST00000506136 177 ntBASIC1.15□□□□□ -2.23
CTLA4P16410 MTND3P25-201ENST00000509243 135 ntBASIC1.15□□□□□ -2.23
CTLA4P16410 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.15□□□□□ -2.23
CTLA4P16410 COPS8P3-201ENST00000526024 482 ntBASIC1.15□□□□□ -2.23
CTLA4P16410 AC068587.5-201ENST00000528506 175 ntBASIC1.15□□□□□ -2.23
CTLA4P16410 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.15□□□□□ -2.23
CTLA4P16410 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.15□□□□□ -2.23
CTLA4P16410 AC022022.2-201ENST00000602989 360 ntBASIC1.15□□□□□ -2.23
CTLA4P16410 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.15□□□□□ -2.23
CTLA4P16410 AC131159.1-201ENST00000621854 213 ntBASIC1.15□□□□□ -2.23
CTLA4P16410 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.15□□□□□ -2.23
CTLA4P16410 AC068787.1-201ENST00000623908 691 ntBASIC1.15□□□□□ -2.23
CTLA4P16410 MIR1248-201ENST00000629190 106 ntBASIC1.15□□□□□ -2.23
CTLA4P16410 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
CTLA4P16410 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
CTLA4P16410 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
CTLA4P16410 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.14□□□□□ -2.23
CTLA4P16410 RNU6-743P-201ENST00000364151 106 ntBASIC1.14□□□□□ -2.23
CTLA4P16410 SNORA62.1-201ENST00000364287 154 ntBASIC1.14□□□□□ -2.23
CTLA4P16410 RNU6-169P-201ENST00000365336 107 ntBASIC1.14□□□□□ -2.23
CTLA4P16410 RNU6-1222P-201ENST00000384615 107 ntBASIC1.14□□□□□ -2.23
CTLA4P16410 Y_RNA.576-201ENST00000384781 102 ntBASIC1.14□□□□□ -2.23
CTLA4P16410 Y_RNA.598-201ENST00000410480 95 ntBASIC1.14□□□□□ -2.23
CTLA4P16410 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.14□□□□□ -2.23
CTLA4P16410 Z99497.1-201ENST00000421282 135 ntBASIC1.14□□□□□ -2.23
CTLA4P16410 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.14□□□□□ -2.23
CTLA4P16410 AC000111.3-201ENST00000433478 193 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 132.5 ms