Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AC009032.1-201ENST00000617574 431 ntBASIC0.18□□□□□ -2.38
TNFP01375 AL163051.2-201ENST00000618976 735 ntBASIC0.18□□□□□ -2.38
TNFP01375 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.18□□□□□ -2.38
TNFP01375 AC010615.1-201ENST00000594254 1764 ntBASIC0.17□□□□□ -2.38
TNFP01375 RNU6-492P-201ENST00000363035 104 ntBASIC0.17□□□□□ -2.38
TNFP01375 RNU4-67P-201ENST00000364569 141 ntBASIC0.17□□□□□ -2.38
TNFP01375 RNU6-45P-201ENST00000384471 107 ntBASIC0.17□□□□□ -2.38
TNFP01375 RNU1-119P-201ENST00000391122 165 ntBASIC0.17□□□□□ -2.38
TNFP01375 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.17□□□□□ -2.38
TNFP01375 AL590084.2-201ENST00000401481 382 ntBASIC0.17□□□□□ -2.38
TNFP01375 TXNL1P1-201ENST00000429528 554 ntBASIC0.17□□□□□ -2.38
TNFP01375 AC012308.1-201ENST00000451232 178 ntBASIC0.17□□□□□ -2.38
TNFP01375 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.17□□□□□ -2.38
TNFP01375 RNU1-131P-201ENST00000458943 161 ntBASIC0.17□□□□□ -2.38
TNFP01375 RPS26P45-201ENST00000471748 340 ntBASIC0.17□□□□□ -2.38
TNFP01375 SNORA31.2-201ENST00000516019 134 ntBASIC0.17□□□□□ -2.38
TNFP01375 AC104417.1-201ENST00000523974 751 ntBASIC0.17□□□□□ -2.38
TNFP01375 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC0.17□□□□□ -2.38
TNFP01375 AL390208.1-201ENST00000605885 644 ntBASIC0.17□□□□□ -2.38
TNFP01375 RNU6-858P-201ENST00000362436 107 ntBASIC0.16□□□□□ -2.38
TNFP01375 RNA5SP259-201ENST00000365541 109 ntBASIC0.16□□□□□ -2.38
TNFP01375 MIR625-201ENST00000385047 85 ntBASIC0.16□□□□□ -2.38
TNFP01375 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.16□□□□□ -2.38
TNFP01375 RNU6-754P-201ENST00000391166 107 ntBASIC0.16□□□□□ -2.38
TNFP01375 MTCO2P12-201ENST00000427426 682 ntBASIC0.16□□□□□ -2.38
TNFP01375 AC104651.1-201ENST00000427559 735 ntBASIC0.16□□□□□ -2.38
TNFP01375 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.16□□□□□ -2.38
TNFP01375 BRK1P2-201ENST00000442875 223 ntBASIC0.16□□□□□ -2.38
TNFP01375 GAPDHP17-201ENST00000449858 1001 ntBASIC0.16□□□□□ -2.38
TNFP01375 HESX1-202ENST00000473921 757 ntTSL 5 BASIC0.16□□□□□ -2.38
TNFP01375 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC0.16□□□□□ -2.38
TNFP01375 HMGB1P30-201ENST00000492455 606 ntBASIC0.16□□□□□ -2.38
TNFP01375 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC0.16□□□□□ -2.38
TNFP01375 AC093012.1-202ENST00000549403 582 ntBASIC0.16□□□□□ -2.38
TNFP01375 AC069114.2-201ENST00000604699 304 ntBASIC0.16□□□□□ -2.38
TNFP01375 RAC1P9-201ENST00000604990 392 ntBASIC0.16□□□□□ -2.38
TNFP01375 RNU6-1210P-201ENST00000363775 107 ntBASIC0.15□□□□□ -2.39
TNFP01375 RNU6-188P-201ENST00000364207 107 ntBASIC0.15□□□□□ -2.39
TNFP01375 Y_RNA.234-201ENST00000364409 97 ntBASIC0.15□□□□□ -2.39
TNFP01375 CBX3P9-201ENST00000402326 552 ntBASIC0.15□□□□□ -2.39
TNFP01375 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC0.15□□□□□ -2.39
TNFP01375 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.15□□□□□ -2.39
TNFP01375 MTCO2P5-201ENST00000422621 426 ntBASIC0.15□□□□□ -2.39
TNFP01375 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC0.15□□□□□ -2.39
TNFP01375 SUMO2P18-201ENST00000518873 252 ntBASIC0.15□□□□□ -2.39
TNFP01375 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.15□□□□□ -2.39
TNFP01375 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.15□□□□□ -2.39
TNFP01375 AC023050.2-201ENST00000544968 387 ntBASIC0.15□□□□□ -2.39
TNFP01375 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.15□□□□□ -2.39
TNFP01375 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.15□□□□□ -2.39
TNFP01375 AC105148.1-201ENST00000604961 409 ntBASIC0.15□□□□□ -2.39
TNFP01375 RNU6-87P-201ENST00000607561 108 ntBASIC0.15□□□□□ -2.39
TNFP01375 AL109933.3-201ENST00000619095 188 ntBASIC0.15□□□□□ -2.39
TNFP01375 AL357139.1-201ENST00000407792 426 ntBASIC0.14□□□□□ -2.39
TNFP01375 MTCYBP15-201ENST00000433123 1127 ntBASIC0.14□□□□□ -2.39
TNFP01375 AL008629.1-201ENST00000438615 184 ntBASIC0.14□□□□□ -2.39
TNFP01375 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.14□□□□□ -2.39
TNFP01375 RPL39P6-201ENST00000448289 150 ntBASIC0.14□□□□□ -2.39
TNFP01375 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.14□□□□□ -2.39
TNFP01375 GTF2IP12-201ENST00000456547 356 ntBASIC0.14□□□□□ -2.39
TNFP01375 snoU13.30-201ENST00000458951 104 ntBASIC0.14□□□□□ -2.39
TNFP01375 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.14□□□□□ -2.39
TNFP01375 AL162730.1-201ENST00000605734 292 ntBASIC0.14□□□□□ -2.39
TNFP01375 AC017083.3-201ENST00000609955 700 ntBASIC0.14□□□□□ -2.39
TNFP01375 RNU6-223P-201ENST00000362830 107 ntBASIC0.13□□□□□ -2.39
TNFP01375 RNA5SP264-201ENST00000363115 107 ntBASIC0.13□□□□□ -2.39
TNFP01375 Y_RNA.363-201ENST00000365529 113 ntBASIC0.13□□□□□ -2.39
TNFP01375 RNA5SP63-201ENST00000391225 112 ntBASIC0.13□□□□□ -2.39
TNFP01375 Y_RNA.597-201ENST00000410463 100 ntBASIC0.13□□□□□ -2.39
TNFP01375 RNA5SP111-201ENST00000411386 101 ntBASIC0.13□□□□□ -2.39
TNFP01375 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC0.13□□□□□ -2.39
TNFP01375 AL035398.1-201ENST00000430869 322 ntBASIC0.13□□□□□ -2.39
TNFP01375 MTATP6P30-201ENST00000443540 664 ntBASIC0.13□□□□□ -2.39
TNFP01375 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC0.13□□□□□ -2.39
TNFP01375 snoU13.27-201ENST00000459278 104 ntBASIC0.13□□□□□ -2.39
TNFP01375 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.13□□□□□ -2.39
TNFP01375 AC079140.3-201ENST00000511111 550 ntBASIC0.13□□□□□ -2.39
TNFP01375 SNORD60.2-201ENST00000516883 86 ntBASIC0.13□□□□□ -2.39
TNFP01375 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC0.13□□□□□ -2.39
TNFP01375 AP001981.2-201ENST00000603241 418 ntBASIC0.13□□□□□ -2.39
TNFP01375 DPPA3P3-201ENST00000603842 430 ntBASIC0.13□□□□□ -2.39
TNFP01375 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.13□□□□□ -2.39
TNFP01375 RNU6-349P-201ENST00000362402 107 ntBASIC0.12□□□□□ -2.39
TNFP01375 Y_RNA.85-201ENST00000363014 111 ntBASIC0.12□□□□□ -2.39
TNFP01375 RNU6-969P-201ENST00000383900 105 ntBASIC0.12□□□□□ -2.39
TNFP01375 Y_RNA.476-201ENST00000384347 108 ntBASIC0.12□□□□□ -2.39
TNFP01375 RNU6-1237P-201ENST00000384777 107 ntBASIC0.12□□□□□ -2.39
TNFP01375 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.12□□□□□ -2.39
TNFP01375 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.12□□□□□ -2.39
TNFP01375 MTCO3P45-201ENST00000443036 613 ntBASIC0.12□□□□□ -2.39
TNFP01375 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.12□□□□□ -2.39
TNFP01375 MTND1P9-201ENST00000453775 944 ntBASIC0.12□□□□□ -2.39
TNFP01375 MTCYBP1-201ENST00000454315 1119 ntBASIC0.12□□□□□ -2.39
TNFP01375 RNU6-333P-201ENST00000459117 107 ntBASIC0.12□□□□□ -2.39
TNFP01375 MED28P2-201ENST00000475771 317 ntBASIC0.12□□□□□ -2.39
TNFP01375 TMEM251P1-201ENST00000503717 318 ntBASIC0.12□□□□□ -2.39
TNFP01375 AC093809.1-201ENST00000509155 340 ntBASIC0.12□□□□□ -2.39
TNFP01375 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC0.12□□□□□ -2.39
TNFP01375 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC0.12□□□□□ -2.39
TNFP01375 APOOP3-201ENST00000536787 586 ntBASIC0.12□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms