Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 VBP1-203ENST00000535916 944 ntTSL 2 BASIC-0.23□□□□□ -2.45
APOBP04114 AL121579.1-201ENST00000555129 305 ntBASIC-0.23□□□□□ -2.45
APOBP04114 AL161729.4-201ENST00000604650 476 ntBASIC-0.23□□□□□ -2.45
APOBP04114 AC055876.5-201ENST00000605667 259 ntBASIC-0.23□□□□□ -2.45
APOBP04114 RNU6-156P-201ENST00000621869 107 ntBASIC-0.23□□□□□ -2.45
APOBP04114 AL049641.1-201ENST00000441055 1948 ntBASIC-0.24□□□□□ -2.45
APOBP04114 SCARNA18-201ENST00000459004 134 ntBASIC-0.24□□□□□ -2.45
APOBP04114 RNU7-159P-201ENST00000459284 62 ntBASIC-0.24□□□□□ -2.45
APOBP04114 AC015688.6-201ENST00000577737 104 ntBASIC-0.24□□□□□ -2.45
APOBP04114 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC-0.24□□□□□ -2.45
APOBP04114 GTF2IP3-201ENST00000433887 494 ntBASIC-0.24□□□□□ -2.45
APOBP04114 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.24□□□□□ -2.45
APOBP04114 AL133370.2-201ENST00000619934 439 ntBASIC-0.24□□□□□ -2.45
APOBP04114 Y_RNA.490-201ENST00000384413 102 ntBASIC-0.24□□□□□ -2.45
APOBP04114 Y_RNA.498-201ENST00000384460 102 ntBASIC-0.24□□□□□ -2.45
APOBP04114 MIR325-201ENST00000385260 98 ntBASIC-0.24□□□□□ -2.45
APOBP04114 RNU6-952P-201ENST00000391164 108 ntBASIC-0.24□□□□□ -2.45
APOBP04114 RNU6-1054P-201ENST00000411293 104 ntBASIC-0.24□□□□□ -2.45
APOBP04114 AC138623.1-201ENST00000418060 216 ntBASIC-0.24□□□□□ -2.45
APOBP04114 EEF1A1P39-201ENST00000440791 250 ntBASIC-0.24□□□□□ -2.45
APOBP04114 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC-0.24□□□□□ -2.45
APOBP04114 KRTAP13-6P-201ENST00000508999 371 ntBASIC-0.24□□□□□ -2.45
APOBP04114 NAF1-205ENST00000509434 385 ntTSL 3 BASIC-0.24□□□□□ -2.45
APOBP04114 RNU5A-7P-201ENST00000515979 116 ntBASIC-0.24□□□□□ -2.45
APOBP04114 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC-0.24□□□□□ -2.45
APOBP04114 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC-0.24□□□□□ -2.45
APOBP04114 RNU6-339P-201ENST00000384310 107 ntBASIC-0.25□□□□□ -2.45
APOBP04114 RNA5SP56-201ENST00000410277 118 ntBASIC-0.25□□□□□ -2.45
APOBP04114 AC073261.1-201ENST00000429409 121 ntBASIC-0.25□□□□□ -2.45
APOBP04114 U7.7-201ENST00000459276 60 ntBASIC-0.25□□□□□ -2.45
APOBP04114 MRPS17P3-201ENST00000465453 385 ntBASIC-0.25□□□□□ -2.45
APOBP04114 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC-0.25□□□□□ -2.45
APOBP04114 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC-0.25□□□□□ -2.45
APOBP04114 AC087685.1-201ENST00000587507 141 ntBASIC-0.25□□□□□ -2.45
APOBP04114 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC-0.25□□□□□ -2.45
APOBP04114 AF228730.1-201ENST00000397972 663 ntBASIC-0.25□□□□□ -2.45
APOBP04114 AL589994.1-201ENST00000404962 340 ntBASIC-0.25□□□□□ -2.45
APOBP04114 RPL26P27-201ENST00000414397 437 ntBASIC-0.25□□□□□ -2.45
APOBP04114 AC069257.2-201ENST00000441819 155 ntBASIC-0.25□□□□□ -2.45
APOBP04114 AC013267.1-201ENST00000458227 267 ntBASIC-0.25□□□□□ -2.45
APOBP04114 RNA5SP481-201ENST00000516814 122 ntBASIC-0.25□□□□□ -2.45
APOBP04114 AC109329.1-201ENST00000518744 317 ntBASIC-0.25□□□□□ -2.45
APOBP04114 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC-0.25□□□□□ -2.45
APOBP04114 AC092325.1-201ENST00000566449 554 ntBASIC-0.25□□□□□ -2.45
APOBP04114 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC-0.25□□□□□ -2.45
APOBP04114 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC-0.25□□□□□ -2.45
APOBP04114 MTCO1P18-201ENST00000455518 1419 ntBASIC-0.25□□□□□ -2.45
APOBP04114 MIR888-201ENST00000401186 77 ntBASIC-0.25□□□□□ -2.45
APOBP04114 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC-0.25□□□□□ -2.45
APOBP04114 AC004832.4-201ENST00000608952 331 ntBASIC-0.25□□□□□ -2.45
APOBP04114 AC024581.2-201ENST00000619986 252 ntBASIC-0.25□□□□□ -2.45
APOBP04114 HSPA8P13-201ENST00000523715 472 ntBASIC-0.25□□□□□ -2.45
APOBP04114 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC-0.25□□□□□ -2.45
APOBP04114 MIR3165-201ENST00000579874 75 ntBASIC-0.25□□□□□ -2.45
APOBP04114 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC-0.25□□□□□ -2.45
APOBP04114 AP000860.1-201ENST00000605250 559 ntBASIC-0.25□□□□□ -2.45
APOBP04114 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC-0.25□□□□□ -2.45
APOBP04114 AC040896.1-201ENST00000613819 479 ntBASIC-0.25□□□□□ -2.45
APOBP04114 AL078595.3-201ENST00000623815 1166 ntBASIC-0.25□□□□□ -2.45
APOBP04114 AL138713.1-201ENST00000624026 2130 ntBASIC-0.26□□□□□ -2.45
APOBP04114 SNORA42.1-201ENST00000363515 137 ntBASIC-0.26□□□□□ -2.45
APOBP04114 RNU4-84P-201ENST00000364200 139 ntBASIC-0.26□□□□□ -2.45
APOBP04114 RNU6-657P-201ENST00000383904 107 ntBASIC-0.26□□□□□ -2.45
APOBP04114 MIR643-201ENST00000385267 97 ntBASIC-0.26□□□□□ -2.45
APOBP04114 RNU6-910P-201ENST00000390844 107 ntBASIC-0.26□□□□□ -2.45
APOBP04114 EIF4E2P1-201ENST00000393781 255 ntBASIC-0.26□□□□□ -2.45
APOBP04114 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC-0.26□□□□□ -2.45
APOBP04114 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC-0.26□□□□□ -2.45
APOBP04114 BRK1P2-201ENST00000442875 223 ntBASIC-0.26□□□□□ -2.45
APOBP04114 SNORA31.17-201ENST00000516953 127 ntBASIC-0.26□□□□□ -2.45
APOBP04114 AP001328.1-201ENST00000528550 176 ntBASIC-0.26□□□□□ -2.45
APOBP04114 AL357312.1-201ENST00000603879 298 ntBASIC-0.26□□□□□ -2.45
APOBP04114 AC012213.4-201ENST00000606457 354 ntBASIC-0.26□□□□□ -2.45
APOBP04114 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC-0.26□□□□□ -2.45
APOBP04114 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC-0.26□□□□□ -2.45
APOBP04114 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC-0.26□□□□□ -2.45
APOBP04114 AP001324.2-201ENST00000461163 319 ntBASIC-0.26□□□□□ -2.45
APOBP04114 VPS26AP1-201ENST00000483197 979 ntBASIC-0.26□□□□□ -2.45
APOBP04114 AC114981.1-201ENST00000503897 678 ntBASIC-0.26□□□□□ -2.45
APOBP04114 HMGB1P33-201ENST00000563485 527 ntBASIC-0.26□□□□□ -2.45
APOBP04114 AL137246.1-201ENST00000607072 977 ntBASIC-0.26□□□□□ -2.45
APOBP04114 Y_RNA.99-201ENST00000363138 105 ntBASIC-0.26□□□□□ -2.45
APOBP04114 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC-0.26□□□□□ -2.45
APOBP04114 RNU6ATAC33P-201ENST00000408647 126 ntBASIC-0.26□□□□□ -2.45
APOBP04114 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC-0.26□□□□□ -2.45
APOBP04114 RN7SKP258-201ENST00000517151 304 ntBASIC-0.26□□□□□ -2.45
APOBP04114 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC-0.26□□□□□ -2.45
APOBP04114 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.26□□□□□ -2.45
APOBP04114 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC-0.26□□□□□ -2.45
APOBP04114 AL592447.1-201ENST00000447592 540 ntBASIC-0.26□□□□□ -2.45
APOBP04114 BNIP3P27-201ENST00000599991 412 ntBASIC-0.26□□□□□ -2.45
APOBP04114 RMST_4.1-201ENST00000616886 107 ntBASIC-0.26□□□□□ -2.45
APOBP04114 AP000943.4-201ENST00000622912 357 ntBASIC-0.26□□□□□ -2.45
APOBP04114 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC-0.26□□□□□ -2.45
APOBP04114 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC-0.26□□□□□ -2.45
APOBP04114 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC-0.27□□□□□ -2.45
APOBP04114 MIR135A2-201ENST00000384854 100 ntBASIC-0.27□□□□□ -2.45
APOBP04114 RNA5SP109-201ENST00000391010 116 ntBASIC-0.27□□□□□ -2.45
APOBP04114 RNU6-712P-201ENST00000410558 100 ntBASIC-0.27□□□□□ -2.45
APOBP04114 RNU4-63P-201ENST00000411313 118 ntBASIC-0.27□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms