Protein–RNA interactions for Protein: O43300

LRRTM2, Leucine-rich repeat transmembrane neuronal protein 2, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM2O43300 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
LRRTM2O43300 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.19□□□□□ -2.06
LRRTM2O43300 RN7SKP158-201ENST00000410453 326 ntBASIC2.19□□□□□ -2.06
LRRTM2O43300 RNA5SP270-201ENST00000411361 118 ntBASIC2.19□□□□□ -2.06
LRRTM2O43300 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.19□□□□□ -2.06
LRRTM2O43300 MTCO1P20-201ENST00000425366 358 ntBASIC2.19□□□□□ -2.06
LRRTM2O43300 PTGES3P4-201ENST00000426243 356 ntBASIC2.19□□□□□ -2.06
LRRTM2O43300 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.19□□□□□ -2.06
LRRTM2O43300 AC004383.1-201ENST00000438135 289 ntBASIC2.19□□□□□ -2.06
LRRTM2O43300 SEPT14P3-201ENST00000439401 183 ntBASIC2.19□□□□□ -2.06
LRRTM2O43300 AL732372.2-207ENST00000445840 183 ntBASIC2.19□□□□□ -2.06
LRRTM2O43300 MTND3P16-201ENST00000452205 344 ntBASIC2.19□□□□□ -2.06
LRRTM2O43300 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.19□□□□□ -2.06
LRRTM2O43300 SEPT14P2-201ENST00000453405 183 ntBASIC2.19□□□□□ -2.06
LRRTM2O43300 MTCO3P38-201ENST00000468910 766 ntBASIC2.19□□□□□ -2.06
LRRTM2O43300 RPL7P43-201ENST00000478876 753 ntBASIC2.19□□□□□ -2.06
LRRTM2O43300 SEPT14P4-201ENST00000513445 186 ntBASIC2.19□□□□□ -2.06
LRRTM2O43300 Y_RNA.676-201ENST00000516393 96 ntBASIC2.19□□□□□ -2.06
LRRTM2O43300 FO082796.1-201ENST00000523795 183 ntBASIC2.19□□□□□ -2.06
LRRTM2O43300 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.19□□□□□ -2.06
LRRTM2O43300 PRELID2P1-201ENST00000552837 301 ntBASIC2.19□□□□□ -2.06
LRRTM2O43300 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.19□□□□□ -2.06
LRRTM2O43300 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.19□□□□□ -2.06
LRRTM2O43300 RMST_3.1-201ENST00000611651 109 ntBASIC2.19□□□□□ -2.06
LRRTM2O43300 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.19□□□□□ -2.06
LRRTM2O43300 RMST_7.1-201ENST00000621935 268 ntBASIC2.19□□□□□ -2.06
LRRTM2O43300 AL031601.2-202ENST00000622650 282 ntBASIC2.19□□□□□ -2.06
LRRTM2O43300 MTND4P5-201ENST00000435821 1374 ntBASIC2.19□□□□□ -2.06
LRRTM2O43300 AL109809.4-201ENST00000603520 2185 ntBASIC2.19□□□□□ -2.06
LRRTM2O43300 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.19□□□□□ -2.06
LRRTM2O43300 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
LRRTM2O43300 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
LRRTM2O43300 Y_RNA.9-201ENST00000362354 101 ntBASIC2.18□□□□□ -2.06
LRRTM2O43300 SNORD114-1-201ENST00000362705 72 ntBASIC2.18□□□□□ -2.06
LRRTM2O43300 RNA5SP456-201ENST00000364002 114 ntBASIC2.18□□□□□ -2.06
LRRTM2O43300 RNU6-534P-201ENST00000364877 106 ntBASIC2.18□□□□□ -2.06
LRRTM2O43300 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
LRRTM2O43300 Y_RNA.402-201ENST00000383972 102 ntBASIC2.18□□□□□ -2.06
LRRTM2O43300 SNORA41-201ENST00000384675 132 ntBASIC2.18□□□□□ -2.06
LRRTM2O43300 AL606923.1-201ENST00000406616 190 ntBASIC2.18□□□□□ -2.06
LRRTM2O43300 FTH1P15-201ENST00000406984 280 ntBASIC2.18□□□□□ -2.06
LRRTM2O43300 USP9YP27-201ENST00000418455 438 ntBASIC2.18□□□□□ -2.06
LRRTM2O43300 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.18□□□□□ -2.06
LRRTM2O43300 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.18□□□□□ -2.06
LRRTM2O43300 CALM1P1-201ENST00000442082 433 ntBASIC2.18□□□□□ -2.06
LRRTM2O43300 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.18□□□□□ -2.06
LRRTM2O43300 AC096638.1-201ENST00000444678 216 ntBASIC2.18□□□□□ -2.06
LRRTM2O43300 BTF3P15-201ENST00000455606 336 ntBASIC2.18□□□□□ -2.06
LRRTM2O43300 RNU7-167P-201ENST00000459160 62 ntBASIC2.18□□□□□ -2.06
LRRTM2O43300 MTAPP1-201ENST00000489154 819 ntBASIC2.18□□□□□ -2.06
LRRTM2O43300 HMGB1P30-201ENST00000492455 606 ntBASIC2.18□□□□□ -2.06
LRRTM2O43300 RPL38P4-201ENST00000502376 214 ntBASIC2.18□□□□□ -2.06
LRRTM2O43300 AC116655.1-201ENST00000508324 901 ntBASIC2.18□□□□□ -2.06
LRRTM2O43300 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
LRRTM2O43300 AC074344.1-201ENST00000512823 224 ntBASIC2.18□□□□□ -2.06
LRRTM2O43300 Y_RNA.687-201ENST00000516558 91 ntBASIC2.18□□□□□ -2.06
LRRTM2O43300 CENPUP1-201ENST00000526649 1202 ntBASIC2.18□□□□□ -2.06
LRRTM2O43300 AC109635.3-201ENST00000529536 185 ntBASIC2.18□□□□□ -2.06
LRRTM2O43300 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.18□□□□□ -2.06
LRRTM2O43300 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.18□□□□□ -2.06
LRRTM2O43300 AC123912.5-201ENST00000605470 343 ntBASIC2.18□□□□□ -2.06
LRRTM2O43300 AC046143.2-201ENST00000609789 160 ntBASIC2.18□□□□□ -2.06
LRRTM2O43300 MIR6840-201ENST00000611937 71 ntBASIC2.18□□□□□ -2.06
LRRTM2O43300 U4atac.1-201ENST00000618345 95 ntBASIC2.18□□□□□ -2.06
LRRTM2O43300 U6.42-201ENST00000618440 107 ntBASIC2.18□□□□□ -2.06
LRRTM2O43300 MIR6873-201ENST00000622788 63 ntBASIC2.18□□□□□ -2.06
LRRTM2O43300 AC138627.2-201ENST00000624202 601 ntBASIC2.18□□□□□ -2.06
LRRTM2O43300 Z69720.2-201ENST00000624755 279 ntBASIC2.18□□□□□ -2.06
LRRTM2O43300 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.18□□□□□ -2.06
LRRTM2O43300 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.18□□□□□ -2.06
LRRTM2O43300 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.17□□□□□ -2.06
LRRTM2O43300 ZNF720P1-201ENST00000562403 1939 ntBASIC2.17□□□□□ -2.06
LRRTM2O43300 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
LRRTM2O43300 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
LRRTM2O43300 Y_RNA.378-201ENST00000365652 113 ntBASIC2.17□□□□□ -2.06
LRRTM2O43300 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.17□□□□□ -2.06
LRRTM2O43300 FCF1P9-201ENST00000412546 282 ntBASIC2.17□□□□□ -2.06
LRRTM2O43300 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.17□□□□□ -2.06
LRRTM2O43300 ZNF885P-201ENST00000420174 1098 ntBASIC2.17□□□□□ -2.06
LRRTM2O43300 PGBD4P6-201ENST00000421501 610 ntBASIC2.17□□□□□ -2.06
LRRTM2O43300 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.17□□□□□ -2.06
LRRTM2O43300 AL603825.1-201ENST00000438481 80 ntBASIC2.17□□□□□ -2.06
LRRTM2O43300 PRPS1P1-201ENST00000445305 876 ntBASIC2.17□□□□□ -2.06
LRRTM2O43300 FGF7P6-202ENST00000451282 293 ntBASIC2.17□□□□□ -2.06
LRRTM2O43300 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.17□□□□□ -2.06
LRRTM2O43300 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.17□□□□□ -2.06
LRRTM2O43300 AP001324.2-201ENST00000461163 319 ntBASIC2.17□□□□□ -2.06
LRRTM2O43300 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.17□□□□□ -2.06
LRRTM2O43300 RPL22P13-201ENST00000493291 347 ntBASIC2.17□□□□□ -2.06
LRRTM2O43300 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.17□□□□□ -2.06
LRRTM2O43300 AC107222.1-201ENST00000510899 637 ntBASIC2.17□□□□□ -2.06
LRRTM2O43300 RNU6-991P-201ENST00000516168 107 ntBASIC2.17□□□□□ -2.06
LRRTM2O43300 SNORD60.2-201ENST00000516883 86 ntBASIC2.17□□□□□ -2.06
LRRTM2O43300 ACA59.2-201ENST00000517061 156 ntBASIC2.17□□□□□ -2.06
LRRTM2O43300 CBX3P7-201ENST00000532876 502 ntBASIC2.17□□□□□ -2.06
LRRTM2O43300 AC136619.2-201ENST00000563361 631 ntBASIC2.17□□□□□ -2.06
LRRTM2O43300 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC2.17□□□□□ -2.06
LRRTM2O43300 AC002044.1-201ENST00000606707 158 ntBASIC2.17□□□□□ -2.06
LRRTM2O43300 AL353997.5-201ENST00000618886 171 ntBASIC2.17□□□□□ -2.06
LRRTM2O43300 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms