Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 AL137843.1-201ENST00000605078 385 ntBASIC3.35□□□□□ -1.87
PCDHGA12O60330 AL353621.2-201ENST00000605340 133 ntBASIC3.35□□□□□ -1.87
PCDHGA12O60330 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
PCDHGA12O60330 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PCDHGA12O60330 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
PCDHGA12O60330 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.34□□□□□ -1.87
PCDHGA12O60330 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
PCDHGA12O60330 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
PCDHGA12O60330 PWAR6-201ENST00000552334 4618 ntBASIC3.34□□□□□ -1.87
PCDHGA12O60330 SNORD50.1-201ENST00000362987 71 ntBASIC3.34□□□□□ -1.87
PCDHGA12O60330 RNY1P16-201ENST00000363063 111 ntBASIC3.34□□□□□ -1.87
PCDHGA12O60330 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
PCDHGA12O60330 RNU6-700P-201ENST00000391043 107 ntBASIC3.34□□□□□ -1.87
PCDHGA12O60330 AL590004.1-201ENST00000405321 300 ntBASIC3.34□□□□□ -1.87
PCDHGA12O60330 FO393415.2-201ENST00000480085 343 ntBASIC3.34□□□□□ -1.87
PCDHGA12O60330 RPL36AP48-201ENST00000485521 314 ntBASIC3.34□□□□□ -1.87
PCDHGA12O60330 AC090096.1-201ENST00000489168 390 ntBASIC3.34□□□□□ -1.87
PCDHGA12O60330 AC022447.4-201ENST00000504053 364 ntBASIC3.34□□□□□ -1.87
PCDHGA12O60330 RAC1P5-201ENST00000512182 576 ntBASIC3.34□□□□□ -1.87
PCDHGA12O60330 AC009812.2-201ENST00000517657 457 ntBASIC3.34□□□□□ -1.87
PCDHGA12O60330 HSPE1P4-201ENST00000550617 308 ntBASIC3.34□□□□□ -1.87
PCDHGA12O60330 HMGB1P24-202ENST00000615653 685 ntBASIC3.34□□□□□ -1.87
PCDHGA12O60330 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
PCDHGA12O60330 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.34□□□□□ -1.88
PCDHGA12O60330 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
PCDHGA12O60330 AL359854.1-201ENST00000614203 1594 ntBASIC3.34□□□□□ -1.88
PCDHGA12O60330 AC233981.2-201ENST00000611524 1614 ntBASIC3.33□□□□□ -1.88
PCDHGA12O60330 AC093908.1-201ENST00000623125 8092 ntBASIC3.33□□□□□ -1.88
PCDHGA12O60330 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.33□□□□□ -1.88
PCDHGA12O60330 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
PCDHGA12O60330 MIR369-201ENST00000362155 70 ntBASIC3.33□□□□□ -1.88
PCDHGA12O60330 Y_RNA.202-201ENST00000364083 110 ntBASIC3.33□□□□□ -1.88
PCDHGA12O60330 Y_RNA.252-201ENST00000364556 101 ntBASIC3.33□□□□□ -1.88
PCDHGA12O60330 RNU4-56P-201ENST00000364700 142 ntBASIC3.33□□□□□ -1.88
PCDHGA12O60330 RNU6-968P-201ENST00000384076 107 ntBASIC3.33□□□□□ -1.88
PCDHGA12O60330 Y_RNA.428-201ENST00000384078 102 ntBASIC3.33□□□□□ -1.88
PCDHGA12O60330 Y_RNA.500-201ENST00000384466 111 ntBASIC3.33□□□□□ -1.88
PCDHGA12O60330 Y_RNA.577-201ENST00000384794 101 ntBASIC3.33□□□□□ -1.88
PCDHGA12O60330 SAR1AP2-201ENST00000392696 594 ntBASIC3.33□□□□□ -1.88
PCDHGA12O60330 AC017079.2-201ENST00000416102 485 ntBASIC3.33□□□□□ -1.88
PCDHGA12O60330 MTCYBP10-201ENST00000424905 650 ntBASIC3.33□□□□□ -1.88
PCDHGA12O60330 AC244670.1-201ENST00000436879 112 ntBASIC3.33□□□□□ -1.88
PCDHGA12O60330 MTCYBP6-201ENST00000441810 138 ntBASIC3.33□□□□□ -1.88
PCDHGA12O60330 AC006539.3-201ENST00000454258 129 ntBASIC3.33□□□□□ -1.88
PCDHGA12O60330 RPS29P12-201ENST00000460178 152 ntBASIC3.33□□□□□ -1.88
PCDHGA12O60330 AP001324.2-201ENST00000461163 319 ntBASIC3.33□□□□□ -1.88
PCDHGA12O60330 RPL31P41-201ENST00000477967 372 ntBASIC3.33□□□□□ -1.88
PCDHGA12O60330 RPL30P10-201ENST00000488148 337 ntBASIC3.33□□□□□ -1.88
PCDHGA12O60330 RNU6-567P-201ENST00000516746 107 ntBASIC3.33□□□□□ -1.88
PCDHGA12O60330 IGHV3-76-201ENST00000522465 295 ntBASIC3.33□□□□□ -1.88
PCDHGA12O60330 CBX3P8-201ENST00000532412 525 ntBASIC3.33□□□□□ -1.88
PCDHGA12O60330 EIF4BP1-201ENST00000554881 351 ntBASIC3.33□□□□□ -1.88
PCDHGA12O60330 AC021231.3-201ENST00000558497 370 ntBASIC3.33□□□□□ -1.88
PCDHGA12O60330 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.33□□□□□ -1.88
PCDHGA12O60330 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.33□□□□□ -1.88
PCDHGA12O60330 MIR3136-201ENST00000583498 78 ntBASIC3.33□□□□□ -1.88
PCDHGA12O60330 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PCDHGA12O60330 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
PCDHGA12O60330 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
PCDHGA12O60330 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.33□□□□□ -1.88
PCDHGA12O60330 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PCDHGA12O60330 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.32□□□□□ -1.88
PCDHGA12O60330 AC068647.1-201ENST00000489539 2265 ntBASIC3.32□□□□□ -1.88
PCDHGA12O60330 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
PCDHGA12O60330 RNU4-9P-201ENST00000364951 139 ntBASIC3.32□□□□□ -1.88
PCDHGA12O60330 AC117470.1-201ENST00000381974 330 ntBASIC3.32□□□□□ -1.88
PCDHGA12O60330 RNU6-1286P-201ENST00000383871 107 ntBASIC3.32□□□□□ -1.88
PCDHGA12O60330 Y_RNA.422-201ENST00000384054 114 ntBASIC3.32□□□□□ -1.88
PCDHGA12O60330 Y_RNA.510-201ENST00000384511 114 ntBASIC3.32□□□□□ -1.88
PCDHGA12O60330 AL357075.1-201ENST00000404107 726 ntBASIC3.32□□□□□ -1.88
PCDHGA12O60330 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.32□□□□□ -1.88
PCDHGA12O60330 AC243428.1-201ENST00000421099 264 ntBASIC3.32□□□□□ -1.88
PCDHGA12O60330 BX679664.1-201ENST00000434429 253 ntBASIC3.32□□□□□ -1.88
PCDHGA12O60330 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.32□□□□□ -1.88
PCDHGA12O60330 AC079354.2-201ENST00000453523 154 ntBASIC3.32□□□□□ -1.88
PCDHGA12O60330 RPL30P12-201ENST00000474666 353 ntBASIC3.32□□□□□ -1.88
PCDHGA12O60330 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.32□□□□□ -1.88
PCDHGA12O60330 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.32□□□□□ -1.88
PCDHGA12O60330 RNA5SP112-201ENST00000515937 99 ntBASIC3.32□□□□□ -1.88
PCDHGA12O60330 SNORD116.3-201ENST00000517176 78 ntBASIC3.32□□□□□ -1.88
PCDHGA12O60330 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.32□□□□□ -1.88
PCDHGA12O60330 AL590705.4-201ENST00000532209 134 ntBASIC3.32□□□□□ -1.88
PCDHGA12O60330 AC079598.5-201ENST00000547460 117 ntBASIC3.32□□□□□ -1.88
PCDHGA12O60330 LARP7P3-201ENST00000579888 337 ntBASIC3.32□□□□□ -1.88
PCDHGA12O60330 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.32□□□□□ -1.88
PCDHGA12O60330 AC022149.2-201ENST00000621061 203 ntBASIC3.32□□□□□ -1.88
PCDHGA12O60330 MIR6852-201ENST00000621699 66 ntBASIC3.32□□□□□ -1.88
PCDHGA12O60330 uc_338.22-201ENST00000622722 187 ntBASIC3.32□□□□□ -1.88
PCDHGA12O60330 MIR7153-201ENST00000637758 57 ntBASIC3.32□□□□□ -1.88
PCDHGA12O60330 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.32□□□□□ -1.88
PCDHGA12O60330 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
PCDHGA12O60330 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
PCDHGA12O60330 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.32□□□□□ -1.88
PCDHGA12O60330 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PCDHGA12O60330 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.31□□□□□ -1.88
PCDHGA12O60330 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.31□□□□□ -1.88
PCDHGA12O60330 RNU6-1115P-201ENST00000362490 106 ntBASIC3.31□□□□□ -1.88
PCDHGA12O60330 RNU6-1285P-201ENST00000363480 105 ntBASIC3.31□□□□□ -1.88
PCDHGA12O60330 Y_RNA.463-201ENST00000384271 102 ntBASIC3.31□□□□□ -1.88
PCDHGA12O60330 Y_RNA.533-201ENST00000384596 114 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms