Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 AL078601.1-201ENST00000444542 271 ntBASIC3.55□□□□□ -1.84
SNRPA1P09661 snoU109.2-201ENST00000459316 135 ntBASIC3.55□□□□□ -1.84
SNRPA1P09661 HMGN2P13-201ENST00000476476 274 ntBASIC3.55□□□□□ -1.84
SNRPA1P09661 RN7SL429P-201ENST00000479090 223 ntBASIC3.55□□□□□ -1.84
SNRPA1P09661 RN7SL489P-201ENST00000486185 223 ntBASIC3.55□□□□□ -1.84
SNRPA1P09661 RN7SL327P-201ENST00000488659 223 ntBASIC3.55□□□□□ -1.84
SNRPA1P09661 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.55□□□□□ -1.84
SNRPA1P09661 SRP72-202ENST00000504757 745 ntTSL 2 BASIC3.55□□□□□ -1.84
SNRPA1P09661 RNU6-264P-201ENST00000517134 104 ntBASIC3.55□□□□□ -1.84
SNRPA1P09661 IGHV3-76-201ENST00000522465 295 ntBASIC3.55□□□□□ -1.84
SNRPA1P09661 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC3.55□□□□□ -1.84
SNRPA1P09661 AC008121.1-201ENST00000603244 268 ntBASIC3.55□□□□□ -1.84
SNRPA1P09661 AC009314.1-201ENST00000603871 304 ntBASIC3.55□□□□□ -1.84
SNRPA1P09661 AC090115.4-201ENST00000609970 188 ntBASIC3.55□□□□□ -1.84
SNRPA1P09661 AC068831.7-201ENST00000616954 363 ntBASIC3.55□□□□□ -1.84
SNRPA1P09661 RN7SL853P-201ENST00000617250 223 ntBASIC3.55□□□□□ -1.84
SNRPA1P09661 MIR7153-201ENST00000637758 57 ntBASIC3.55□□□□□ -1.84
SNRPA1P09661 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SNRPA1P09661 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.54□□□□□ -1.84
SNRPA1P09661 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SNRPA1P09661 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
SNRPA1P09661 CDC27P3-201ENST00000635418 1910 ntBASIC3.54□□□□□ -1.84
SNRPA1P09661 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SNRPA1P09661 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SNRPA1P09661 RPL9P7-201ENST00000330965 580 ntBASIC3.54□□□□□ -1.84
SNRPA1P09661 FTLP6-201ENST00000355274 422 ntBASIC3.54□□□□□ -1.84
SNRPA1P09661 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.54□□□□□ -1.84
SNRPA1P09661 Y_RNA.428-201ENST00000384078 102 ntBASIC3.54□□□□□ -1.84
SNRPA1P09661 SNORA41-201ENST00000384675 132 ntBASIC3.54□□□□□ -1.84
SNRPA1P09661 RNU6-1105P-201ENST00000384774 107 ntBASIC3.54□□□□□ -1.84
SNRPA1P09661 AL513475.1-201ENST00000406602 315 ntBASIC3.54□□□□□ -1.84
SNRPA1P09661 RNU6-174P-201ENST00000410406 106 ntBASIC3.54□□□□□ -1.84
SNRPA1P09661 Y_RNA.605-201ENST00000410577 105 ntBASIC3.54□□□□□ -1.84
SNRPA1P09661 AC092047.1-201ENST00000424997 240 ntBASIC3.54□□□□□ -1.84
SNRPA1P09661 AL358176.2-201ENST00000425769 204 ntBASIC3.54□□□□□ -1.84
SNRPA1P09661 AC098614.2-201ENST00000426040 255 ntBASIC3.54□□□□□ -1.84
SNRPA1P09661 AL513043.1-201ENST00000439124 535 ntBASIC3.54□□□□□ -1.84
SNRPA1P09661 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.54□□□□□ -1.84
SNRPA1P09661 RNU6-1037P-201ENST00000459571 107 ntBASIC3.54□□□□□ -1.84
SNRPA1P09661 RPL9P9-202ENST00000466501 579 ntBASIC3.54□□□□□ -1.84
SNRPA1P09661 FO393415.2-201ENST00000480085 343 ntBASIC3.54□□□□□ -1.84
SNRPA1P09661 AC068781.1-201ENST00000488231 618 ntBASIC3.54□□□□□ -1.84
SNRPA1P09661 RPL30P5-201ENST00000494923 336 ntBASIC3.54□□□□□ -1.84
SNRPA1P09661 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.54□□□□□ -1.84
SNRPA1P09661 SNORD116.3-201ENST00000517176 78 ntBASIC3.54□□□□□ -1.84
SNRPA1P09661 AC245166.1-201ENST00000521012 253 ntBASIC3.54□□□□□ -1.84
SNRPA1P09661 AC103996.1-201ENST00000555468 102 ntBASIC3.54□□□□□ -1.84
SNRPA1P09661 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.54□□□□□ -1.84
SNRPA1P09661 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.54□□□□□ -1.84
SNRPA1P09661 AL645944.1-201ENST00000603857 493 ntBASIC3.54□□□□□ -1.84
SNRPA1P09661 AL161629.2-201ENST00000615347 275 ntBASIC3.54□□□□□ -1.84
SNRPA1P09661 AC006111.3-201ENST00000622137 383 ntBASIC3.54□□□□□ -1.84
SNRPA1P09661 U6.99-201ENST00000637524 83 ntBASIC3.54□□□□□ -1.84
SNRPA1P09661 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
SNRPA1P09661 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SNRPA1P09661 AL021368.2-201ENST00000606125 5352 ntBASIC3.54□□□□□ -1.84
SNRPA1P09661 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.54□□□□□ -1.84
SNRPA1P09661 RNU4-82P-201ENST00000362443 140 ntBASIC3.53□□□□□ -1.84
SNRPA1P09661 Y_RNA.133-201ENST00000363428 110 ntBASIC3.53□□□□□ -1.84
SNRPA1P09661 RNU6-985P-201ENST00000410182 104 ntBASIC3.53□□□□□ -1.84
SNRPA1P09661 AL117339.3-201ENST00000418733 162 ntBASIC3.53□□□□□ -1.84
SNRPA1P09661 MTCYBP10-201ENST00000424905 650 ntBASIC3.53□□□□□ -1.84
SNRPA1P09661 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.53□□□□□ -1.84
SNRPA1P09661 ARL5AP4-201ENST00000430731 512 ntBASIC3.53□□□□□ -1.84
SNRPA1P09661 AC011816.1-201ENST00000441346 546 ntBASIC3.53□□□□□ -1.84
SNRPA1P09661 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.53□□□□□ -1.84
SNRPA1P09661 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.53□□□□□ -1.84
SNRPA1P09661 ACA59.1-201ENST00000515966 143 ntBASIC3.53□□□□□ -1.84
SNRPA1P09661 Y_RNA.687-201ENST00000516558 91 ntBASIC3.53□□□□□ -1.84
SNRPA1P09661 CBX3P8-201ENST00000532412 525 ntBASIC3.53□□□□□ -1.84
SNRPA1P09661 CPDP1-201ENST00000579660 283 ntBASIC3.53□□□□□ -1.84
SNRPA1P09661 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.53□□□□□ -1.84
SNRPA1P09661 AC092447.9-201ENST00000603395 144 ntBASIC3.53□□□□□ -1.84
SNRPA1P09661 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.53□□□□□ -1.84
SNRPA1P09661 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
SNRPA1P09661 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SNRPA1P09661 GABRG2-229ENST00000641017 3628 ntBASIC3.53□□□□□ -1.84
SNRPA1P09661 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SNRPA1P09661 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SNRPA1P09661 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
SNRPA1P09661 RNU6-574P-201ENST00000384265 107 ntBASIC3.52□□□□□ -1.85
SNRPA1P09661 RPS15AP10-201ENST00000432472 382 ntBASIC3.52□□□□□ -1.85
SNRPA1P09661 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.52□□□□□ -1.85
SNRPA1P09661 MTATP8P1-201ENST00000467115 207 ntBASIC3.52□□□□□ -1.85
SNRPA1P09661 AC022447.4-201ENST00000504053 364 ntBASIC3.52□□□□□ -1.85
SNRPA1P09661 AC105758.1-201ENST00000506038 399 ntBASIC3.52□□□□□ -1.85
SNRPA1P09661 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.52□□□□□ -1.85
SNRPA1P09661 MIR3186-201ENST00000577404 85 ntBASIC3.52□□□□□ -1.85
SNRPA1P09661 MIR4273-201ENST00000582824 84 ntBASIC3.52□□□□□ -1.85
SNRPA1P09661 ZNF861P-201ENST00000588126 639 ntBASIC3.52□□□□□ -1.85
SNRPA1P09661 AL162373.1-201ENST00000620433 407 ntBASIC3.52□□□□□ -1.85
SNRPA1P09661 AL078596.1-201ENST00000624856 447 ntBASIC3.52□□□□□ -1.85
SNRPA1P09661 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.52□□□□□ -1.85
SNRPA1P09661 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
SNRPA1P09661 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SNRPA1P09661 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SNRPA1P09661 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SNRPA1P09661 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SNRPA1P09661 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
SNRPA1P09661 MIR148B-201ENST00000362252 99 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 193.6 ms