Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 RNU6-1032P-201ENST00000384100 107 ntBASIC2.45□□□□□ -2.02
GGPS1O95749 AL606923.1-201ENST00000406616 190 ntBASIC2.45□□□□□ -2.02
GGPS1O95749 RN7SKP158-201ENST00000410453 326 ntBASIC2.45□□□□□ -2.02
GGPS1O95749 USP9YP27-201ENST00000418455 438 ntBASIC2.45□□□□□ -2.02
GGPS1O95749 AIMP1P2-201ENST00000425294 312 ntBASIC2.45□□□□□ -2.02
GGPS1O95749 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC2.45□□□□□ -2.02
GGPS1O95749 HMGN2P3-201ENST00000433603 273 ntBASIC2.45□□□□□ -2.02
GGPS1O95749 HMGN2P5-201ENST00000436882 273 ntBASIC2.45□□□□□ -2.02
GGPS1O95749 IFNA11P-201ENST00000446352 526 ntBASIC2.45□□□□□ -2.02
GGPS1O95749 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.45□□□□□ -2.02
GGPS1O95749 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.45□□□□□ -2.02
GGPS1O95749 AC083798.1-201ENST00000472671 131 ntBASIC2.45□□□□□ -2.02
GGPS1O95749 RPL30P12-201ENST00000474666 353 ntBASIC2.45□□□□□ -2.02
GGPS1O95749 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.45□□□□□ -2.02
GGPS1O95749 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.45□□□□□ -2.02
GGPS1O95749 RNU6-377P-201ENST00000515965 102 ntBASIC2.45□□□□□ -2.02
GGPS1O95749 SCARNA16.3-201ENST00000516595 184 ntBASIC2.45□□□□□ -2.02
GGPS1O95749 MTND4P7-201ENST00000523876 130 ntBASIC2.45□□□□□ -2.02
GGPS1O95749 AC104383.1-201ENST00000530297 370 ntBASIC2.45□□□□□ -2.02
GGPS1O95749 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.45□□□□□ -2.02
GGPS1O95749 MIR4424-201ENST00000585257 86 ntBASIC2.45□□□□□ -2.02
GGPS1O95749 APOOP1-201ENST00000604695 592 ntBASIC2.45□□□□□ -2.02
GGPS1O95749 AC097065.2-201ENST00000608159 533 ntBASIC2.45□□□□□ -2.02
GGPS1O95749 Z82243.1-201ENST00000609432 473 ntBASIC2.45□□□□□ -2.02
GGPS1O95749 AL158209.2-201ENST00000619266 216 ntBASIC2.45□□□□□ -2.02
GGPS1O95749 MIR6132-201ENST00000622083 109 ntBASIC2.45□□□□□ -2.02
GGPS1O95749 OR5AK4P-201ENST00000635912 903 ntBASIC2.45□□□□□ -2.02
GGPS1O95749 MIR6863-201ENST00000636112 90 ntBASIC2.45□□□□□ -2.02
GGPS1O95749 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.45□□□□□ -2.02
GGPS1O95749 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
GGPS1O95749 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
GGPS1O95749 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
GGPS1O95749 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
GGPS1O95749 AC005336.3-201ENST00000623833 2679 ntBASIC2.45□□□□□ -2.02
GGPS1O95749 SNORA3A-201ENST00000364113 130 ntBASIC2.44□□□□□ -2.02
GGPS1O95749 RNU6-1322P-201ENST00000364309 107 ntBASIC2.44□□□□□ -2.02
GGPS1O95749 CBX3P9-201ENST00000402326 552 ntBASIC2.44□□□□□ -2.02
GGPS1O95749 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.44□□□□□ -2.02
GGPS1O95749 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.44□□□□□ -2.02
GGPS1O95749 USP9YP8-201ENST00000441913 500 ntBASIC2.44□□□□□ -2.02
GGPS1O95749 AC013470.1-201ENST00000453438 462 ntBASIC2.44□□□□□ -2.02
GGPS1O95749 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2.44□□□□□ -2.02
GGPS1O95749 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.44□□□□□ -2.02
GGPS1O95749 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.44□□□□□ -2.02
GGPS1O95749 RNU6-586P-201ENST00000517265 104 ntBASIC2.44□□□□□ -2.02
GGPS1O95749 AC069113.1-201ENST00000517763 267 ntBASIC2.44□□□□□ -2.02
GGPS1O95749 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.44□□□□□ -2.02
GGPS1O95749 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.44□□□□□ -2.02
GGPS1O95749 COPS8P3-201ENST00000526024 482 ntBASIC2.44□□□□□ -2.02
GGPS1O95749 AP000889.2-201ENST00000532684 490 ntBASIC2.44□□□□□ -2.02
GGPS1O95749 PRELID2P1-201ENST00000552837 301 ntBASIC2.44□□□□□ -2.02
GGPS1O95749 AC090115.3-201ENST00000553218 849 ntBASIC2.44□□□□□ -2.02
GGPS1O95749 AL138976.2-201ENST00000563989 694 ntBASIC2.44□□□□□ -2.02
GGPS1O95749 AC009127.3-201ENST00000570531 403 ntBASIC2.44□□□□□ -2.02
GGPS1O95749 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.44□□□□□ -2.02
GGPS1O95749 AC091135.1-201ENST00000585943 307 ntBASIC2.44□□□□□ -2.02
GGPS1O95749 AC097372.5-201ENST00000623665 376 ntBASIC2.44□□□□□ -2.02
GGPS1O95749 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
GGPS1O95749 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
GGPS1O95749 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
GGPS1O95749 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
GGPS1O95749 Y_RNA.481-201ENST00000384373 102 ntBASIC2.43□□□□□ -2.02
GGPS1O95749 MIR561-201ENST00000385216 97 ntBASIC2.43□□□□□ -2.02
GGPS1O95749 AL591034.2-201ENST00000402839 359 ntBASIC2.43□□□□□ -2.02
GGPS1O95749 VN1R108P-201ENST00000431580 830 ntBASIC2.43□□□□□ -2.02
GGPS1O95749 AC009238.1-201ENST00000442165 424 ntBASIC2.43□□□□□ -2.02
GGPS1O95749 AC009237.6-201ENST00000446969 424 ntBASIC2.43□□□□□ -2.02
GGPS1O95749 RPL39P29-201ENST00000447779 157 ntBASIC2.43□□□□□ -2.02
GGPS1O95749 RNU6-261P-201ENST00000459506 102 ntBASIC2.43□□□□□ -2.02
GGPS1O95749 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.43□□□□□ -2.02
GGPS1O95749 AC107401.1-201ENST00000503426 685 ntBASIC2.43□□□□□ -2.02
GGPS1O95749 CCDC34P1-201ENST00000507441 517 ntBASIC2.43□□□□□ -2.02
GGPS1O95749 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.43□□□□□ -2.02
GGPS1O95749 AP001893.2-201ENST00000526949 202 ntBASIC2.43□□□□□ -2.02
GGPS1O95749 CYCSP26-201ENST00000534107 320 ntBASIC2.43□□□□□ -2.02
GGPS1O95749 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.43□□□□□ -2.02
GGPS1O95749 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.43□□□□□ -2.02
GGPS1O95749 HULC.1-201ENST00000612720 240 ntBASIC2.43□□□□□ -2.02
GGPS1O95749 AC068792.1-201ENST00000621354 417 ntBASIC2.43□□□□□ -2.02
GGPS1O95749 AC124864.2-201ENST00000624736 186 ntBASIC2.43□□□□□ -2.02
GGPS1O95749 MIR219B-201ENST00000637023 88 ntBASIC2.43□□□□□ -2.02
GGPS1O95749 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
GGPS1O95749 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.43□□□□□ -2.02
GGPS1O95749 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
GGPS1O95749 RNU1-23P-201ENST00000363361 144 ntBASIC2.42□□□□□ -2.02
GGPS1O95749 RNU6-336P-201ENST00000364891 107 ntBASIC2.42□□□□□ -2.02
GGPS1O95749 Y_RNA.409-201ENST00000383990 98 ntBASIC2.42□□□□□ -2.02
GGPS1O95749 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
GGPS1O95749 RNU6-1245P-201ENST00000411130 106 ntBASIC2.42□□□□□ -2.02
GGPS1O95749 AL117339.3-201ENST00000418733 162 ntBASIC2.42□□□□□ -2.02
GGPS1O95749 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC2.42□□□□□ -2.02
GGPS1O95749 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
GGPS1O95749 RPL7P54-201ENST00000438336 674 ntBASIC2.42□□□□□ -2.02
GGPS1O95749 AL122001.1-201ENST00000457027 370 ntBASIC2.42□□□□□ -2.02
GGPS1O95749 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.42□□□□□ -2.02
GGPS1O95749 HSPE1P18-201ENST00000517602 280 ntBASIC2.42□□□□□ -2.02
GGPS1O95749 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.42□□□□□ -2.02
GGPS1O95749 AC103591.3-201ENST00000608684 209 ntBASIC2.42□□□□□ -2.02
GGPS1O95749 AL359880.1-201ENST00000621879 266 ntBASIC2.42□□□□□ -2.02
GGPS1O95749 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 169.5 ms