Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 RNU6-546P-201ENST00000383991 107 ntBASIC1.51□□□□□ -2.17
SEMA3DO95025 RNU6-74P-201ENST00000384235 107 ntBASIC1.51□□□□□ -2.17
SEMA3DO95025 MT-TH-201ENST00000387441 69 ntBASIC1.51□□□□□ -2.17
SEMA3DO95025 RAP1BP3-201ENST00000407180 549 ntBASIC1.51□□□□□ -2.17
SEMA3DO95025 MIR1262-201ENST00000408276 93 ntBASIC1.51□□□□□ -2.17
SEMA3DO95025 RNU6-607P-201ENST00000411283 108 ntBASIC1.51□□□□□ -2.17
SEMA3DO95025 RNU6-387P-201ENST00000411331 105 ntBASIC1.51□□□□□ -2.17
SEMA3DO95025 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
SEMA3DO95025 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC1.51□□□□□ -2.17
SEMA3DO95025 AL445567.1-201ENST00000439121 144 ntBASIC1.51□□□□□ -2.17
SEMA3DO95025 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.51□□□□□ -2.17
SEMA3DO95025 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.51□□□□□ -2.17
SEMA3DO95025 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC1.51□□□□□ -2.17
SEMA3DO95025 AC006026.2-201ENST00000457376 180 ntBASIC1.51□□□□□ -2.17
SEMA3DO95025 snoU13.14-201ENST00000459372 104 ntBASIC1.51□□□□□ -2.17
SEMA3DO95025 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.51□□□□□ -2.17
SEMA3DO95025 MTCYBP40-201ENST00000509390 1135 ntBASIC1.51□□□□□ -2.17
SEMA3DO95025 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.51□□□□□ -2.17
SEMA3DO95025 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.51□□□□□ -2.17
SEMA3DO95025 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.51□□□□□ -2.17
SEMA3DO95025 AC137800.2-201ENST00000574375 120 ntBASIC1.51□□□□□ -2.17
SEMA3DO95025 AC025811.1-201ENST00000604312 472 ntBASIC1.51□□□□□ -2.17
SEMA3DO95025 MIR98-201ENST00000606724 119 ntBASIC1.51□□□□□ -2.17
SEMA3DO95025 uc_338.5-201ENST00000611839 155 ntBASIC1.51□□□□□ -2.17
SEMA3DO95025 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.51□□□□□ -2.17
SEMA3DO95025 AC063943.3-201ENST00000615562 356 ntBASIC1.51□□□□□ -2.17
SEMA3DO95025 AL132822.1-201ENST00000617063 513 ntBASIC1.51□□□□□ -2.17
SEMA3DO95025 AC023510.2-201ENST00000622162 746 ntBASIC1.51□□□□□ -2.17
SEMA3DO95025 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.51□□□□□ -2.17
SEMA3DO95025 U6.114-201ENST00000636407 96 ntBASIC1.51□□□□□ -2.17
SEMA3DO95025 FARSBP1-201ENST00000435808 1778 ntBASIC1.51□□□□□ -2.17
SEMA3DO95025 ANKRD20A17P-201ENST00000511745 1330 ntBASIC1.5□□□□□ -2.17
SEMA3DO95025 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
SEMA3DO95025 RNU6-1287P-201ENST00000362914 107 ntBASIC1.5□□□□□ -2.17
SEMA3DO95025 RNU6-743P-201ENST00000364151 106 ntBASIC1.5□□□□□ -2.17
SEMA3DO95025 RNU6-45P-201ENST00000384471 107 ntBASIC1.5□□□□□ -2.17
SEMA3DO95025 RNU6-1060P-201ENST00000384664 107 ntBASIC1.5□□□□□ -2.17
SEMA3DO95025 MIR1-2-201ENST00000384961 85 ntBASIC1.5□□□□□ -2.17
SEMA3DO95025 RNU6-550P-201ENST00000391057 101 ntBASIC1.5□□□□□ -2.17
SEMA3DO95025 MIR1289-2-201ENST00000408360 111 ntBASIC1.5□□□□□ -2.17
SEMA3DO95025 RNU6-955P-201ENST00000410497 104 ntBASIC1.5□□□□□ -2.17
SEMA3DO95025 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.5□□□□□ -2.17
SEMA3DO95025 BTF3L4P1-201ENST00000413813 468 ntBASIC1.5□□□□□ -2.17
SEMA3DO95025 AC007969.2-201ENST00000441891 191 ntBASIC1.5□□□□□ -2.17
SEMA3DO95025 RPL39P29-201ENST00000447779 157 ntBASIC1.5□□□□□ -2.17
SEMA3DO95025 AL033528.1-201ENST00000453780 140 ntBASIC1.5□□□□□ -2.17
SEMA3DO95025 SNRPFP4-201ENST00000456366 242 ntBASIC1.5□□□□□ -2.17
SEMA3DO95025 AL122001.1-201ENST00000457027 370 ntBASIC1.5□□□□□ -2.17
SEMA3DO95025 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC1.5□□□□□ -2.17
SEMA3DO95025 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.5□□□□□ -2.17
SEMA3DO95025 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.5□□□□□ -2.17
SEMA3DO95025 FAM206BP-201ENST00000510179 541 ntBASIC1.5□□□□□ -2.17
SEMA3DO95025 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.5□□□□□ -2.17
SEMA3DO95025 RNU6-410P-201ENST00000517006 107 ntBASIC1.5□□□□□ -2.17
SEMA3DO95025 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.5□□□□□ -2.17
SEMA3DO95025 DUXAP5-201ENST00000529668 529 ntBASIC1.5□□□□□ -2.17
SEMA3DO95025 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.5□□□□□ -2.17
SEMA3DO95025 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.5□□□□□ -2.17
SEMA3DO95025 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.5□□□□□ -2.17
SEMA3DO95025 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.5□□□□□ -2.17
SEMA3DO95025 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.5□□□□□ -2.17
SEMA3DO95025 MIR3682-201ENST00000581338 84 ntBASIC1.5□□□□□ -2.17
SEMA3DO95025 MIR3124-201ENST00000582636 67 ntBASIC1.5□□□□□ -2.17
SEMA3DO95025 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.5□□□□□ -2.17
SEMA3DO95025 Z84480.1-201ENST00000605131 311 ntBASIC1.5□□□□□ -2.17
SEMA3DO95025 BX248123.2-201ENST00000606318 124 ntBASIC1.5□□□□□ -2.17
SEMA3DO95025 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.5□□□□□ -2.17
SEMA3DO95025 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.5□□□□□ -2.17
SEMA3DO95025 AL359314.1-201ENST00000616913 261 ntBASIC1.5□□□□□ -2.17
SEMA3DO95025 AL159153.1-201ENST00000619688 317 ntBASIC1.5□□□□□ -2.17
SEMA3DO95025 AC091304.6-201ENST00000619761 202 ntBASIC1.5□□□□□ -2.17
SEMA3DO95025 AC007792.1-201ENST00000623023 402 ntBASIC1.5□□□□□ -2.17
SEMA3DO95025 AL359757.2-201ENST00000624309 274 ntBASIC1.5□□□□□ -2.17
SEMA3DO95025 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
SEMA3DO95025 MTND5P17-201ENST00000418405 1603 ntBASIC1.5□□□□□ -2.17
SEMA3DO95025 AC006026.1-201ENST00000444025 1803 ntBASIC1.5□□□□□ -2.17
SEMA3DO95025 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
SEMA3DO95025 MTND4P23-201ENST00000447723 1363 ntBASIC1.49□□□□□ -2.17
SEMA3DO95025 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
SEMA3DO95025 RNU6-1303P-201ENST00000364841 107 ntBASIC1.49□□□□□ -2.17
SEMA3DO95025 RNU5E-7P-201ENST00000365290 117 ntBASIC1.49□□□□□ -2.17
SEMA3DO95025 SNORA26.8-201ENST00000391306 124 ntBASIC1.49□□□□□ -2.17
SEMA3DO95025 MTND3P17-201ENST00000416968 344 ntBASIC1.49□□□□□ -2.17
SEMA3DO95025 BX295541.1-201ENST00000417774 250 ntBASIC1.49□□□□□ -2.17
SEMA3DO95025 MTND2P18-201ENST00000419962 1030 ntBASIC1.49□□□□□ -2.17
SEMA3DO95025 EIF4EP2-201ENST00000422816 654 ntBASIC1.49□□□□□ -2.17
SEMA3DO95025 GPR143P-201ENST00000434155 205 ntBASIC1.49□□□□□ -2.17
SEMA3DO95025 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.49□□□□□ -2.17
SEMA3DO95025 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.49□□□□□ -2.17
SEMA3DO95025 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.49□□□□□ -2.17
SEMA3DO95025 PRELID3BP1-201ENST00000457142 540 ntBASIC1.49□□□□□ -2.17
SEMA3DO95025 AMD1P1-201ENST00000457220 922 ntBASIC1.49□□□□□ -2.17
SEMA3DO95025 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.49□□□□□ -2.17
SEMA3DO95025 AC074344.1-201ENST00000512823 224 ntBASIC1.49□□□□□ -2.17
SEMA3DO95025 RNU6-1178P-201ENST00000516674 107 ntBASIC1.49□□□□□ -2.17
SEMA3DO95025 LRRC34P1-201ENST00000542742 915 ntBASIC1.49□□□□□ -2.17
SEMA3DO95025 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.49□□□□□ -2.17
SEMA3DO95025 AC022254.1-201ENST00000567857 235 ntBASIC1.49□□□□□ -2.17
SEMA3DO95025 AC012414.6-201ENST00000568241 401 ntBASIC1.49□□□□□ -2.17
SEMA3DO95025 MIR4775-201ENST00000581168 75 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 130.2 ms