Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 SRIP2-201ENST00000428470 166 ntBASIC2.02□□□□□ -2.09
HOXC4P09017 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.02□□□□□ -2.09
HOXC4P09017 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
HOXC4P09017 FABP5P13-201ENST00000452144 328 ntBASIC2.02□□□□□ -2.09
HOXC4P09017 RPL37P6-201ENST00000460682 294 ntBASIC2.02□□□□□ -2.09
HOXC4P09017 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.02□□□□□ -2.09
HOXC4P09017 RPL38P4-201ENST00000502376 214 ntBASIC2.02□□□□□ -2.09
HOXC4P09017 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.02□□□□□ -2.09
HOXC4P09017 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.02□□□□□ -2.09
HOXC4P09017 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.02□□□□□ -2.09
HOXC4P09017 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.02□□□□□ -2.09
HOXC4P09017 SNORA31.3-201ENST00000516029 96 ntBASIC2.02□□□□□ -2.09
HOXC4P09017 SNORD19.2-201ENST00000516978 73 ntBASIC2.02□□□□□ -2.09
HOXC4P09017 RN7SKP258-201ENST00000517151 304 ntBASIC2.02□□□□□ -2.09
HOXC4P09017 AC018638.8-201ENST00000588755 281 ntBASIC2.02□□□□□ -2.09
HOXC4P09017 AL391813.1-201ENST00000603098 260 ntBASIC2.02□□□□□ -2.09
HOXC4P09017 AL670379.6-201ENST00000603753 252 ntBASIC2.02□□□□□ -2.09
HOXC4P09017 AL670379.11-201ENST00000604059 253 ntBASIC2.02□□□□□ -2.09
HOXC4P09017 AL355598.1-201ENST00000604169 202 ntBASIC2.02□□□□□ -2.09
HOXC4P09017 AC008162.1-201ENST00000604718 254 ntBASIC2.02□□□□□ -2.09
HOXC4P09017 AL670379.1-201ENST00000604752 252 ntBASIC2.02□□□□□ -2.09
HOXC4P09017 AL670379.5-201ENST00000605253 252 ntBASIC2.02□□□□□ -2.09
HOXC4P09017 AL670379.12-201ENST00000605291 253 ntBASIC2.02□□□□□ -2.09
HOXC4P09017 AL670379.8-201ENST00000605353 252 ntBASIC2.02□□□□□ -2.09
HOXC4P09017 AL158032.1-201ENST00000605401 106 ntBASIC2.02□□□□□ -2.09
HOXC4P09017 AL670379.7-201ENST00000605823 252 ntBASIC2.02□□□□□ -2.09
HOXC4P09017 AP001486.3-201ENST00000615334 372 ntBASIC2.02□□□□□ -2.09
HOXC4P09017 AC245884.12-201ENST00000615364 59 ntBASIC2.02□□□□□ -2.09
HOXC4P09017 MIR6715A-201ENST00000615929 79 ntBASIC2.02□□□□□ -2.09
HOXC4P09017 AL136221.1-201ENST00000621449 509 ntBASIC2.02□□□□□ -2.09
HOXC4P09017 FRG1KP-201ENST00000623592 341 ntBASIC2.02□□□□□ -2.09
HOXC4P09017 U6.114-201ENST00000636407 96 ntBASIC2.02□□□□□ -2.09
HOXC4P09017 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.02□□□□□ -2.09
HOXC4P09017 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.02□□□□□ -2.09
HOXC4P09017 AL109809.4-201ENST00000603520 2185 ntBASIC2.02□□□□□ -2.09
HOXC4P09017 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
HOXC4P09017 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
HOXC4P09017 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.01□□□□□ -2.09
HOXC4P09017 HSPA8P4-201ENST00000511877 1920 ntBASIC2.01□□□□□ -2.09
HOXC4P09017 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
HOXC4P09017 MTND4P12-201ENST00000498999 1377 ntBASIC2.01□□□□□ -2.09
HOXC4P09017 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
HOXC4P09017 RNU6-1287P-201ENST00000362914 107 ntBASIC2.01□□□□□ -2.09
HOXC4P09017 RNU6-1167P-201ENST00000363227 94 ntBASIC2.01□□□□□ -2.09
HOXC4P09017 RNU6-778P-201ENST00000363269 103 ntBASIC2.01□□□□□ -2.09
HOXC4P09017 RNU4-66P-201ENST00000365199 138 ntBASIC2.01□□□□□ -2.09
HOXC4P09017 RNU4-52P-201ENST00000384209 138 ntBASIC2.01□□□□□ -2.09
HOXC4P09017 RNU6-1060P-201ENST00000384664 107 ntBASIC2.01□□□□□ -2.09
HOXC4P09017 RNU6-220P-201ENST00000390919 107 ntBASIC2.01□□□□□ -2.09
HOXC4P09017 SNORD37.1-201ENST00000390968 65 ntBASIC2.01□□□□□ -2.09
HOXC4P09017 CISD1P1-201ENST00000393907 327 ntBASIC2.01□□□□□ -2.09
HOXC4P09017 AL355497.1-201ENST00000406262 551 ntBASIC2.01□□□□□ -2.09
HOXC4P09017 AL606923.1-201ENST00000406616 190 ntBASIC2.01□□□□□ -2.09
HOXC4P09017 U3.40-201ENST00000408706 208 ntBASIC2.01□□□□□ -2.09
HOXC4P09017 BTF3L4P3-201ENST00000418879 476 ntBASIC2.01□□□□□ -2.09
HOXC4P09017 PDCL2P1-201ENST00000419302 352 ntBASIC2.01□□□□□ -2.09
HOXC4P09017 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC2.01□□□□□ -2.09
HOXC4P09017 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.01□□□□□ -2.09
HOXC4P09017 AC098614.3-201ENST00000438957 440 ntBASIC2.01□□□□□ -2.09
HOXC4P09017 CALM1P1-201ENST00000442082 433 ntBASIC2.01□□□□□ -2.09
HOXC4P09017 HMGN2P26-201ENST00000463169 339 ntBASIC2.01□□□□□ -2.09
HOXC4P09017 RPL21P99-201ENST00000480369 423 ntBASIC2.01□□□□□ -2.09
HOXC4P09017 AC046134.1-201ENST00000514454 666 ntBASIC2.01□□□□□ -2.09
HOXC4P09017 RNA5SP182-201ENST00000516064 82 ntBASIC2.01□□□□□ -2.09
HOXC4P09017 AC107953.1-201ENST00000522216 297 ntBASIC2.01□□□□□ -2.09
HOXC4P09017 RAB11AP2-201ENST00000545905 639 ntBASIC2.01□□□□□ -2.09
HOXC4P09017 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.01□□□□□ -2.09
HOXC4P09017 AC002984.1-201ENST00000591692 448 ntBASIC2.01□□□□□ -2.09
HOXC4P09017 AL670379.4-201ENST00000605279 254 ntBASIC2.01□□□□□ -2.09
HOXC4P09017 AL365204.3-201ENST00000612448 685 ntBASIC2.01□□□□□ -2.09
HOXC4P09017 AC012409.4-201ENST00000612923 249 ntBASIC2.01□□□□□ -2.09
HOXC4P09017 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.01□□□□□ -2.09
HOXC4P09017 AC104985.2-201ENST00000620598 500 ntBASIC2.01□□□□□ -2.09
HOXC4P09017 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.01□□□□□ -2.09
HOXC4P09017 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.01□□□□□ -2.09
HOXC4P09017 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
HOXC4P09017 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.01□□□□□ -2.09
HOXC4P09017 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.01□□□□□ -2.09
HOXC4P09017 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2□□□□□ -2.09
HOXC4P09017 AC103710.2-202ENST00000641454 2853 ntBASIC2□□□□□ -2.09
HOXC4P09017 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
HOXC4P09017 MTND5P30-201ENST00000452896 1731 ntBASIC2□□□□□ -2.09
HOXC4P09017 MTND4P14-201ENST00000435799 1354 ntBASIC2□□□□□ -2.09
HOXC4P09017 CBX3P1-201ENST00000325243 554 ntBASIC2□□□□□ -2.09
HOXC4P09017 Y_RNA.167-201ENST00000363735 109 ntBASIC2□□□□□ -2.09
HOXC4P09017 Y_RNA.231-201ENST00000364358 102 ntBASIC2□□□□□ -2.09
HOXC4P09017 RNU6-522P-201ENST00000364497 107 ntBASIC2□□□□□ -2.09
HOXC4P09017 Y_RNA.378-201ENST00000365652 113 ntBASIC2□□□□□ -2.09
HOXC4P09017 SNORA32.2-201ENST00000384049 122 ntBASIC2□□□□□ -2.09
HOXC4P09017 RNU2-29P-201ENST00000410423 189 ntBASIC2□□□□□ -2.09
HOXC4P09017 RNU6-1140P-201ENST00000410517 106 ntBASIC2□□□□□ -2.09
HOXC4P09017 RNU2-68P-201ENST00000410878 191 ntBASIC2□□□□□ -2.09
HOXC4P09017 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2□□□□□ -2.09
HOXC4P09017 OR6C66P-201ENST00000414917 930 ntBASIC2□□□□□ -2.09
HOXC4P09017 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2□□□□□ -2.09
HOXC4P09017 SKA2P1-201ENST00000425592 390 ntBASIC2□□□□□ -2.09
HOXC4P09017 ERLEC1P1-201ENST00000433806 578 ntBASIC2□□□□□ -2.09
HOXC4P09017 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2□□□□□ -2.09
HOXC4P09017 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC2□□□□□ -2.09
HOXC4P09017 TRAPPC2P3-201ENST00000443200 321 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms