Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 Y_RNA.497-201ENST00000384447 98 ntBASIC4.31□□□□□ -1.72
HOXD8P13378 MIR7-3-201ENST00000384898 110 ntBASIC4.31□□□□□ -1.72
HOXD8P13378 U3.19-201ENST00000390893 196 ntBASIC4.31□□□□□ -1.72
HOXD8P13378 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC4.31□□□□□ -1.72
HOXD8P13378 AC074117.2-201ENST00000417130 397 ntBASIC4.31□□□□□ -1.72
HOXD8P13378 AL139247.1-201ENST00000422768 325 ntBASIC4.31□□□□□ -1.72
HOXD8P13378 OOSP1P1-201ENST00000423265 274 ntBASIC4.31□□□□□ -1.72
HOXD8P13378 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.31□□□□□ -1.72
HOXD8P13378 HLA-N-201ENST00000437516 135 ntBASIC4.31□□□□□ -1.72
HOXD8P13378 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC4.31□□□□□ -1.72
HOXD8P13378 HMGB3P8-201ENST00000449709 577 ntBASIC4.31□□□□□ -1.72
HOXD8P13378 PPBPP1-201ENST00000510807 373 ntBASIC4.31□□□□□ -1.72
HOXD8P13378 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC4.31□□□□□ -1.72
HOXD8P13378 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.31□□□□□ -1.72
HOXD8P13378 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.31□□□□□ -1.72
HOXD8P13378 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
HOXD8P13378 SRP72P2-201ENST00000344851 1979 ntBASIC4.31□□□□□ -1.72
HOXD8P13378 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.31□□□□□ -1.72
HOXD8P13378 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.31□□□□□ -1.72
HOXD8P13378 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.3□□□□□ -1.72
HOXD8P13378 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
HOXD8P13378 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.3□□□□□ -1.72
HOXD8P13378 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HOXD8P13378 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HOXD8P13378 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
HOXD8P13378 RNU6-1141P-201ENST00000364520 107 ntBASIC4.3□□□□□ -1.72
HOXD8P13378 RNU6-1280P-201ENST00000365211 107 ntBASIC4.3□□□□□ -1.72
HOXD8P13378 RNU6-1130P-201ENST00000365434 107 ntBASIC4.3□□□□□ -1.72
HOXD8P13378 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
HOXD8P13378 RNU6-449P-201ENST00000383914 107 ntBASIC4.3□□□□□ -1.72
HOXD8P13378 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.3□□□□□ -1.72
HOXD8P13378 AC092047.1-201ENST00000424997 240 ntBASIC4.3□□□□□ -1.72
HOXD8P13378 RPL30P5-201ENST00000494923 336 ntBASIC4.3□□□□□ -1.72
HOXD8P13378 HMGB3P3-201ENST00000510526 400 ntBASIC4.3□□□□□ -1.72
HOXD8P13378 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.3□□□□□ -1.72
HOXD8P13378 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC4.3□□□□□ -1.72
HOXD8P13378 RNU6-313P-201ENST00000516317 112 ntBASIC4.3□□□□□ -1.72
HOXD8P13378 RNA5SP164-201ENST00000516533 110 ntBASIC4.3□□□□□ -1.72
HOXD8P13378 AC021231.3-201ENST00000558497 370 ntBASIC4.3□□□□□ -1.72
HOXD8P13378 MIR5571-201ENST00000577998 113 ntBASIC4.3□□□□□ -1.72
HOXD8P13378 MIR3145-201ENST00000580727 82 ntBASIC4.3□□□□□ -1.72
HOXD8P13378 AC022441.3-201ENST00000605737 136 ntBASIC4.3□□□□□ -1.72
HOXD8P13378 AC048347.1-201ENST00000624621 427 ntBASIC4.3□□□□□ -1.72
HOXD8P13378 AL034408.1-202ENST00000636088 415 ntBASIC4.3□□□□□ -1.72
HOXD8P13378 AL773545.4-201ENST00000637262 310 ntBASIC4.3□□□□□ -1.72
HOXD8P13378 AL513478.4-201ENST00000641636 310 ntBASIC4.3□□□□□ -1.72
HOXD8P13378 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.3□□□□□ -1.72
HOXD8P13378 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.3□□□□□ -1.72
HOXD8P13378 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
HOXD8P13378 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HOXD8P13378 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HOXD8P13378 FAM35BP-202ENST00000497389 3337 ntBASIC4.29□□□□□ -1.72
HOXD8P13378 Y_RNA.111-201ENST00000363248 100 ntBASIC4.29□□□□□ -1.72
HOXD8P13378 RNU6-884P-201ENST00000363889 107 ntBASIC4.29□□□□□ -1.72
HOXD8P13378 Y_RNA.217-201ENST00000364214 105 ntBASIC4.29□□□□□ -1.72
HOXD8P13378 SNORA7.2-201ENST00000364446 145 ntBASIC4.29□□□□□ -1.72
HOXD8P13378 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.29□□□□□ -1.72
HOXD8P13378 RNU6-211P-201ENST00000384047 107 ntBASIC4.29□□□□□ -1.72
HOXD8P13378 Y_RNA.498-201ENST00000384460 102 ntBASIC4.29□□□□□ -1.72
HOXD8P13378 MIR491-201ENST00000384877 84 ntBASIC4.29□□□□□ -1.72
HOXD8P13378 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
HOXD8P13378 RNU6-1154P-201ENST00000391001 104 ntBASIC4.29□□□□□ -1.72
HOXD8P13378 FTH1P6-201ENST00000430768 320 ntBASIC4.29□□□□□ -1.72
HOXD8P13378 AL645939.1-201ENST00000453429 797 ntBASIC4.29□□□□□ -1.72
HOXD8P13378 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC4.29□□□□□ -1.72
HOXD8P13378 Y_RNA.641-201ENST00000459414 105 ntBASIC4.29□□□□□ -1.72
HOXD8P13378 AC025554.1-201ENST00000505641 188 ntBASIC4.29□□□□□ -1.72
HOXD8P13378 RNU5F-8P-201ENST00000515941 111 ntBASIC4.29□□□□□ -1.72
HOXD8P13378 RNU6-155P-201ENST00000516347 100 ntBASIC4.29□□□□□ -1.72
HOXD8P13378 RNA5SP54-201ENST00000516951 92 ntBASIC4.29□□□□□ -1.72
HOXD8P13378 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.29□□□□□ -1.72
HOXD8P13378 AC015813.4-201ENST00000610469 179 ntBASIC4.29□□□□□ -1.72
HOXD8P13378 AL357075.2-201ENST00000614906 189 ntBASIC4.29□□□□□ -1.72
HOXD8P13378 MESTIT1_1.1-201ENST00000618871 140 ntBASIC4.29□□□□□ -1.72
HOXD8P13378 AC092628.2-201ENST00000622492 339 ntBASIC4.29□□□□□ -1.72
HOXD8P13378 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
HOXD8P13378 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.29□□□□□ -1.72
HOXD8P13378 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HOXD8P13378 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.29□□□□□ -1.72
HOXD8P13378 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.29□□□□□ -1.72
HOXD8P13378 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC4.29□□□□□ -1.72
HOXD8P13378 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.29□□□□□ -1.72
HOXD8P13378 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HOXD8P13378 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.28□□□□□ -1.72
HOXD8P13378 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.28□□□□□ -1.72
HOXD8P13378 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
HOXD8P13378 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HOXD8P13378 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HOXD8P13378 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HOXD8P13378 AC092268.1-201ENST00000342691 405 ntBASIC4.28□□□□□ -1.72
HOXD8P13378 Y_RNA.81-201ENST00000362997 102 ntBASIC4.28□□□□□ -1.72
HOXD8P13378 Y_RNA.179-201ENST00000363844 90 ntBASIC4.28□□□□□ -1.72
HOXD8P13378 Y_RNA.357-201ENST00000365487 109 ntBASIC4.28□□□□□ -1.72
HOXD8P13378 Y_RNA.441-201ENST00000384123 112 ntBASIC4.28□□□□□ -1.72
HOXD8P13378 Y_RNA.488-201ENST00000384403 102 ntBASIC4.28□□□□□ -1.72
HOXD8P13378 Y_RNA.571-201ENST00000384753 98 ntBASIC4.28□□□□□ -1.72
HOXD8P13378 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
HOXD8P13378 FTH1P15-201ENST00000406984 280 ntBASIC4.28□□□□□ -1.72
HOXD8P13378 RN7SKP177-201ENST00000410567 355 ntBASIC4.28□□□□□ -1.72
HOXD8P13378 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms