Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC138627.2-201ENST00000624202 601 ntBASIC-0.84□□□□□ -2.54
TOP2AP11388 AC008993.2-201ENST00000631744 806 ntBASIC-0.84□□□□□ -2.54
TOP2AP11388 AC078974.1-201ENST00000411597 223 ntBASIC-0.84□□□□□ -2.54
TOP2AP11388 AC007435.1-201ENST00000421086 415 ntBASIC-0.84□□□□□ -2.54
TOP2AP11388 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC-0.84□□□□□ -2.54
TOP2AP11388 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC-0.84□□□□□ -2.54
TOP2AP11388 RNF138P1-201ENST00000502765 546 ntBASIC-0.84□□□□□ -2.54
TOP2AP11388 RN7SKP258-201ENST00000517151 304 ntBASIC-0.84□□□□□ -2.54
TOP2AP11388 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC-0.84□□□□□ -2.54
TOP2AP11388 AL355816.2-201ENST00000610049 647 ntBASIC-0.84□□□□□ -2.54
TOP2AP11388 AC068205.3-201ENST00000636385 468 ntBASIC-0.84□□□□□ -2.54
TOP2AP11388 MIR593-201ENST00000384856 100 ntBASIC-0.85□□□□□ -2.55
TOP2AP11388 AF228730.1-201ENST00000397972 663 ntBASIC-0.85□□□□□ -2.55
TOP2AP11388 MIR1290-201ENST00000408735 78 ntBASIC-0.85□□□□□ -2.55
TOP2AP11388 RNU6-1054P-201ENST00000411293 104 ntBASIC-0.85□□□□□ -2.55
TOP2AP11388 AL589872.1-201ENST00000426602 288 ntBASIC-0.85□□□□□ -2.55
TOP2AP11388 MTCO2P25-201ENST00000447065 681 ntBASIC-0.85□□□□□ -2.55
TOP2AP11388 AC048334.1-201ENST00000477975 159 ntBASIC-0.85□□□□□ -2.55
TOP2AP11388 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC-0.85□□□□□ -2.55
TOP2AP11388 DEFB108D-201ENST00000527787 222 ntBASIC-0.85□□□□□ -2.55
TOP2AP11388 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC-0.85□□□□□ -2.55
TOP2AP11388 RPL23AP91-201ENST00000569211 455 ntBASIC-0.85□□□□□ -2.55
TOP2AP11388 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC-0.85□□□□□ -2.55
TOP2AP11388 AC011939.3-201ENST00000613686 466 ntBASIC-0.85□□□□□ -2.55
TOP2AP11388 RNU6-112P-201ENST00000363599 104 ntBASIC-0.86□□□□□ -2.55
TOP2AP11388 RNU6-339P-201ENST00000384310 107 ntBASIC-0.86□□□□□ -2.55
TOP2AP11388 RNA5SP111-201ENST00000411386 101 ntBASIC-0.86□□□□□ -2.55
TOP2AP11388 UBE2V1P10-201ENST00000414685 269 ntBASIC-0.86□□□□□ -2.55
TOP2AP11388 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC-0.86□□□□□ -2.55
TOP2AP11388 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC-0.86□□□□□ -2.55
TOP2AP11388 U7.7-201ENST00000459276 60 ntBASIC-0.86□□□□□ -2.55
TOP2AP11388 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC-0.86□□□□□ -2.55
TOP2AP11388 SMURF2P1-201ENST00000514992 481 ntBASIC-0.86□□□□□ -2.55
TOP2AP11388 MIR8076-201ENST00000611401 83 ntBASIC-0.86□□□□□ -2.55
TOP2AP11388 MTND2P41-201ENST00000637599 773 ntBASIC-0.86□□□□□ -2.55
TOP2AP11388 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC-0.87□□□□□ -2.55
TOP2AP11388 RNU6-1305P-201ENST00000364353 104 ntBASIC-0.87□□□□□ -2.55
TOP2AP11388 VPS26BP1-201ENST00000417155 755 ntBASIC-0.87□□□□□ -2.55
TOP2AP11388 RPL17P35-201ENST00000432217 549 ntBASIC-0.87□□□□□ -2.55
TOP2AP11388 TAAR7P-201ENST00000436141 242 ntBASIC-0.87□□□□□ -2.55
TOP2AP11388 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC-0.87□□□□□ -2.55
TOP2AP11388 BRK1P2-201ENST00000442875 223 ntBASIC-0.87□□□□□ -2.55
TOP2AP11388 RNU6-138P-201ENST00000515952 107 ntBASIC-0.87□□□□□ -2.55
TOP2AP11388 SNORA76.2-201ENST00000517095 137 ntBASIC-0.87□□□□□ -2.55
TOP2AP11388 AC112693.2-201ENST00000556538 232 ntBASIC-0.87□□□□□ -2.55
TOP2AP11388 AC136618.2-201ENST00000575091 400 ntBASIC-0.87□□□□□ -2.55
TOP2AP11388 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC-0.87□□□□□ -2.55
TOP2AP11388 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC-0.87□□□□□ -2.55
TOP2AP11388 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC-0.88□□□□□ -2.55
TOP2AP11388 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC-0.88□□□□□ -2.55
TOP2AP11388 MTND2P19-201ENST00000449129 1012 ntBASIC-0.88□□□□□ -2.55
TOP2AP11388 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC-0.88□□□□□ -2.55
TOP2AP11388 AC025449.1-201ENST00000603896 529 ntBASIC-0.88□□□□□ -2.55
TOP2AP11388 RNU6-163P-201ENST00000384396 106 ntBASIC-0.89□□□□□ -2.55
TOP2AP11388 SNORA80D-201ENST00000384488 135 ntBASIC-0.89□□□□□ -2.55
TOP2AP11388 RNU6-1067P-201ENST00000384752 107 ntBASIC-0.89□□□□□ -2.55
TOP2AP11388 AC060773.1-201ENST00000421698 310 ntBASIC-0.89□□□□□ -2.55
TOP2AP11388 C8orf59P1-201ENST00000429930 303 ntBASIC-0.89□□□□□ -2.55
TOP2AP11388 AC099677.2-201ENST00000436385 175 ntBASIC-0.89□□□□□ -2.55
TOP2AP11388 VPS26AP1-201ENST00000483197 979 ntBASIC-0.89□□□□□ -2.55
TOP2AP11388 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC-0.89□□□□□ -2.55
TOP2AP11388 AL583856.2-201ENST00000606298 543 ntBASIC-0.89□□□□□ -2.55
TOP2AP11388 AL137246.1-201ENST00000607072 977 ntBASIC-0.89□□□□□ -2.55
TOP2AP11388 AL355802.4-201ENST00000607635 548 ntBASIC-0.89□□□□□ -2.55
TOP2AP11388 Y_RNA.363-201ENST00000365529 113 ntBASIC-0.89□□□□□ -2.55
TOP2AP11388 RNU6-735P-201ENST00000410612 107 ntBASIC-0.89□□□□□ -2.55
TOP2AP11388 MTCO2P8-201ENST00000412213 658 ntBASIC-0.89□□□□□ -2.55
TOP2AP11388 PTGES3P1-201ENST00000439531 483 ntBASIC-0.89□□□□□ -2.55
TOP2AP11388 ELOCP30-201ENST00000447108 299 ntBASIC-0.89□□□□□ -2.55
TOP2AP11388 RPS29P15-201ENST00000458329 171 ntBASIC-0.89□□□□□ -2.55
TOP2AP11388 HMGN2P26-201ENST00000463169 339 ntBASIC-0.89□□□□□ -2.55
TOP2AP11388 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC-0.89□□□□□ -2.55
TOP2AP11388 RPS26P48-201ENST00000491713 339 ntBASIC-0.89□□□□□ -2.55
TOP2AP11388 NAF1-205ENST00000509434 385 ntTSL 3 BASIC-0.89□□□□□ -2.55
TOP2AP11388 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC-0.89□□□□□ -2.55
TOP2AP11388 PTP4A1P4-201ENST00000512479 322 ntBASIC-0.89□□□□□ -2.55
TOP2AP11388 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC-0.89□□□□□ -2.55
TOP2AP11388 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC-0.89□□□□□ -2.55
TOP2AP11388 AL132657.2-201ENST00000564417 358 ntBASIC-0.89□□□□□ -2.55
TOP2AP11388 AC119751.3-201ENST00000399720 670 ntBASIC-0.9□□□□□ -2.55
TOP2AP11388 AC097499.1-201ENST00000444277 208 ntBASIC-0.9□□□□□ -2.55
TOP2AP11388 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC-0.9□□□□□ -2.55
TOP2AP11388 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC-0.9□□□□□ -2.55
TOP2AP11388 RNA5SP269-201ENST00000459032 137 ntBASIC-0.9□□□□□ -2.55
TOP2AP11388 BNIP3P23-201ENST00000599655 511 ntBASIC-0.9□□□□□ -2.55
TOP2AP11388 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC-0.9□□□□□ -2.55
TOP2AP11388 SNORA9.1-201ENST00000362412 131 ntBASIC-0.91□□□□□ -2.56
TOP2AP11388 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.91□□□□□ -2.56
TOP2AP11388 RNU6-756P-201ENST00000383997 107 ntBASIC-0.91□□□□□ -2.56
TOP2AP11388 RNY3P5-201ENST00000384127 102 ntBASIC-0.91□□□□□ -2.56
TOP2AP11388 RNU6-821P-201ENST00000390995 107 ntBASIC-0.91□□□□□ -2.56
TOP2AP11388 RNU6-575P-201ENST00000411326 105 ntBASIC-0.91□□□□□ -2.56
TOP2AP11388 RAB28P5-201ENST00000427490 651 ntBASIC-0.91□□□□□ -2.56
TOP2AP11388 MTATP6P16-201ENST00000434543 526 ntBASIC-0.91□□□□□ -2.56
TOP2AP11388 MTATP6P23-201ENST00000440153 476 ntBASIC-0.91□□□□□ -2.56
TOP2AP11388 AC026782.1-201ENST00000512952 449 ntBASIC-0.91□□□□□ -2.56
TOP2AP11388 SNORA25.12-201ENST00000516202 82 ntBASIC-0.91□□□□□ -2.56
TOP2AP11388 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC-0.91□□□□□ -2.56
TOP2AP11388 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC-0.91□□□□□ -2.56
TOP2AP11388 AC011921.3-201ENST00000605540 361 ntBASIC-0.91□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms