Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC-0.06□□□□□ -2.42
CHKB-CPT1BH3BT56 RNU6-212P-201ENST00000362642 104 ntBASIC-0.06□□□□□ -2.42
CHKB-CPT1BH3BT56 Y_RNA.140-201ENST00000363474 103 ntBASIC-0.06□□□□□ -2.42
CHKB-CPT1BH3BT56 RNU6-16P-201ENST00000384385 107 ntBASIC-0.06□□□□□ -2.42
CHKB-CPT1BH3BT56 RNU6-163P-201ENST00000384396 106 ntBASIC-0.06□□□□□ -2.42
CHKB-CPT1BH3BT56 Y_RNA.500-201ENST00000384466 111 ntBASIC-0.06□□□□□ -2.42
CHKB-CPT1BH3BT56 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC-0.06□□□□□ -2.42
CHKB-CPT1BH3BT56 AC073910.1-201ENST00000445047 438 ntBASIC-0.06□□□□□ -2.42
CHKB-CPT1BH3BT56 AC012308.1-201ENST00000451232 178 ntBASIC-0.06□□□□□ -2.42
CHKB-CPT1BH3BT56 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC-0.06□□□□□ -2.42
CHKB-CPT1BH3BT56 MTND2P6-201ENST00000455337 1030 ntBASIC-0.06□□□□□ -2.42
CHKB-CPT1BH3BT56 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC-0.06□□□□□ -2.42
CHKB-CPT1BH3BT56 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC-0.06□□□□□ -2.42
CHKB-CPT1BH3BT56 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC-0.06□□□□□ -2.42
CHKB-CPT1BH3BT56 SUMO2P16-201ENST00000519475 264 ntBASIC-0.06□□□□□ -2.42
CHKB-CPT1BH3BT56 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC-0.06□□□□□ -2.42
CHKB-CPT1BH3BT56 ZKSCAN7P1-201ENST00000543668 673 ntBASIC-0.06□□□□□ -2.42
CHKB-CPT1BH3BT56 AC008015.1-201ENST00000555505 465 ntBASIC-0.06□□□□□ -2.42
CHKB-CPT1BH3BT56 AL159153.1-201ENST00000619688 317 ntBASIC-0.06□□□□□ -2.42
CHKB-CPT1BH3BT56 AL445264.1-201ENST00000621719 171 ntBASIC-0.06□□□□□ -2.42
CHKB-CPT1BH3BT56 Z69720.2-201ENST00000624755 279 ntBASIC-0.06□□□□□ -2.42
CHKB-CPT1BH3BT56 PCMTD1P7-201ENST00000634506 357 ntBASIC-0.06□□□□□ -2.42
CHKB-CPT1BH3BT56 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC-0.06□□□□□ -2.42
CHKB-CPT1BH3BT56 AC068700.1-201ENST00000565862 3754 ntBASIC-0.06□□□□□ -2.42
CHKB-CPT1BH3BT56 CASC19-280ENST00000642102 1351 ntBASIC-0.06□□□□□ -2.42
CHKB-CPT1BH3BT56 SNORD44.1-201ENST00000363202 61 ntBASIC-0.07□□□□□ -2.42
CHKB-CPT1BH3BT56 SNORD32B-201ENST00000364460 84 ntBASIC-0.07□□□□□ -2.42
CHKB-CPT1BH3BT56 SNORD51.1-201ENST00000365405 77 ntBASIC-0.07□□□□□ -2.42
CHKB-CPT1BH3BT56 RNU4-45P-201ENST00000365469 141 ntBASIC-0.07□□□□□ -2.42
CHKB-CPT1BH3BT56 RNU6-166P-201ENST00000384371 107 ntBASIC-0.07□□□□□ -2.42
CHKB-CPT1BH3BT56 RNU6-45P-201ENST00000384471 107 ntBASIC-0.07□□□□□ -2.42
CHKB-CPT1BH3BT56 SNORA16.2-201ENST00000390991 127 ntBASIC-0.07□□□□□ -2.42
CHKB-CPT1BH3BT56 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC-0.07□□□□□ -2.42
CHKB-CPT1BH3BT56 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC-0.07□□□□□ -2.42
CHKB-CPT1BH3BT56 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC-0.07□□□□□ -2.42
CHKB-CPT1BH3BT56 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC-0.07□□□□□ -2.42
CHKB-CPT1BH3BT56 RNU6-496P-201ENST00000516145 99 ntBASIC-0.07□□□□□ -2.42
CHKB-CPT1BH3BT56 AC011979.2-201ENST00000527568 352 ntBASIC-0.07□□□□□ -2.42
CHKB-CPT1BH3BT56 CR383656.8-201ENST00000549046 145 ntBASIC-0.07□□□□□ -2.42
CHKB-CPT1BH3BT56 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC-0.07□□□□□ -2.42
CHKB-CPT1BH3BT56 AC068620.3-201ENST00000602749 560 ntBASIC-0.07□□□□□ -2.42
CHKB-CPT1BH3BT56 AC253576.2-201ENST00000618815 580 ntBASIC-0.07□□□□□ -2.42
CHKB-CPT1BH3BT56 AL442644.1-201ENST00000454390 3105 ntBASIC-0.08□□□□□ -2.42
CHKB-CPT1BH3BT56 RNU1-96P-201ENST00000364163 162 ntBASIC-0.08□□□□□ -2.42
CHKB-CPT1BH3BT56 RNU6-1207P-201ENST00000384343 107 ntBASIC-0.08□□□□□ -2.42
CHKB-CPT1BH3BT56 ZNF736P10Y-201ENST00000403990 1110 ntBASIC-0.08□□□□□ -2.42
CHKB-CPT1BH3BT56 RNA5SP390-201ENST00000410191 113 ntBASIC-0.08□□□□□ -2.42
CHKB-CPT1BH3BT56 RPL21P24-201ENST00000413752 448 ntBASIC-0.08□□□□□ -2.42
CHKB-CPT1BH3BT56 MTCO1P21-201ENST00000416634 589 ntBASIC-0.08□□□□□ -2.42
CHKB-CPT1BH3BT56 AC016831.2-201ENST00000417179 352 ntBASIC-0.08□□□□□ -2.42
CHKB-CPT1BH3BT56 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC-0.08□□□□□ -2.42
CHKB-CPT1BH3BT56 AL591806.2-201ENST00000433122 173 ntBASIC-0.08□□□□□ -2.42
CHKB-CPT1BH3BT56 AL031313.1-201ENST00000448435 256 ntBASIC-0.08□□□□□ -2.42
CHKB-CPT1BH3BT56 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC-0.08□□□□□ -2.42
CHKB-CPT1BH3BT56 RNU7-90P-201ENST00000459216 62 ntBASIC-0.08□□□□□ -2.42
CHKB-CPT1BH3BT56 RNU7-140P-201ENST00000459546 60 ntBASIC-0.08□□□□□ -2.42
CHKB-CPT1BH3BT56 XACT-201ENST00000468762 497 ntTSL 5 BASIC-0.08□□□□□ -2.42
CHKB-CPT1BH3BT56 HESX1-202ENST00000473921 757 ntTSL 5 BASIC-0.08□□□□□ -2.42
CHKB-CPT1BH3BT56 AC092991.1-201ENST00000477176 376 ntBASIC-0.08□□□□□ -2.42
CHKB-CPT1BH3BT56 AC114981.1-201ENST00000503897 678 ntBASIC-0.08□□□□□ -2.42
CHKB-CPT1BH3BT56 RNU6-1261P-201ENST00000517194 104 ntBASIC-0.08□□□□□ -2.42
CHKB-CPT1BH3BT56 AC023538.1-201ENST00000534576 736 ntBASIC-0.08□□□□□ -2.42
CHKB-CPT1BH3BT56 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC-0.08□□□□□ -2.42
CHKB-CPT1BH3BT56 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC-0.08□□□□□ -2.42
CHKB-CPT1BH3BT56 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC-0.08□□□□□ -2.42
CHKB-CPT1BH3BT56 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC-0.08□□□□□ -2.42
CHKB-CPT1BH3BT56 MIR5695-201ENST00000579717 85 ntBASIC-0.08□□□□□ -2.42
CHKB-CPT1BH3BT56 AC025627.3-201ENST00000582078 182 ntBASIC-0.08□□□□□ -2.42
CHKB-CPT1BH3BT56 MIR4781-201ENST00000585250 76 ntBASIC-0.08□□□□□ -2.42
CHKB-CPT1BH3BT56 AL513534.2-201ENST00000603836 250 ntBASIC-0.08□□□□□ -2.42
CHKB-CPT1BH3BT56 MTND4P21-201ENST00000453886 1357 ntBASIC-0.08□□□□□ -2.42
CHKB-CPT1BH3BT56 Y_RNA.25-201ENST00000362528 102 ntBASIC-0.09□□□□□ -2.42
CHKB-CPT1BH3BT56 RNU6-392P-201ENST00000364926 101 ntBASIC-0.09□□□□□ -2.42
CHKB-CPT1BH3BT56 CALM2P3-201ENST00000400429 449 ntBASIC-0.09□□□□□ -2.42
CHKB-CPT1BH3BT56 AL359634.1-202ENST00000404721 284 ntBASIC-0.09□□□□□ -2.42
CHKB-CPT1BH3BT56 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC-0.09□□□□□ -2.42
CHKB-CPT1BH3BT56 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC-0.09□□□□□ -2.42
CHKB-CPT1BH3BT56 AC013262.1-201ENST00000426710 252 ntBASIC-0.09□□□□□ -2.42
CHKB-CPT1BH3BT56 AL592045.1-201ENST00000429867 352 ntBASIC-0.09□□□□□ -2.42
CHKB-CPT1BH3BT56 AC005094.1-201ENST00000440420 368 ntBASIC-0.09□□□□□ -2.42
CHKB-CPT1BH3BT56 NFU1P2-201ENST00000448700 469 ntBASIC-0.09□□□□□ -2.42
CHKB-CPT1BH3BT56 RPS20P10-201ENST00000451209 253 ntBASIC-0.09□□□□□ -2.42
CHKB-CPT1BH3BT56 GTF2IP12-201ENST00000456547 356 ntBASIC-0.09□□□□□ -2.42
CHKB-CPT1BH3BT56 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC-0.09□□□□□ -2.42
CHKB-CPT1BH3BT56 RNU7-34P-201ENST00000459394 64 ntBASIC-0.09□□□□□ -2.42
CHKB-CPT1BH3BT56 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC-0.09□□□□□ -2.42
CHKB-CPT1BH3BT56 AC108210.2-201ENST00000503681 201 ntBASIC-0.09□□□□□ -2.42
CHKB-CPT1BH3BT56 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC-0.09□□□□□ -2.42
CHKB-CPT1BH3BT56 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC-0.09□□□□□ -2.42
CHKB-CPT1BH3BT56 AC087854.1-201ENST00000519706 414 ntBASIC-0.09□□□□□ -2.42
CHKB-CPT1BH3BT56 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC-0.09□□□□□ -2.42
CHKB-CPT1BH3BT56 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC-0.09□□□□□ -2.42
CHKB-CPT1BH3BT56 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC-0.09□□□□□ -2.42
CHKB-CPT1BH3BT56 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC-0.09□□□□□ -2.42
CHKB-CPT1BH3BT56 AC012414.2-201ENST00000559474 187 ntBASIC-0.09□□□□□ -2.42
CHKB-CPT1BH3BT56 AC025678.1-201ENST00000567861 338 ntBASIC-0.09□□□□□ -2.42
CHKB-CPT1BH3BT56 MIR4742-201ENST00000581069 85 ntBASIC-0.09□□□□□ -2.42
CHKB-CPT1BH3BT56 Z98751.3-201ENST00000604447 521 ntBASIC-0.09□□□□□ -2.42
CHKB-CPT1BH3BT56 AC083806.3-201ENST00000614016 455 ntBASIC-0.09□□□□□ -2.42
CHKB-CPT1BH3BT56 AC116165.2-201ENST00000616705 206 ntBASIC-0.09□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms