Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 snoU13.30-201ENST00000458951 104 ntBASIC0.62□□□□□ -2.31
HMGB3O15347 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.62□□□□□ -2.31
HMGB3O15347 PSMC1P5-201ENST00000512850 177 ntBASIC0.62□□□□□ -2.31
HMGB3O15347 RNU5F-2P-201ENST00000516066 82 ntBASIC0.62□□□□□ -2.31
HMGB3O15347 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC0.62□□□□□ -2.31
HMGB3O15347 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC0.62□□□□□ -2.31
HMGB3O15347 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.62□□□□□ -2.31
HMGB3O15347 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC0.62□□□□□ -2.31
HMGB3O15347 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC0.62□□□□□ -2.31
HMGB3O15347 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.62□□□□□ -2.31
HMGB3O15347 MTCO2P2-201ENST00000591258 225 ntBASIC0.62□□□□□ -2.31
HMGB3O15347 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.62□□□□□ -2.31
HMGB3O15347 AC091895.1-201ENST00000624494 256 ntBASIC0.62□□□□□ -2.31
HMGB3O15347 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC0.62□□□□□ -2.31
HMGB3O15347 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
HMGB3O15347 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
HMGB3O15347 SNORD56.1-201ENST00000362913 68 ntBASIC0.61□□□□□ -2.31
HMGB3O15347 Y_RNA.311-201ENST00000365068 96 ntBASIC0.61□□□□□ -2.31
HMGB3O15347 SNORA50A-201ENST00000384225 134 ntBASIC0.61□□□□□ -2.31
HMGB3O15347 SNORA11.2-201ENST00000408318 127 ntBASIC0.61□□□□□ -2.31
HMGB3O15347 AC114482.1-201ENST00000418010 247 ntBASIC0.61□□□□□ -2.31
HMGB3O15347 AC007969.2-201ENST00000441891 191 ntBASIC0.61□□□□□ -2.31
HMGB3O15347 HSPE1P13-201ENST00000451143 297 ntBASIC0.61□□□□□ -2.31
HMGB3O15347 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.61□□□□□ -2.31
HMGB3O15347 RPL23AP94-201ENST00000512518 302 ntBASIC0.61□□□□□ -2.31
HMGB3O15347 Y_RNA.687-201ENST00000516558 91 ntBASIC0.61□□□□□ -2.31
HMGB3O15347 AP003355.1-201ENST00000518956 587 ntBASIC0.61□□□□□ -2.31
HMGB3O15347 AC136628.3-201ENST00000521868 290 ntBASIC0.61□□□□□ -2.31
HMGB3O15347 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.61□□□□□ -2.31
HMGB3O15347 MIR3146-201ENST00000580367 79 ntBASIC0.61□□□□□ -2.31
HMGB3O15347 AC009977.1-201ENST00000586015 570 ntBASIC0.61□□□□□ -2.31
HMGB3O15347 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC0.61□□□□□ -2.31
HMGB3O15347 VN1R80P-201ENST00000597126 338 ntBASIC0.61□□□□□ -2.31
HMGB3O15347 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC0.61□□□□□ -2.31
HMGB3O15347 MTATP6P2-201ENST00000603319 678 ntBASIC0.61□□□□□ -2.31
HMGB3O15347 AL590095.2-201ENST00000604136 117 ntBASIC0.61□□□□□ -2.31
HMGB3O15347 AL451064.1-201ENST00000607718 471 ntBASIC0.61□□□□□ -2.31
HMGB3O15347 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.61□□□□□ -2.31
HMGB3O15347 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
HMGB3O15347 RNU6-560P-201ENST00000364007 108 ntBASIC0.6□□□□□ -2.31
HMGB3O15347 AL356776.1-201ENST00000406574 447 ntBASIC0.6□□□□□ -2.31
HMGB3O15347 VPS26BP1-201ENST00000417155 755 ntBASIC0.6□□□□□ -2.31
HMGB3O15347 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.6□□□□□ -2.31
HMGB3O15347 AC010099.3-201ENST00000423896 409 ntBASIC0.6□□□□□ -2.31
HMGB3O15347 AC010095.1-201ENST00000443543 144 ntBASIC0.6□□□□□ -2.31
HMGB3O15347 snoU13.27-201ENST00000459278 104 ntBASIC0.6□□□□□ -2.31
HMGB3O15347 COX6CP14-201ENST00000469580 174 ntBASIC0.6□□□□□ -2.31
HMGB3O15347 ARL2BPP4-201ENST00000506854 471 ntBASIC0.6□□□□□ -2.31
HMGB3O15347 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.6□□□□□ -2.31
HMGB3O15347 AC112206.3-201ENST00000514578 389 ntBASIC0.6□□□□□ -2.31
HMGB3O15347 RNU6-197P-201ENST00000516680 100 ntBASIC0.6□□□□□ -2.31
HMGB3O15347 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.6□□□□□ -2.31
HMGB3O15347 AC108706.1-201ENST00000611053 297 ntBASIC0.6□□□□□ -2.31
HMGB3O15347 FRG1KP-201ENST00000623592 341 ntBASIC0.6□□□□□ -2.31
HMGB3O15347 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC0.6□□□□□ -2.31
HMGB3O15347 AC068647.2-201ENST00000637380 353 ntBASIC0.6□□□□□ -2.31
HMGB3O15347 AL163152.1-201ENST00000642001 374 ntBASIC0.6□□□□□ -2.31
HMGB3O15347 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.6□□□□□ -2.31
HMGB3O15347 RNU4-15P-201ENST00000362613 141 ntBASIC0.59□□□□□ -2.31
HMGB3O15347 RNU6-462P-201ENST00000362659 105 ntBASIC0.59□□□□□ -2.31
HMGB3O15347 RNU6-862P-201ENST00000362804 105 ntBASIC0.59□□□□□ -2.31
HMGB3O15347 RNU6-224P-201ENST00000384055 107 ntBASIC0.59□□□□□ -2.31
HMGB3O15347 MIR608-201ENST00000384820 100 ntBASIC0.59□□□□□ -2.31
HMGB3O15347 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC0.59□□□□□ -2.31
HMGB3O15347 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC0.59□□□□□ -2.31
HMGB3O15347 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC0.59□□□□□ -2.31
HMGB3O15347 AC004941.2-201ENST00000427009 228 ntBASIC0.59□□□□□ -2.31
HMGB3O15347 RNA5SP216-201ENST00000516111 123 ntBASIC0.59□□□□□ -2.31
HMGB3O15347 SNORA70.22-201ENST00000517160 124 ntBASIC0.59□□□□□ -2.31
HMGB3O15347 RNU6-165P-201ENST00000517170 99 ntBASIC0.59□□□□□ -2.31
HMGB3O15347 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC0.59□□□□□ -2.31
HMGB3O15347 KC877982.1-201ENST00000602313 470 ntBASIC0.59□□□□□ -2.31
HMGB3O15347 AC107304.1-201ENST00000604229 296 ntBASIC0.59□□□□□ -2.31
HMGB3O15347 MIR3976-201ENST00000606807 139 ntBASIC0.59□□□□□ -2.31
HMGB3O15347 AC245297.2-201ENST00000610119 565 ntBASIC0.59□□□□□ -2.31
HMGB3O15347 AC245060.5-201ENST00000610778 3293 ntBASIC0.58□□□□□ -2.32
HMGB3O15347 RNU5E-6P-201ENST00000365574 115 ntBASIC0.58□□□□□ -2.32
HMGB3O15347 RNU6-946P-201ENST00000383878 107 ntBASIC0.58□□□□□ -2.32
HMGB3O15347 RNU6-190P-201ENST00000384154 102 ntBASIC0.58□□□□□ -2.32
HMGB3O15347 RNU6-331P-201ENST00000384724 107 ntBASIC0.58□□□□□ -2.32
HMGB3O15347 SNORA12-201ENST00000391162 147 ntBASIC0.58□□□□□ -2.32
HMGB3O15347 MTCO1P21-201ENST00000416634 589 ntBASIC0.58□□□□□ -2.32
HMGB3O15347 ARL5AP1-201ENST00000418991 388 ntBASIC0.58□□□□□ -2.32
HMGB3O15347 AC108667.1-201ENST00000428618 249 ntBASIC0.58□□□□□ -2.32
HMGB3O15347 AL591806.2-201ENST00000433122 173 ntBASIC0.58□□□□□ -2.32
HMGB3O15347 SNRPEP8-201ENST00000442866 260 ntBASIC0.58□□□□□ -2.32
HMGB3O15347 ATP5J2P3-201ENST00000451550 258 ntBASIC0.58□□□□□ -2.32
HMGB3O15347 TRBVA-201ENST00000498804 316 ntBASIC0.58□□□□□ -2.32
HMGB3O15347 MTCO3P27-201ENST00000514397 196 ntBASIC0.58□□□□□ -2.32
HMGB3O15347 Y_RNA.689-201ENST00000516589 107 ntBASIC0.58□□□□□ -2.32
HMGB3O15347 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC0.58□□□□□ -2.32
HMGB3O15347 BNIP3P8-201ENST00000597863 560 ntBASIC0.58□□□□□ -2.32
HMGB3O15347 AL596327.1-201ENST00000603629 213 ntBASIC0.58□□□□□ -2.32
HMGB3O15347 AC105129.3-201ENST00000605455 485 ntBASIC0.58□□□□□ -2.32
HMGB3O15347 AC040896.1-201ENST00000613819 479 ntBASIC0.58□□□□□ -2.32
HMGB3O15347 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.58□□□□□ -2.32
HMGB3O15347 RMST_7.1-201ENST00000621935 268 ntBASIC0.58□□□□□ -2.32
HMGB3O15347 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.58□□□□□ -2.32
HMGB3O15347 AC092104.1-201ENST00000497346 1441 ntBASIC0.57□□□□□ -2.32
HMGB3O15347 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms