Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.05□□□□□ -2.08
PDLIM1O00151 AC078899.2-201ENST00000595282 212 ntBASIC2.05□□□□□ -2.08
PDLIM1O00151 RPL30P11-203ENST00000598995 310 ntBASIC2.05□□□□□ -2.08
PDLIM1O00151 AL096840.1-201ENST00000603287 93 ntBASIC2.05□□□□□ -2.08
PDLIM1O00151 AC002044.1-201ENST00000606707 158 ntBASIC2.05□□□□□ -2.08
PDLIM1O00151 AP001596.2-201ENST00000608410 312 ntBASIC2.05□□□□□ -2.08
PDLIM1O00151 AC017083.3-201ENST00000609955 700 ntBASIC2.05□□□□□ -2.08
PDLIM1O00151 AC009233.1-201ENST00000616477 371 ntBASIC2.05□□□□□ -2.08
PDLIM1O00151 uc_338.34-201ENST00000617467 174 ntBASIC2.05□□□□□ -2.08
PDLIM1O00151 AC007792.1-201ENST00000623023 402 ntBASIC2.05□□□□□ -2.08
PDLIM1O00151 AC097372.5-201ENST00000623665 376 ntBASIC2.05□□□□□ -2.08
PDLIM1O00151 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.05□□□□□ -2.08
PDLIM1O00151 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
PDLIM1O00151 RNU6-212P-201ENST00000362642 104 ntBASIC2.04□□□□□ -2.08
PDLIM1O00151 RNU6-529P-201ENST00000363383 104 ntBASIC2.04□□□□□ -2.08
PDLIM1O00151 RNA5SP126-201ENST00000365092 109 ntBASIC2.04□□□□□ -2.08
PDLIM1O00151 RNA5SP240-201ENST00000365355 128 ntBASIC2.04□□□□□ -2.08
PDLIM1O00151 RNU6-622P-201ENST00000384272 103 ntBASIC2.04□□□□□ -2.08
PDLIM1O00151 Y_RNA.481-201ENST00000384373 102 ntBASIC2.04□□□□□ -2.08
PDLIM1O00151 RNU6-1245P-201ENST00000411130 106 ntBASIC2.04□□□□□ -2.08
PDLIM1O00151 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.04□□□□□ -2.08
PDLIM1O00151 DLGAP5P1-201ENST00000430307 464 ntBASIC2.04□□□□□ -2.08
PDLIM1O00151 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.04□□□□□ -2.08
PDLIM1O00151 AC016691.1-201ENST00000441321 413 ntBASIC2.04□□□□□ -2.08
PDLIM1O00151 AL161788.1-201ENST00000441805 169 ntBASIC2.04□□□□□ -2.08
PDLIM1O00151 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.04□□□□□ -2.08
PDLIM1O00151 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.04□□□□□ -2.08
PDLIM1O00151 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.04□□□□□ -2.08
PDLIM1O00151 RPL30P12-201ENST00000474666 353 ntBASIC2.04□□□□□ -2.08
PDLIM1O00151 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2.04□□□□□ -2.08
PDLIM1O00151 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.04□□□□□ -2.08
PDLIM1O00151 MTCYBP40-201ENST00000509390 1135 ntBASIC2.04□□□□□ -2.08
PDLIM1O00151 AP002770.2-201ENST00000543613 532 ntBASIC2.04□□□□□ -2.08
PDLIM1O00151 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.04□□□□□ -2.08
PDLIM1O00151 MIR3122-201ENST00000577243 73 ntBASIC2.04□□□□□ -2.08
PDLIM1O00151 MIR3126-201ENST00000577443 74 ntBASIC2.04□□□□□ -2.08
PDLIM1O00151 MIR5583-1-201ENST00000580941 59 ntBASIC2.04□□□□□ -2.08
PDLIM1O00151 AC090897.2-201ENST00000581715 130 ntBASIC2.04□□□□□ -2.08
PDLIM1O00151 AC103987.3-201ENST00000582071 292 ntBASIC2.04□□□□□ -2.08
PDLIM1O00151 U2.17-201ENST00000611454 95 ntBASIC2.04□□□□□ -2.08
PDLIM1O00151 AP003400.5-201ENST00000624827 617 ntBASIC2.04□□□□□ -2.08
PDLIM1O00151 U4.7-201ENST00000638126 106 ntBASIC2.04□□□□□ -2.08
PDLIM1O00151 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
PDLIM1O00151 RNU4-24P-201ENST00000364565 139 ntBASIC2.03□□□□□ -2.08
PDLIM1O00151 RNU6-1032P-201ENST00000384100 107 ntBASIC2.03□□□□□ -2.08
PDLIM1O00151 MTCO3P40-201ENST00000392516 676 ntBASIC2.03□□□□□ -2.08
PDLIM1O00151 RPL31P63-201ENST00000422565 375 ntBASIC2.03□□□□□ -2.08
PDLIM1O00151 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.03□□□□□ -2.08
PDLIM1O00151 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.03□□□□□ -2.08
PDLIM1O00151 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.03□□□□□ -2.08
PDLIM1O00151 RNU7-180P-201ENST00000459240 63 ntBASIC2.03□□□□□ -2.08
PDLIM1O00151 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC2.03□□□□□ -2.08
PDLIM1O00151 AC068781.1-201ENST00000488231 618 ntBASIC2.03□□□□□ -2.08
PDLIM1O00151 RPL9P6-201ENST00000492764 598 ntBASIC2.03□□□□□ -2.08
PDLIM1O00151 AC010486.1-201ENST00000511793 424 ntBASIC2.03□□□□□ -2.08
PDLIM1O00151 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.03□□□□□ -2.08
PDLIM1O00151 RNA5SP281-201ENST00000516504 135 ntBASIC2.03□□□□□ -2.08
PDLIM1O00151 RNU7-193P-201ENST00000516723 65 ntBASIC2.03□□□□□ -2.08
PDLIM1O00151 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
PDLIM1O00151 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.03□□□□□ -2.08
PDLIM1O00151 AC023050.3-201ENST00000541142 333 ntBASIC2.03□□□□□ -2.08
PDLIM1O00151 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.03□□□□□ -2.08
PDLIM1O00151 MIR4435-1-201ENST00000582552 80 ntBASIC2.03□□□□□ -2.08
PDLIM1O00151 MIR3941-201ENST00000582572 103 ntBASIC2.03□□□□□ -2.08
PDLIM1O00151 AC009831.4-201ENST00000620744 325 ntBASIC2.03□□□□□ -2.08
PDLIM1O00151 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC2.03□□□□□ -2.08
PDLIM1O00151 AC124864.2-201ENST00000624736 186 ntBASIC2.03□□□□□ -2.08
PDLIM1O00151 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.02□□□□□ -2.09
PDLIM1O00151 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
PDLIM1O00151 RNU1-72P-201ENST00000362976 153 ntBASIC2.02□□□□□ -2.09
PDLIM1O00151 RNU6-1085P-201ENST00000363576 107 ntBASIC2.02□□□□□ -2.09
PDLIM1O00151 RNU6-266P-201ENST00000364225 107 ntBASIC2.02□□□□□ -2.09
PDLIM1O00151 RNU6-1322P-201ENST00000364309 107 ntBASIC2.02□□□□□ -2.09
PDLIM1O00151 RNU4-75P-201ENST00000364621 146 ntBASIC2.02□□□□□ -2.09
PDLIM1O00151 Y_RNA.399-201ENST00000383955 105 ntBASIC2.02□□□□□ -2.09
PDLIM1O00151 Y_RNA.517-201ENST00000384551 106 ntBASIC2.02□□□□□ -2.09
PDLIM1O00151 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
PDLIM1O00151 AC008267.5-201ENST00000424928 265 ntBASIC2.02□□□□□ -2.09
PDLIM1O00151 AL121601.2-201ENST00000438019 707 ntBASIC2.02□□□□□ -2.09
PDLIM1O00151 RPL39P29-201ENST00000447779 157 ntBASIC2.02□□□□□ -2.09
PDLIM1O00151 RNU7-167P-201ENST00000459160 62 ntBASIC2.02□□□□□ -2.09
PDLIM1O00151 MTND2P33-201ENST00000506452 1031 ntBASIC2.02□□□□□ -2.09
PDLIM1O00151 AC008549.1-201ENST00000512900 643 ntBASIC2.02□□□□□ -2.09
PDLIM1O00151 RNA5SP401-201ENST00000515920 127 ntBASIC2.02□□□□□ -2.09
PDLIM1O00151 SNORA40.12-201ENST00000516329 111 ntBASIC2.02□□□□□ -2.09
PDLIM1O00151 AC069113.1-201ENST00000517763 267 ntBASIC2.02□□□□□ -2.09
PDLIM1O00151 AC109479.2-201ENST00000517842 174 ntBASIC2.02□□□□□ -2.09
PDLIM1O00151 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.02□□□□□ -2.09
PDLIM1O00151 AC104383.1-201ENST00000530297 370 ntBASIC2.02□□□□□ -2.09
PDLIM1O00151 AC091544.4-201ENST00000555268 342 ntBASIC2.02□□□□□ -2.09
PDLIM1O00151 AC245505.1-201ENST00000556398 224 ntBASIC2.02□□□□□ -2.09
PDLIM1O00151 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.02□□□□□ -2.09
PDLIM1O00151 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.02□□□□□ -2.09
PDLIM1O00151 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.02□□□□□ -2.09
PDLIM1O00151 AC007229.1-201ENST00000590455 412 ntBASIC2.02□□□□□ -2.09
PDLIM1O00151 AL670379.2-201ENST00000604983 252 ntBASIC2.02□□□□□ -2.09
PDLIM1O00151 AC123912.5-201ENST00000605470 343 ntBASIC2.02□□□□□ -2.09
PDLIM1O00151 AP001330.5-201ENST00000607176 411 ntBASIC2.02□□□□□ -2.09
PDLIM1O00151 AL627230.6-201ENST00000611129 280 ntBASIC2.02□□□□□ -2.09
PDLIM1O00151 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms