Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
SOX1O00570 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.19□□□□□ -1.74
SOX1O00570 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SOX1O00570 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC4.19□□□□□ -1.74
SOX1O00570 RNA5SP399-201ENST00000364003 117 ntBASIC4.19□□□□□ -1.74
SOX1O00570 SNORA7.2-201ENST00000364446 145 ntBASIC4.19□□□□□ -1.74
SOX1O00570 RNU6-1141P-201ENST00000364520 107 ntBASIC4.19□□□□□ -1.74
SOX1O00570 Y_RNA.262-201ENST00000364641 102 ntBASIC4.19□□□□□ -1.74
SOX1O00570 RNU1-140P-201ENST00000365040 165 ntBASIC4.19□□□□□ -1.74
SOX1O00570 Y_RNA.441-201ENST00000384123 112 ntBASIC4.19□□□□□ -1.74
SOX1O00570 MIR544A-201ENST00000384855 91 ntBASIC4.19□□□□□ -1.74
SOX1O00570 U3.39-201ENST00000408569 239 ntBASIC4.19□□□□□ -1.74
SOX1O00570 MIR1179-201ENST00000408703 91 ntBASIC4.19□□□□□ -1.74
SOX1O00570 Y_RNA.595-201ENST00000410403 105 ntBASIC4.19□□□□□ -1.74
SOX1O00570 HMGN2P30-201ENST00000423237 256 ntBASIC4.19□□□□□ -1.74
SOX1O00570 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.19□□□□□ -1.74
SOX1O00570 AL512844.2-201ENST00000433990 593 ntBASIC4.19□□□□□ -1.74
SOX1O00570 RPL37P4-201ENST00000448908 268 ntBASIC4.19□□□□□ -1.74
SOX1O00570 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.19□□□□□ -1.74
SOX1O00570 RPS4XP22-201ENST00000480755 780 ntBASIC4.19□□□□□ -1.74
SOX1O00570 RPL29P14-201ENST00000495837 428 ntBASIC4.19□□□□□ -1.74
SOX1O00570 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.19□□□□□ -1.74
SOX1O00570 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC4.19□□□□□ -1.74
SOX1O00570 RNU6-1219P-201ENST00000516143 112 ntBASIC4.19□□□□□ -1.74
SOX1O00570 Vault.1-201ENST00000516474 102 ntBASIC4.19□□□□□ -1.74
SOX1O00570 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.19□□□□□ -1.74
SOX1O00570 HSPE1P4-201ENST00000550617 308 ntBASIC4.19□□□□□ -1.74
SOX1O00570 AC022441.3-201ENST00000605737 136 ntBASIC4.19□□□□□ -1.74
SOX1O00570 AC005828.6-201ENST00000606610 232 ntBASIC4.19□□□□□ -1.74
SOX1O00570 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC4.19□□□□□ -1.74
SOX1O00570 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SOX1O00570 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SOX1O00570 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
SOX1O00570 MFSD8-236ENST00000641509 4050 ntBASIC4.18□□□□□ -1.74
SOX1O00570 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.18□□□□□ -1.74
SOX1O00570 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.18□□□□□ -1.74
SOX1O00570 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SOX1O00570 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.18□□□□□ -1.74
SOX1O00570 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SOX1O00570 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SOX1O00570 RNU5F-3P-201ENST00000363767 117 ntBASIC4.18□□□□□ -1.74
SOX1O00570 RNU1-100P-201ENST00000365255 165 ntBASIC4.18□□□□□ -1.74
SOX1O00570 U3.19-201ENST00000390893 196 ntBASIC4.18□□□□□ -1.74
SOX1O00570 Y_RNA.597-201ENST00000410463 100 ntBASIC4.18□□□□□ -1.74
SOX1O00570 OOSP1P1-201ENST00000423265 274 ntBASIC4.18□□□□□ -1.74
SOX1O00570 AC078809.1-201ENST00000427601 140 ntBASIC4.18□□□□□ -1.74
SOX1O00570 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC4.18□□□□□ -1.74
SOX1O00570 AL356535.1-201ENST00000440335 398 ntBASIC4.18□□□□□ -1.74
SOX1O00570 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.18□□□□□ -1.74
SOX1O00570 RNA5SP54-201ENST00000516951 92 ntBASIC4.18□□□□□ -1.74
SOX1O00570 CYCSP23-201ENST00000519781 313 ntBASIC4.18□□□□□ -1.74
SOX1O00570 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.18□□□□□ -1.74
SOX1O00570 MIR4308-201ENST00000580634 81 ntBASIC4.18□□□□□ -1.74
SOX1O00570 AC006023.1-201ENST00000603944 259 ntBASIC4.18□□□□□ -1.74
SOX1O00570 MIR7112-201ENST00000616126 65 ntBASIC4.18□□□□□ -1.74
SOX1O00570 MESTIT1_1.1-201ENST00000618871 140 ntBASIC4.18□□□□□ -1.74
SOX1O00570 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.18□□□□□ -1.74
SOX1O00570 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
SOX1O00570 AL109809.4-201ENST00000603520 2185 ntBASIC4.18□□□□□ -1.74
SOX1O00570 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
SOX1O00570 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
SOX1O00570 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC4.18□□□□□ -1.74
SOX1O00570 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SOX1O00570 MAPK10-286ENST00000641208 8747 ntBASIC4.18□□□□□ -1.74
SOX1O00570 AC058791.1-201ENST00000608412 3198 ntBASIC4.18□□□□□ -1.74
SOX1O00570 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
SOX1O00570 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.17□□□□□ -1.74
SOX1O00570 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.17□□□□□ -1.74
SOX1O00570 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.17□□□□□ -1.74
SOX1O00570 AC022336.2-201ENST00000568966 2538 ntBASIC4.17□□□□□ -1.74
SOX1O00570 AC027290.2-201ENST00000623210 18662 ntBASIC4.17□□□□□ -1.74
SOX1O00570 Y_RNA.217-201ENST00000364214 105 ntBASIC4.17□□□□□ -1.74
SOX1O00570 RNU6-1117P-201ENST00000384525 104 ntBASIC4.17□□□□□ -1.74
SOX1O00570 MIR487A-201ENST00000385009 80 ntBASIC4.17□□□□□ -1.74
SOX1O00570 RN7SKP61-201ENST00000410642 295 ntBASIC4.17□□□□□ -1.74
SOX1O00570 BMS1P22-201ENST00000414726 313 ntBASIC4.17□□□□□ -1.74
SOX1O00570 RPL21P66-201ENST00000426566 466 ntBASIC4.17□□□□□ -1.74
SOX1O00570 AC010095.1-201ENST00000443543 144 ntBASIC4.17□□□□□ -1.74
SOX1O00570 AC005042.3-201ENST00000453230 174 ntBASIC4.17□□□□□ -1.74
SOX1O00570 RPL23AP3-201ENST00000453844 468 ntBASIC4.17□□□□□ -1.74
SOX1O00570 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SOX1O00570 Y_RNA.641-201ENST00000459414 105 ntBASIC4.17□□□□□ -1.74
SOX1O00570 SNRPGP7-201ENST00000469016 106 ntBASIC4.17□□□□□ -1.74
SOX1O00570 AC233702.9-201ENST00000581528 203 ntBASIC4.17□□□□□ -1.74
SOX1O00570 RNU1-30P-201ENST00000606575 163 ntBASIC4.17□□□□□ -1.74
SOX1O00570 AC010999.1-201ENST00000611856 324 ntBASIC4.17□□□□□ -1.74
SOX1O00570 AL136964.1-201ENST00000622038 2990 ntBASIC4.17□□□□□ -1.74
SOX1O00570 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SOX1O00570 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SOX1O00570 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
SOX1O00570 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.16□□□□□ -1.74
SOX1O00570 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
SOX1O00570 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SOX1O00570 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.16□□□□□ -1.74
SOX1O00570 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
SOX1O00570 ZNF204P-201ENST00000416749 2397 ntBASIC4.16□□□□□ -1.74
SOX1O00570 MIR449A-201ENST00000362113 91 ntBASIC4.16□□□□□ -1.74
SOX1O00570 RNA5SP374-201ENST00000362939 125 ntBASIC4.16□□□□□ -1.74
SOX1O00570 SNORD35B-201ENST00000363660 87 ntBASIC4.16□□□□□ -1.74
SOX1O00570 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms