Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PHGDHO43175 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.12□□□□□ -1.91
PHGDHO43175 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
PHGDHO43175 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PHGDHO43175 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.12□□□□□ -1.91
PHGDHO43175 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.12□□□□□ -1.91
PHGDHO43175 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.12□□□□□ -1.91
PHGDHO43175 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
PHGDHO43175 SNORD21-201ENST00000383953 95 ntBASIC3.12□□□□□ -1.91
PHGDHO43175 Y_RNA.504-201ENST00000384481 104 ntBASIC3.12□□□□□ -1.91
PHGDHO43175 SNORA41-201ENST00000384675 132 ntBASIC3.12□□□□□ -1.91
PHGDHO43175 AL512633.1-201ENST00000399931 655 ntBASIC3.12□□□□□ -1.91
PHGDHO43175 RN7SKP58-201ENST00000411010 305 ntBASIC3.12□□□□□ -1.91
PHGDHO43175 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.12□□□□□ -1.91
PHGDHO43175 AC005534.2-201ENST00000431047 433 ntBASIC3.12□□□□□ -1.91
PHGDHO43175 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.12□□□□□ -1.91
PHGDHO43175 AL353997.1-201ENST00000432936 108 ntBASIC3.12□□□□□ -1.91
PHGDHO43175 MTCYBP6-201ENST00000441810 138 ntBASIC3.12□□□□□ -1.91
PHGDHO43175 RPS12P18-201ENST00000442381 270 ntBASIC3.12□□□□□ -1.91
PHGDHO43175 AC079354.2-201ENST00000453523 154 ntBASIC3.12□□□□□ -1.91
PHGDHO43175 RN7SL293P-201ENST00000481765 281 ntBASIC3.12□□□□□ -1.91
PHGDHO43175 AC006445.1-201ENST00000491925 405 ntBASIC3.12□□□□□ -1.91
PHGDHO43175 AC104564.1-201ENST00000493028 407 ntBASIC3.12□□□□□ -1.91
PHGDHO43175 RPL22P13-201ENST00000493291 347 ntBASIC3.12□□□□□ -1.91
PHGDHO43175 AC016632.1-201ENST00000503994 196 ntBASIC3.12□□□□□ -1.91
PHGDHO43175 RNU6-264P-201ENST00000517134 104 ntBASIC3.12□□□□□ -1.91
PHGDHO43175 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.12□□□□□ -1.91
PHGDHO43175 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.12□□□□□ -1.91
PHGDHO43175 MIR4444-1-201ENST00000581696 74 ntBASIC3.12□□□□□ -1.91
PHGDHO43175 MIR4444-2-201ENST00000584390 74 ntBASIC3.12□□□□□ -1.91
PHGDHO43175 MIR4506-201ENST00000584693 77 ntBASIC3.12□□□□□ -1.91
PHGDHO43175 AL158827.2-201ENST00000602494 330 ntBASIC3.12□□□□□ -1.91
PHGDHO43175 CYP2C61P-201ENST00000604072 290 ntBASIC3.12□□□□□ -1.91
PHGDHO43175 AL080274.1-201ENST00000605565 220 ntBASIC3.12□□□□□ -1.91
PHGDHO43175 AL691447.3-201ENST00000635020 330 ntBASIC3.12□□□□□ -1.91
PHGDHO43175 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
PHGDHO43175 MTND5P30-201ENST00000452896 1731 ntBASIC3.12□□□□□ -1.91
PHGDHO43175 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.12□□□□□ -1.91
PHGDHO43175 MTCO1P12-201ENST00000414273 1543 ntBASIC3.12□□□□□ -1.91
PHGDHO43175 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PHGDHO43175 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.12□□□□□ -1.91
PHGDHO43175 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.12□□□□□ -1.91
PHGDHO43175 ZNF299P-201ENST00000406845 1804 ntBASIC3.12□□□□□ -1.91
PHGDHO43175 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PHGDHO43175 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.11□□□□□ -1.91
PHGDHO43175 SNORA51.4-201ENST00000364993 124 ntBASIC3.11□□□□□ -1.91
PHGDHO43175 SNORD42.2-201ENST00000365570 69 ntBASIC3.11□□□□□ -1.91
PHGDHO43175 RNU6-1040P-201ENST00000383974 107 ntBASIC3.11□□□□□ -1.91
PHGDHO43175 RNU6-142P-201ENST00000384019 107 ntBASIC3.11□□□□□ -1.91
PHGDHO43175 RNU6-968P-201ENST00000384076 107 ntBASIC3.11□□□□□ -1.91
PHGDHO43175 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
PHGDHO43175 AL357075.1-201ENST00000404107 726 ntBASIC3.11□□□□□ -1.91
PHGDHO43175 MIR1289-1-201ENST00000408836 144 ntBASIC3.11□□□□□ -1.91
PHGDHO43175 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.11□□□□□ -1.91
PHGDHO43175 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.11□□□□□ -1.91
PHGDHO43175 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.11□□□□□ -1.91
PHGDHO43175 AC244670.1-201ENST00000436879 112 ntBASIC3.11□□□□□ -1.91
PHGDHO43175 CYCSP35-201ENST00000451978 304 ntBASIC3.11□□□□□ -1.91
PHGDHO43175 AC022447.4-201ENST00000504053 364 ntBASIC3.11□□□□□ -1.91
PHGDHO43175 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.11□□□□□ -1.91
PHGDHO43175 AC022493.2-201ENST00000506122 481 ntBASIC3.11□□□□□ -1.91
PHGDHO43175 SLC25A15P5-201ENST00000508033 253 ntBASIC3.11□□□□□ -1.91
PHGDHO43175 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.11□□□□□ -1.91
PHGDHO43175 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.11□□□□□ -1.91
PHGDHO43175 AC115990.1-201ENST00000526957 301 ntBASIC3.11□□□□□ -1.91
PHGDHO43175 MRPS36P4-201ENST00000534436 298 ntBASIC3.11□□□□□ -1.91
PHGDHO43175 AC079598.5-201ENST00000547460 117 ntBASIC3.11□□□□□ -1.91
PHGDHO43175 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.11□□□□□ -1.91
PHGDHO43175 AC020661.2-201ENST00000560114 134 ntBASIC3.11□□□□□ -1.91
PHGDHO43175 MIR5696-201ENST00000578474 85 ntBASIC3.11□□□□□ -1.91
PHGDHO43175 RPL23AP78-201ENST00000599928 470 ntBASIC3.11□□□□□ -1.91
PHGDHO43175 AC073410.2-201ENST00000603240 332 ntBASIC3.11□□□□□ -1.91
PHGDHO43175 AC084757.4-201ENST00000616350 526 ntBASIC3.11□□□□□ -1.91
PHGDHO43175 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.11□□□□□ -1.91
PHGDHO43175 MIR7515-201ENST00000637837 67 ntBASIC3.11□□□□□ -1.91
PHGDHO43175 MAPK10-362ENST00000641864 4484 ntBASIC3.11□□□□□ -1.91
PHGDHO43175 AC093831.2-201ENST00000624393 3427 ntBASIC3.11□□□□□ -1.91
PHGDHO43175 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
PHGDHO43175 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.11□□□□□ -1.91
PHGDHO43175 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PHGDHO43175 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
PHGDHO43175 Z75746.1-201ENST00000440243 2080 ntBASIC3.1□□□□□ -1.91
PHGDHO43175 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PHGDHO43175 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PHGDHO43175 RNU6-529P-201ENST00000363383 104 ntBASIC3.1□□□□□ -1.91
PHGDHO43175 Y_RNA.216-201ENST00000364205 93 ntBASIC3.1□□□□□ -1.91
PHGDHO43175 RN7SKP61-201ENST00000410642 295 ntBASIC3.1□□□□□ -1.91
PHGDHO43175 AC097463.2-201ENST00000421074 142 ntBASIC3.1□□□□□ -1.91
PHGDHO43175 AC078809.1-201ENST00000427601 140 ntBASIC3.1□□□□□ -1.91
PHGDHO43175 AC011816.1-201ENST00000441346 546 ntBASIC3.1□□□□□ -1.91
PHGDHO43175 GPM6BP3-201ENST00000442797 145 ntBASIC3.1□□□□□ -1.91
PHGDHO43175 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC3.1□□□□□ -1.91
PHGDHO43175 AL513124.1-201ENST00000450410 614 ntBASIC3.1□□□□□ -1.91
PHGDHO43175 UQCRHP3-201ENST00000451503 251 ntBASIC3.1□□□□□ -1.91
PHGDHO43175 RNA5SP385-201ENST00000515947 110 ntBASIC3.1□□□□□ -1.91
PHGDHO43175 AC109329.1-201ENST00000518744 317 ntBASIC3.1□□□□□ -1.91
PHGDHO43175 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.1□□□□□ -1.91
PHGDHO43175 MIR3944-201ENST00000581277 108 ntBASIC3.1□□□□□ -1.91
PHGDHO43175 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.1□□□□□ -1.91
PHGDHO43175 AC005014.2-201ENST00000607795 599 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms