Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.34□□□□□ -2.03
RTCAO00442 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.34□□□□□ -2.03
RTCAO00442 AC013470.1-201ENST00000453438 462 ntBASIC2.34□□□□□ -2.03
RTCAO00442 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.34□□□□□ -2.03
RTCAO00442 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.34□□□□□ -2.03
RTCAO00442 RPS27P27-201ENST00000498779 255 ntBASIC2.34□□□□□ -2.03
RTCAO00442 MTCYBP40-201ENST00000509390 1135 ntBASIC2.34□□□□□ -2.03
RTCAO00442 RNU6-189P-201ENST00000516120 101 ntBASIC2.34□□□□□ -2.03
RTCAO00442 AC109479.2-201ENST00000517842 174 ntBASIC2.34□□□□□ -2.03
RTCAO00442 AC078814.3-201ENST00000553036 491 ntBASIC2.34□□□□□ -2.03
RTCAO00442 AL118558.2-201ENST00000556294 238 ntBASIC2.34□□□□□ -2.03
RTCAO00442 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.34□□□□□ -2.03
RTCAO00442 AL356575.1-201ENST00000603008 283 ntBASIC2.34□□□□□ -2.03
RTCAO00442 RNU6-89P-201ENST00000606519 100 ntBASIC2.34□□□□□ -2.03
RTCAO00442 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
RTCAO00442 AC026585.1-201ENST00000619582 524 ntBASIC2.34□□□□□ -2.03
RTCAO00442 AL162373.1-201ENST00000620433 407 ntBASIC2.34□□□□□ -2.03
RTCAO00442 SDR42E1P4-201ENST00000620894 481 ntBASIC2.34□□□□□ -2.03
RTCAO00442 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.04
RTCAO00442 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.04
RTCAO00442 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
RTCAO00442 RNU6-1159P-201ENST00000362933 107 ntBASIC2.33□□□□□ -2.04
RTCAO00442 RNU6-529P-201ENST00000363383 104 ntBASIC2.33□□□□□ -2.04
RTCAO00442 RNU6-1090P-201ENST00000364065 94 ntBASIC2.33□□□□□ -2.04
RTCAO00442 Y_RNA.256-201ENST00000364594 104 ntBASIC2.33□□□□□ -2.04
RTCAO00442 SNORA16B-201ENST00000364674 135 ntBASIC2.33□□□□□ -2.04
RTCAO00442 RNU6-534P-201ENST00000364877 106 ntBASIC2.33□□□□□ -2.04
RTCAO00442 RNU4-12P-201ENST00000365233 139 ntBASIC2.33□□□□□ -2.04
RTCAO00442 SNORA25B-201ENST00000365507 128 ntBASIC2.33□□□□□ -2.04
RTCAO00442 SNORD37.1-201ENST00000390968 65 ntBASIC2.33□□□□□ -2.04
RTCAO00442 AL445529.1-201ENST00000398713 389 ntBASIC2.33□□□□□ -2.04
RTCAO00442 MIR1277-201ENST00000408536 78 ntBASIC2.33□□□□□ -2.04
RTCAO00442 MIR548F1-201ENST00000408667 84 ntBASIC2.33□□□□□ -2.04
RTCAO00442 TOMM20P4-201ENST00000427861 435 ntBASIC2.33□□□□□ -2.04
RTCAO00442 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.33□□□□□ -2.04
RTCAO00442 ERLEC1P1-201ENST00000433806 578 ntBASIC2.33□□□□□ -2.04
RTCAO00442 RPL21P99-201ENST00000480369 423 ntBASIC2.33□□□□□ -2.04
RTCAO00442 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.33□□□□□ -2.04
RTCAO00442 SNORA14.1-201ENST00000516113 141 ntBASIC2.33□□□□□ -2.04
RTCAO00442 SNORA43.2-201ENST00000516652 128 ntBASIC2.33□□□□□ -2.04
RTCAO00442 AC069113.1-201ENST00000517763 267 ntBASIC2.33□□□□□ -2.04
RTCAO00442 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.33□□□□□ -2.04
RTCAO00442 AC090136.1-201ENST00000520009 240 ntBASIC2.33□□□□□ -2.04
RTCAO00442 RPL7P20-201ENST00000520308 745 ntBASIC2.33□□□□□ -2.04
RTCAO00442 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.33□□□□□ -2.04
RTCAO00442 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.33□□□□□ -2.04
RTCAO00442 AC026271.5-201ENST00000577873 130 ntBASIC2.33□□□□□ -2.04
RTCAO00442 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.33□□□□□ -2.04
RTCAO00442 VN1R107P-201ENST00000601784 209 ntBASIC2.33□□□□□ -2.04
RTCAO00442 AC073410.2-201ENST00000603240 332 ntBASIC2.33□□□□□ -2.04
RTCAO00442 U4.3-201ENST00000621047 82 ntBASIC2.33□□□□□ -2.04
RTCAO00442 U4.7-201ENST00000638126 106 ntBASIC2.33□□□□□ -2.04
RTCAO00442 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.33□□□□□ -2.04
RTCAO00442 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.33□□□□□ -2.04
RTCAO00442 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
RTCAO00442 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.33□□□□□ -2.04
RTCAO00442 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.33□□□□□ -2.04
RTCAO00442 AL136360.1-201ENST00000503377 1900 ntBASIC2.32□□□□□ -2.04
RTCAO00442 AC027514.1-201ENST00000588561 1603 ntBASIC2.32□□□□□ -2.04
RTCAO00442 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
RTCAO00442 DEFA7P-201ENST00000382676 285 ntBASIC2.32□□□□□ -2.04
RTCAO00442 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
RTCAO00442 HMGN2P39-201ENST00000398005 273 ntBASIC2.32□□□□□ -2.04
RTCAO00442 RNU6-373P-201ENST00000411247 98 ntBASIC2.32□□□□□ -2.04
RTCAO00442 AC009963.1-201ENST00000417265 157 ntBASIC2.32□□□□□ -2.04
RTCAO00442 PGBD4P6-201ENST00000421501 610 ntBASIC2.32□□□□□ -2.04
RTCAO00442 HMGN2P26-201ENST00000463169 339 ntBASIC2.32□□□□□ -2.04
RTCAO00442 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.32□□□□□ -2.04
RTCAO00442 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.32□□□□□ -2.04
RTCAO00442 RNU6-1069P-201ENST00000516612 133 ntBASIC2.32□□□□□ -2.04
RTCAO00442 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
RTCAO00442 AC034114.1-201ENST00000520293 285 ntBASIC2.32□□□□□ -2.04
RTCAO00442 NDUFA5P6-201ENST00000542110 379 ntBASIC2.32□□□□□ -2.04
RTCAO00442 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.32□□□□□ -2.04
RTCAO00442 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.32□□□□□ -2.04
RTCAO00442 VN1R80P-201ENST00000597126 338 ntBASIC2.32□□□□□ -2.04
RTCAO00442 AL109918.3-201ENST00000603072 338 ntBASIC2.32□□□□□ -2.04
RTCAO00442 APOOP1-201ENST00000604695 592 ntBASIC2.32□□□□□ -2.04
RTCAO00442 AC002044.1-201ENST00000606707 158 ntBASIC2.32□□□□□ -2.04
RTCAO00442 AC104458.1-201ENST00000608243 463 ntBASIC2.32□□□□□ -2.04
RTCAO00442 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.32□□□□□ -2.04
RTCAO00442 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.32□□□□□ -2.04
RTCAO00442 RNU6-858P-201ENST00000362436 107 ntBASIC2.31□□□□□ -2.04
RTCAO00442 RNU6-78P-201ENST00000362897 107 ntBASIC2.31□□□□□ -2.04
RTCAO00442 SNORA25.6-201ENST00000364121 118 ntBASIC2.31□□□□□ -2.04
RTCAO00442 RNU4-66P-201ENST00000365199 138 ntBASIC2.31□□□□□ -2.04
RTCAO00442 Y_RNA.378-201ENST00000365652 113 ntBASIC2.31□□□□□ -2.04
RTCAO00442 AL512604.1-201ENST00000404812 257 ntBASIC2.31□□□□□ -2.04
RTCAO00442 U3.40-201ENST00000408706 208 ntBASIC2.31□□□□□ -2.04
RTCAO00442 RNU6ATAC25P-201ENST00000408798 117 ntBASIC2.31□□□□□ -2.04
RTCAO00442 SNORD56-201ENST00000413522 71 ntBASIC2.31□□□□□ -2.04
RTCAO00442 AC138623.1-201ENST00000418060 216 ntBASIC2.31□□□□□ -2.04
RTCAO00442 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.31□□□□□ -2.04
RTCAO00442 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.31□□□□□ -2.04
RTCAO00442 AL365400.1-201ENST00000431854 640 ntBASIC2.31□□□□□ -2.04
RTCAO00442 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.31□□□□□ -2.04
RTCAO00442 CR769767.1-201ENST00000436337 346 ntBASIC2.31□□□□□ -2.04
RTCAO00442 AL121601.2-201ENST00000438019 707 ntBASIC2.31□□□□□ -2.04
RTCAO00442 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC2.31□□□□□ -2.04
RTCAO00442 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms