Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 RNU2-3P-201ENST00000410144 191 ntBASIC1.72□□□□□ -2.13
CTDNEP1O95476 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.72□□□□□ -2.13
CTDNEP1O95476 MTATP6P18-201ENST00000417994 673 ntBASIC1.72□□□□□ -2.13
CTDNEP1O95476 AC010975.2-201ENST00000427781 588 ntBASIC1.72□□□□□ -2.13
CTDNEP1O95476 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.72□□□□□ -2.13
CTDNEP1O95476 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC1.72□□□□□ -2.13
CTDNEP1O95476 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.72□□□□□ -2.13
CTDNEP1O95476 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.72□□□□□ -2.13
CTDNEP1O95476 AC003071.1-201ENST00000451219 789 ntBASIC1.72□□□□□ -2.13
CTDNEP1O95476 RNU7-182P-201ENST00000459009 62 ntBASIC1.72□□□□□ -2.13
CTDNEP1O95476 snoU109.2-201ENST00000459316 135 ntBASIC1.72□□□□□ -2.13
CTDNEP1O95476 AP001324.2-201ENST00000461163 319 ntBASIC1.72□□□□□ -2.13
CTDNEP1O95476 AC006512.1-201ENST00000468816 291 ntBASIC1.72□□□□□ -2.13
CTDNEP1O95476 AC011005.2-201ENST00000487324 359 ntBASIC1.72□□□□□ -2.13
CTDNEP1O95476 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.72□□□□□ -2.13
CTDNEP1O95476 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.72□□□□□ -2.13
CTDNEP1O95476 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.72□□□□□ -2.13
CTDNEP1O95476 RNA5SP112-201ENST00000515937 99 ntBASIC1.72□□□□□ -2.13
CTDNEP1O95476 RNA5SP61-201ENST00000516453 100 ntBASIC1.72□□□□□ -2.13
CTDNEP1O95476 ACA59.2-201ENST00000517061 156 ntBASIC1.72□□□□□ -2.13
CTDNEP1O95476 CBX3P7-201ENST00000532876 502 ntBASIC1.72□□□□□ -2.13
CTDNEP1O95476 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
CTDNEP1O95476 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.72□□□□□ -2.13
CTDNEP1O95476 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.72□□□□□ -2.13
CTDNEP1O95476 MIR4703-201ENST00000577728 79 ntBASIC1.72□□□□□ -2.13
CTDNEP1O95476 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.72□□□□□ -2.13
CTDNEP1O95476 MIR4303-201ENST00000581299 66 ntBASIC1.72□□□□□ -2.13
CTDNEP1O95476 AC068790.2-201ENST00000602601 557 ntBASIC1.72□□□□□ -2.13
CTDNEP1O95476 AC073648.5-201ENST00000603502 305 ntBASIC1.72□□□□□ -2.13
CTDNEP1O95476 AC097065.2-201ENST00000608159 533 ntBASIC1.72□□□□□ -2.13
CTDNEP1O95476 MIR6715A-201ENST00000615929 79 ntBASIC1.72□□□□□ -2.13
CTDNEP1O95476 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.72□□□□□ -2.13
CTDNEP1O95476 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.71□□□□□ -2.14
CTDNEP1O95476 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.71□□□□□ -2.14
CTDNEP1O95476 MIR412-201ENST00000362142 91 ntBASIC1.71□□□□□ -2.14
CTDNEP1O95476 RNU4-24P-201ENST00000364565 139 ntBASIC1.71□□□□□ -2.14
CTDNEP1O95476 RNU6-1303P-201ENST00000364841 107 ntBASIC1.71□□□□□ -2.14
CTDNEP1O95476 RNU6-1280P-201ENST00000365211 107 ntBASIC1.71□□□□□ -2.14
CTDNEP1O95476 MIR10A-201ENST00000385043 110 ntBASIC1.71□□□□□ -2.14
CTDNEP1O95476 AL133475.1-201ENST00000404414 305 ntBASIC1.71□□□□□ -2.14
CTDNEP1O95476 RNU6-387P-201ENST00000411331 105 ntBASIC1.71□□□□□ -2.14
CTDNEP1O95476 CYCSP33-201ENST00000414485 327 ntBASIC1.71□□□□□ -2.14
CTDNEP1O95476 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC1.71□□□□□ -2.14
CTDNEP1O95476 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.71□□□□□ -2.14
CTDNEP1O95476 PTGES3P4-201ENST00000426243 356 ntBASIC1.71□□□□□ -2.14
CTDNEP1O95476 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.71□□□□□ -2.14
CTDNEP1O95476 AL596276.1-201ENST00000434465 418 ntBASIC1.71□□□□□ -2.14
CTDNEP1O95476 DNAJC19P4-201ENST00000440115 345 ntBASIC1.71□□□□□ -2.14
CTDNEP1O95476 NDUFB1P2-201ENST00000449477 176 ntBASIC1.71□□□□□ -2.14
CTDNEP1O95476 BTF3P15-201ENST00000455606 336 ntBASIC1.71□□□□□ -2.14
CTDNEP1O95476 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.71□□□□□ -2.14
CTDNEP1O95476 AC107032.1-201ENST00000485945 480 ntBASIC1.71□□□□□ -2.14
CTDNEP1O95476 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.71□□□□□ -2.14
CTDNEP1O95476 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.71□□□□□ -2.14
CTDNEP1O95476 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
CTDNEP1O95476 AC024909.2-201ENST00000553035 286 ntBASIC1.71□□□□□ -2.14
CTDNEP1O95476 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.71□□□□□ -2.14
CTDNEP1O95476 AGGF1P4-201ENST00000568249 801 ntBASIC1.71□□□□□ -2.14
CTDNEP1O95476 MTATP6P3-201ENST00000581686 676 ntBASIC1.71□□□□□ -2.14
CTDNEP1O95476 AC103987.3-201ENST00000582071 292 ntBASIC1.71□□□□□ -2.14
CTDNEP1O95476 AC104984.5-201ENST00000586878 94 ntBASIC1.71□□□□□ -2.14
CTDNEP1O95476 AC091805.2-201ENST00000603848 235 ntBASIC1.71□□□□□ -2.14
CTDNEP1O95476 AL138889.2-201ENST00000603883 242 ntBASIC1.71□□□□□ -2.14
CTDNEP1O95476 AC005034.5-201ENST00000604219 466 ntBASIC1.71□□□□□ -2.14
CTDNEP1O95476 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.71□□□□□ -2.14
CTDNEP1O95476 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.71□□□□□ -2.14
CTDNEP1O95476 AC004908.3-201ENST00000610248 625 ntBASIC1.71□□□□□ -2.14
CTDNEP1O95476 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.71□□□□□ -2.14
CTDNEP1O95476 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.71□□□□□ -2.14
CTDNEP1O95476 SEPT14P19-203ENST00000633205 211 ntBASIC1.71□□□□□ -2.14
CTDNEP1O95476 MTND5P26-201ENST00000426018 1752 ntBASIC1.71□□□□□ -2.14
CTDNEP1O95476 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
CTDNEP1O95476 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
CTDNEP1O95476 OR4G2P-201ENST00000328113 903 ntBASIC1.7□□□□□ -2.14
CTDNEP1O95476 Y_RNA.41-201ENST00000362646 102 ntBASIC1.7□□□□□ -2.14
CTDNEP1O95476 RNU6-1287P-201ENST00000362914 107 ntBASIC1.7□□□□□ -2.14
CTDNEP1O95476 RNU6-1120P-201ENST00000362988 108 ntBASIC1.7□□□□□ -2.14
CTDNEP1O95476 RNU1-17P-201ENST00000363022 152 ntBASIC1.7□□□□□ -2.14
CTDNEP1O95476 Y_RNA.194-201ENST00000363985 102 ntBASIC1.7□□□□□ -2.14
CTDNEP1O95476 RNU1-42P-201ENST00000364033 160 ntBASIC1.7□□□□□ -2.14
CTDNEP1O95476 RNU6-715P-201ENST00000365204 103 ntBASIC1.7□□□□□ -2.14
CTDNEP1O95476 Y_RNA.436-201ENST00000384097 102 ntBASIC1.7□□□□□ -2.14
CTDNEP1O95476 RNU6-72P-201ENST00000384285 79 ntBASIC1.7□□□□□ -2.14
CTDNEP1O95476 RNU6-1060P-201ENST00000384664 107 ntBASIC1.7□□□□□ -2.14
CTDNEP1O95476 RNU6-19P-201ENST00000384718 107 ntBASIC1.7□□□□□ -2.14
CTDNEP1O95476 RNU6-606P-201ENST00000384721 111 ntBASIC1.7□□□□□ -2.14
CTDNEP1O95476 MIR517C-201ENST00000385103 95 ntBASIC1.7□□□□□ -2.14
CTDNEP1O95476 RNU6-1158P-201ENST00000391167 107 ntBASIC1.7□□□□□ -2.14
CTDNEP1O95476 AL663109.1-201ENST00000411498 844 ntBASIC1.7□□□□□ -2.14
CTDNEP1O95476 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.7□□□□□ -2.14
CTDNEP1O95476 AL353621.1-201ENST00000418219 243 ntBASIC1.7□□□□□ -2.14
CTDNEP1O95476 PGBD4P6-201ENST00000421501 610 ntBASIC1.7□□□□□ -2.14
CTDNEP1O95476 AL354695.1-201ENST00000427935 228 ntBASIC1.7□□□□□ -2.14
CTDNEP1O95476 AL589823.1-201ENST00000429577 183 ntBASIC1.7□□□□□ -2.14
CTDNEP1O95476 AL627311.1-201ENST00000431514 115 ntBASIC1.7□□□□□ -2.14
CTDNEP1O95476 AL591806.2-201ENST00000433122 173 ntBASIC1.7□□□□□ -2.14
CTDNEP1O95476 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.7□□□□□ -2.14
CTDNEP1O95476 IFNA20P-201ENST00000436840 528 ntBASIC1.7□□□□□ -2.14
CTDNEP1O95476 CALM1P1-201ENST00000442082 433 ntBASIC1.7□□□□□ -2.14
CTDNEP1O95476 RPS29P29-201ENST00000456396 171 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms