Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 Y_RNA.510-201ENST00000384511 114 ntBASIC2.81□□□□□ -1.96
LDB2O43679 AL590004.2-201ENST00000404787 371 ntBASIC2.81□□□□□ -1.96
LDB2O43679 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.81□□□□□ -1.96
LDB2O43679 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.81□□□□□ -1.96
LDB2O43679 AL133396.1-201ENST00000432048 687 ntBASIC2.81□□□□□ -1.96
LDB2O43679 AL513043.1-201ENST00000439124 535 ntBASIC2.81□□□□□ -1.96
LDB2O43679 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.81□□□□□ -1.96
LDB2O43679 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.81□□□□□ -1.96
LDB2O43679 UBE2DNL-203ENST00000474922 222 ntBASIC2.81□□□□□ -1.96
LDB2O43679 RPL7P42-201ENST00000481005 679 ntBASIC2.81□□□□□ -1.96
LDB2O43679 AK3P2-201ENST00000507976 429 ntBASIC2.81□□□□□ -1.96
LDB2O43679 PTP4A1P4-201ENST00000512479 322 ntBASIC2.81□□□□□ -1.96
LDB2O43679 AC091826.1-201ENST00000514065 313 ntBASIC2.81□□□□□ -1.96
LDB2O43679 RNU6-377P-201ENST00000515965 102 ntBASIC2.81□□□□□ -1.96
LDB2O43679 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.81□□□□□ -1.96
LDB2O43679 AC103996.1-201ENST00000555468 102 ntBASIC2.81□□□□□ -1.96
LDB2O43679 CPDP1-201ENST00000579660 283 ntBASIC2.81□□□□□ -1.96
LDB2O43679 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.81□□□□□ -1.96
LDB2O43679 AC004852.3-201ENST00000614131 326 ntBASIC2.81□□□□□ -1.96
LDB2O43679 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
LDB2O43679 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
LDB2O43679 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
LDB2O43679 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.8□□□□□ -1.96
LDB2O43679 AL161431.1-201ENST00000618966 4205 ntBASIC2.8□□□□□ -1.96
LDB2O43679 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.8□□□□□ -1.96
LDB2O43679 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
LDB2O43679 MIR369-201ENST00000362155 70 ntBASIC2.8□□□□□ -1.96
LDB2O43679 Y_RNA.404-201ENST00000383978 102 ntBASIC2.8□□□□□ -1.96
LDB2O43679 Y_RNA.473-201ENST00000384333 102 ntBASIC2.8□□□□□ -1.96
LDB2O43679 RNU6-790P-201ENST00000384479 105 ntBASIC2.8□□□□□ -1.96
LDB2O43679 BMS1P22-201ENST00000414726 313 ntBASIC2.8□□□□□ -1.96
LDB2O43679 USMG5P1-201ENST00000425964 177 ntBASIC2.8□□□□□ -1.96
LDB2O43679 AL714022.1-201ENST00000439897 151 ntBASIC2.8□□□□□ -1.96
LDB2O43679 HMGN2P10-201ENST00000448085 265 ntBASIC2.8□□□□□ -1.96
LDB2O43679 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.8□□□□□ -1.96
LDB2O43679 U8.21-201ENST00000459536 136 ntBASIC2.8□□□□□ -1.96
LDB2O43679 RPL9P9-202ENST00000466501 579 ntBASIC2.8□□□□□ -1.96
LDB2O43679 SNORA43.2-201ENST00000516652 128 ntBASIC2.8□□□□□ -1.96
LDB2O43679 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.8□□□□□ -1.96
LDB2O43679 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.8□□□□□ -1.96
LDB2O43679 MIR4506-201ENST00000584693 77 ntBASIC2.8□□□□□ -1.96
LDB2O43679 HMGN2P15-201ENST00000585707 270 ntBASIC2.8□□□□□ -1.96
LDB2O43679 AC005046.1-201ENST00000608515 625 ntBASIC2.8□□□□□ -1.96
LDB2O43679 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.8□□□□□ -1.96
LDB2O43679 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.8□□□□□ -1.96
LDB2O43679 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
LDB2O43679 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
LDB2O43679 RNU6-428P-201ENST00000362942 107 ntBASIC2.79□□□□□ -1.96
LDB2O43679 RNU6-942P-201ENST00000363002 107 ntBASIC2.79□□□□□ -1.96
LDB2O43679 Y_RNA.128-201ENST00000363391 112 ntBASIC2.79□□□□□ -1.96
LDB2O43679 RNU6-799P-201ENST00000363567 107 ntBASIC2.79□□□□□ -1.96
LDB2O43679 RNU6-1059P-201ENST00000363752 98 ntBASIC2.79□□□□□ -1.96
LDB2O43679 RNU6-1317P-201ENST00000364582 104 ntBASIC2.79□□□□□ -1.96
LDB2O43679 RNU1-100P-201ENST00000365255 165 ntBASIC2.79□□□□□ -1.96
LDB2O43679 RNU6-596P-201ENST00000365395 98 ntBASIC2.79□□□□□ -1.96
LDB2O43679 Y_RNA.395-201ENST00000383945 109 ntBASIC2.79□□□□□ -1.96
LDB2O43679 RNU6-1027P-201ENST00000383998 107 ntBASIC2.79□□□□□ -1.96
LDB2O43679 RNU6-198P-201ENST00000384258 104 ntBASIC2.79□□□□□ -1.96
LDB2O43679 SNORA75.6-201ENST00000391318 127 ntBASIC2.79□□□□□ -1.96
LDB2O43679 RPS29P13-201ENST00000402041 169 ntBASIC2.79□□□□□ -1.96
LDB2O43679 AL513475.1-201ENST00000406602 315 ntBASIC2.79□□□□□ -1.96
LDB2O43679 MIR548P-201ENST00000408336 84 ntBASIC2.79□□□□□ -1.96
LDB2O43679 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.79□□□□□ -1.96
LDB2O43679 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.79□□□□□ -1.96
LDB2O43679 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.79□□□□□ -1.96
LDB2O43679 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.79□□□□□ -1.96
LDB2O43679 AL135938.1-201ENST00000443141 297 ntBASIC2.79□□□□□ -1.96
LDB2O43679 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.79□□□□□ -1.96
LDB2O43679 FTH1P25-201ENST00000447665 469 ntBASIC2.79□□□□□ -1.96
LDB2O43679 RNU7-23P-201ENST00000459465 62 ntBASIC2.79□□□□□ -1.96
LDB2O43679 AC008571.1-201ENST00000467232 300 ntBASIC2.79□□□□□ -1.96
LDB2O43679 ACA59.1-201ENST00000515966 143 ntBASIC2.79□□□□□ -1.96
LDB2O43679 RNU6-307P-201ENST00000516743 106 ntBASIC2.79□□□□□ -1.96
LDB2O43679 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.79□□□□□ -1.96
LDB2O43679 AC020661.2-201ENST00000560114 134 ntBASIC2.79□□□□□ -1.96
LDB2O43679 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.79□□□□□ -1.96
LDB2O43679 AC109446.1-201ENST00000566172 220 ntBASIC2.79□□□□□ -1.96
LDB2O43679 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.79□□□□□ -1.96
LDB2O43679 MIR3605-201ENST00000583214 100 ntBASIC2.79□□□□□ -1.96
LDB2O43679 VN1R107P-201ENST00000601784 209 ntBASIC2.79□□□□□ -1.96
LDB2O43679 AC018889.1-201ENST00000605372 397 ntBASIC2.79□□□□□ -1.96
LDB2O43679 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.79□□□□□ -1.96
LDB2O43679 AC092435.3-201ENST00000565538 3654 ntBASIC2.79□□□□□ -1.96
LDB2O43679 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
LDB2O43679 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.79□□□□□ -1.96
LDB2O43679 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.78□□□□□ -1.96
LDB2O43679 AC233263.6-201ENST00000631132 1963 ntBASIC2.78□□□□□ -1.96
LDB2O43679 MIR26A1-201ENST00000362205 77 ntBASIC2.78□□□□□ -1.96
LDB2O43679 Y_RNA.2-201ENST00000362330 96 ntBASIC2.78□□□□□ -1.96
LDB2O43679 Y_RNA.197-201ENST00000364004 102 ntBASIC2.78□□□□□ -1.96
LDB2O43679 RNU6-336P-201ENST00000364891 107 ntBASIC2.78□□□□□ -1.96
LDB2O43679 RNU6-1040P-201ENST00000383974 107 ntBASIC2.78□□□□□ -1.96
LDB2O43679 RNU6-890P-201ENST00000384121 107 ntBASIC2.78□□□□□ -1.96
LDB2O43679 RNU6-842P-201ENST00000384269 107 ntBASIC2.78□□□□□ -1.96
LDB2O43679 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.78□□□□□ -1.96
LDB2O43679 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.78□□□□□ -1.96
LDB2O43679 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.78□□□□□ -1.96
LDB2O43679 Y_RNA.631-201ENST00000459607 101 ntBASIC2.78□□□□□ -1.96
LDB2O43679 SNORA9.3-201ENST00000516383 129 ntBASIC2.78□□□□□ -1.96
LDB2O43679 RNA5SP367-201ENST00000516557 118 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms