Protein–RNA interactions for Protein: K7ER74

APOC4-APOC2, APOC4-APOC2 readthrough (NMD candidate), humanhuman

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4-APOC2K7ER74 RAC1P6-201ENST00000423911 575 ntBASIC0.21□□□□□ -2.38
APOC4-APOC2K7ER74 MTND1P30-201ENST00000441241 901 ntBASIC0.21□□□□□ -2.38
APOC4-APOC2K7ER74 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC0.21□□□□□ -2.38
APOC4-APOC2K7ER74 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.21□□□□□ -2.38
APOC4-APOC2K7ER74 AC079140.3-201ENST00000511111 550 ntBASIC0.21□□□□□ -2.38
APOC4-APOC2K7ER74 RNA5SP255-201ENST00000516370 107 ntBASIC0.21□□□□□ -2.38
APOC4-APOC2K7ER74 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
APOC4-APOC2K7ER74 AP001189.2-201ENST00000527320 189 ntBASIC0.21□□□□□ -2.38
APOC4-APOC2K7ER74 AC023538.1-201ENST00000534576 736 ntBASIC0.21□□□□□ -2.38
APOC4-APOC2K7ER74 AC016957.1-201ENST00000534895 309 ntBASIC0.21□□□□□ -2.38
APOC4-APOC2K7ER74 MTCYBP33-201ENST00000575007 1130 ntBASIC0.21□□□□□ -2.38
APOC4-APOC2K7ER74 MIR5093-201ENST00000583199 100 ntBASIC0.21□□□□□ -2.38
APOC4-APOC2K7ER74 AC098483.2-201ENST00000603158 454 ntBASIC0.21□□□□□ -2.38
APOC4-APOC2K7ER74 AL078603.1-201ENST00000603824 313 ntBASIC0.21□□□□□ -2.38
APOC4-APOC2K7ER74 RNU6-87P-201ENST00000607561 108 ntBASIC0.21□□□□□ -2.38
APOC4-APOC2K7ER74 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC0.21□□□□□ -2.38
APOC4-APOC2K7ER74 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.21□□□□□ -2.38
APOC4-APOC2K7ER74 MIR6516-201ENST00000630554 81 ntBASIC0.21□□□□□ -2.38
APOC4-APOC2K7ER74 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.21□□□□□ -2.38
APOC4-APOC2K7ER74 RNU6-487P-201ENST00000365430 104 ntBASIC0.2□□□□□ -2.38
APOC4-APOC2K7ER74 RNU6-348P-201ENST00000384386 107 ntBASIC0.2□□□□□ -2.38
APOC4-APOC2K7ER74 RNU6-1176P-201ENST00000390955 107 ntBASIC0.2□□□□□ -2.38
APOC4-APOC2K7ER74 RNU1-119P-201ENST00000391122 165 ntBASIC0.2□□□□□ -2.38
APOC4-APOC2K7ER74 RNU6-952P-201ENST00000391164 108 ntBASIC0.2□□□□□ -2.38
APOC4-APOC2K7ER74 SNORA40C-201ENST00000391285 128 ntBASIC0.2□□□□□ -2.38
APOC4-APOC2K7ER74 RNU1-139P-201ENST00000391307 165 ntBASIC0.2□□□□□ -2.38
APOC4-APOC2K7ER74 AL357139.1-201ENST00000407792 426 ntBASIC0.2□□□□□ -2.38
APOC4-APOC2K7ER74 AC016831.2-201ENST00000417179 352 ntBASIC0.2□□□□□ -2.38
APOC4-APOC2K7ER74 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC0.2□□□□□ -2.38
APOC4-APOC2K7ER74 MTCO2P12-201ENST00000427426 682 ntBASIC0.2□□□□□ -2.38
APOC4-APOC2K7ER74 AL008629.1-201ENST00000438615 184 ntBASIC0.2□□□□□ -2.38
APOC4-APOC2K7ER74 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.2□□□□□ -2.38
APOC4-APOC2K7ER74 snoU13.27-201ENST00000459278 104 ntBASIC0.2□□□□□ -2.38
APOC4-APOC2K7ER74 AC048334.1-201ENST00000477975 159 ntBASIC0.2□□□□□ -2.38
APOC4-APOC2K7ER74 SNORA31.4-201ENST00000516049 129 ntBASIC0.2□□□□□ -2.38
APOC4-APOC2K7ER74 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.2□□□□□ -2.38
APOC4-APOC2K7ER74 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.2□□□□□ -2.38
APOC4-APOC2K7ER74 AL442163.3-201ENST00000554110 156 ntBASIC0.2□□□□□ -2.38
APOC4-APOC2K7ER74 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC0.2□□□□□ -2.38
APOC4-APOC2K7ER74 AC112191.3-201ENST00000604371 277 ntBASIC0.2□□□□□ -2.38
APOC4-APOC2K7ER74 AC069114.2-201ENST00000604699 304 ntBASIC0.2□□□□□ -2.38
APOC4-APOC2K7ER74 AP000654.2-201ENST00000605633 586 ntBASIC0.2□□□□□ -2.38
APOC4-APOC2K7ER74 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.2□□□□□ -2.38
APOC4-APOC2K7ER74 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC0.2□□□□□ -2.38
APOC4-APOC2K7ER74 AC243773.3-201ENST00000613270 256 ntBASIC0.2□□□□□ -2.38
APOC4-APOC2K7ER74 AC092656.1-203ENST00000624134 423 ntBASIC0.2□□□□□ -2.38
APOC4-APOC2K7ER74 AC120349.2-201ENST00000625002 298 ntBASIC0.2□□□□□ -2.38
APOC4-APOC2K7ER74 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.2□□□□□ -2.38
APOC4-APOC2K7ER74 AL589743.1-201ENST00000551932 2712 ntBASIC0.2□□□□□ -2.38
APOC4-APOC2K7ER74 RNA5SP259-201ENST00000365541 109 ntBASIC0.19□□□□□ -2.38
APOC4-APOC2K7ER74 RNU6-549P-201ENST00000384433 107 ntBASIC0.19□□□□□ -2.38
APOC4-APOC2K7ER74 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.19□□□□□ -2.38
APOC4-APOC2K7ER74 RAB28P5-201ENST00000427490 651 ntBASIC0.19□□□□□ -2.38
APOC4-APOC2K7ER74 MTND4LP14-201ENST00000429447 288 ntBASIC0.19□□□□□ -2.38
APOC4-APOC2K7ER74 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC0.19□□□□□ -2.38
APOC4-APOC2K7ER74 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.19□□□□□ -2.38
APOC4-APOC2K7ER74 AL606517.1-201ENST00000446914 387 ntBASIC0.19□□□□□ -2.38
APOC4-APOC2K7ER74 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.19□□□□□ -2.38
APOC4-APOC2K7ER74 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0.19□□□□□ -2.38
APOC4-APOC2K7ER74 RPF2P2-201ENST00000504693 896 ntBASIC0.19□□□□□ -2.38
APOC4-APOC2K7ER74 SNORD79.1-201ENST00000516069 84 ntBASIC0.19□□□□□ -2.38
APOC4-APOC2K7ER74 RNA5SP220-201ENST00000516298 104 ntBASIC0.19□□□□□ -2.38
APOC4-APOC2K7ER74 RNA5SP134-201ENST00000516492 96 ntBASIC0.19□□□□□ -2.38
APOC4-APOC2K7ER74 SUMO2P18-201ENST00000518873 252 ntBASIC0.19□□□□□ -2.38
APOC4-APOC2K7ER74 AP001893.2-201ENST00000526949 202 ntBASIC0.19□□□□□ -2.38
APOC4-APOC2K7ER74 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.19□□□□□ -2.38
APOC4-APOC2K7ER74 MTND4P14-201ENST00000435799 1354 ntBASIC0.19□□□□□ -2.38
APOC4-APOC2K7ER74 MTND4P21-201ENST00000453886 1357 ntBASIC0.19□□□□□ -2.38
APOC4-APOC2K7ER74 RNU6-212P-201ENST00000362642 104 ntBASIC0.18□□□□□ -2.38
APOC4-APOC2K7ER74 Y_RNA.354-201ENST00000365448 111 ntBASIC0.18□□□□□ -2.38
APOC4-APOC2K7ER74 RNU6-969P-201ENST00000383900 105 ntBASIC0.18□□□□□ -2.38
APOC4-APOC2K7ER74 RNU6-166P-201ENST00000384371 107 ntBASIC0.18□□□□□ -2.38
APOC4-APOC2K7ER74 MTCO1P56-201ENST00000401674 224 ntBASIC0.18□□□□□ -2.38
APOC4-APOC2K7ER74 AL359634.1-202ENST00000404721 284 ntBASIC0.18□□□□□ -2.38
APOC4-APOC2K7ER74 AL035398.1-201ENST00000430869 322 ntBASIC0.18□□□□□ -2.38
APOC4-APOC2K7ER74 MTCO3P18-201ENST00000440206 761 ntBASIC0.18□□□□□ -2.38
APOC4-APOC2K7ER74 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC0.18□□□□□ -2.38
APOC4-APOC2K7ER74 NEFMP1-201ENST00000443423 1006 ntBASIC0.18□□□□□ -2.38
APOC4-APOC2K7ER74 AC012308.1-201ENST00000451232 178 ntBASIC0.18□□□□□ -2.38
APOC4-APOC2K7ER74 RPS26P45-201ENST00000471748 340 ntBASIC0.18□□□□□ -2.38
APOC4-APOC2K7ER74 AC108729.2-201ENST00000476543 840 ntBASIC0.18□□□□□ -2.38
APOC4-APOC2K7ER74 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC0.18□□□□□ -2.38
APOC4-APOC2K7ER74 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.18□□□□□ -2.38
APOC4-APOC2K7ER74 MTCO3P7-201ENST00000510008 774 ntBASIC0.18□□□□□ -2.38
APOC4-APOC2K7ER74 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.18□□□□□ -2.38
APOC4-APOC2K7ER74 MIR3976-201ENST00000606807 139 ntBASIC0.18□□□□□ -2.38
APOC4-APOC2K7ER74 AC010975.3-201ENST00000618727 978 ntBASIC0.18□□□□□ -2.38
APOC4-APOC2K7ER74 AL356094.1-201ENST00000624663 1212 ntBASIC0.18□□□□□ -2.38
APOC4-APOC2K7ER74 RNU6-1019P-201ENST00000364424 107 ntBASIC0.17□□□□□ -2.38
APOC4-APOC2K7ER74 RNU6-932P-201ENST00000391108 106 ntBASIC0.17□□□□□ -2.38
APOC4-APOC2K7ER74 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.17□□□□□ -2.38
APOC4-APOC2K7ER74 AC123900.1-201ENST00000420390 96 ntBASIC0.17□□□□□ -2.38
APOC4-APOC2K7ER74 AL590623.1-201ENST00000427864 105 ntBASIC0.17□□□□□ -2.38
APOC4-APOC2K7ER74 AL121578.1-201ENST00000428051 892 ntBASIC0.17□□□□□ -2.38
APOC4-APOC2K7ER74 AC092423.1-201ENST00000430165 186 ntBASIC0.17□□□□□ -2.38
APOC4-APOC2K7ER74 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.17□□□□□ -2.38
APOC4-APOC2K7ER74 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.17□□□□□ -2.38
APOC4-APOC2K7ER74 FTH1P25-201ENST00000447665 469 ntBASIC0.17□□□□□ -2.38
APOC4-APOC2K7ER74 RNU7-136P-201ENST00000458819 69 ntBASIC0.17□□□□□ -2.38
APOC4-APOC2K7ER74 RPS26P48-201ENST00000491713 339 ntBASIC0.17□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 132.5 ms