Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 AC093019.1-201ENST00000443135 252 ntBASIC2.16□□□□□ -2.06
SRRM4A7MD48 AC013470.1-201ENST00000453438 462 ntBASIC2.16□□□□□ -2.06
SRRM4A7MD48 AC073901.1-201ENST00000462471 408 ntBASIC2.16□□□□□ -2.06
SRRM4A7MD48 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.16□□□□□ -2.06
SRRM4A7MD48 AC107953.1-201ENST00000522216 297 ntBASIC2.16□□□□□ -2.06
SRRM4A7MD48 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.16□□□□□ -2.06
SRRM4A7MD48 AC243972.3-201ENST00000539655 198 ntBASIC2.16□□□□□ -2.06
SRRM4A7MD48 AC004486.1-201ENST00000546846 233 ntBASIC2.16□□□□□ -2.06
SRRM4A7MD48 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.16□□□□□ -2.06
SRRM4A7MD48 AC078814.3-201ENST00000553036 491 ntBASIC2.16□□□□□ -2.06
SRRM4A7MD48 MIR5583-1-201ENST00000580941 59 ntBASIC2.16□□□□□ -2.06
SRRM4A7MD48 MIR3670-2-201ENST00000582974 65 ntBASIC2.16□□□□□ -2.06
SRRM4A7MD48 MIR3670-1-201ENST00000584160 65 ntBASIC2.16□□□□□ -2.06
SRRM4A7MD48 MIR3670-3-201ENST00000584855 65 ntBASIC2.16□□□□□ -2.06
SRRM4A7MD48 VN1R80P-201ENST00000597126 338 ntBASIC2.16□□□□□ -2.06
SRRM4A7MD48 AL670379.2-201ENST00000604983 252 ntBASIC2.16□□□□□ -2.06
SRRM4A7MD48 MIR3670-4-201ENST00000612260 65 ntBASIC2.16□□□□□ -2.06
SRRM4A7MD48 AC005858.4-201ENST00000623191 700 ntBASIC2.16□□□□□ -2.06
SRRM4A7MD48 AL359697.1-201ENST00000624879 587 ntBASIC2.16□□□□□ -2.06
SRRM4A7MD48 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.16□□□□□ -2.06
SRRM4A7MD48 AC112487.2-201ENST00000637950 304 ntBASIC2.16□□□□□ -2.06
SRRM4A7MD48 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.16□□□□□ -2.06
SRRM4A7MD48 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.16□□□□□ -2.06
SRRM4A7MD48 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.16□□□□□ -2.06
SRRM4A7MD48 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
SRRM4A7MD48 Y_RNA.142-201ENST00000363491 102 ntBASIC2.15□□□□□ -2.07
SRRM4A7MD48 RNU6-1210P-201ENST00000363775 107 ntBASIC2.15□□□□□ -2.07
SRRM4A7MD48 SNORA25.6-201ENST00000364121 118 ntBASIC2.15□□□□□ -2.07
SRRM4A7MD48 SNORD81.2-201ENST00000365153 76 ntBASIC2.15□□□□□ -2.07
SRRM4A7MD48 SNORA32.2-201ENST00000384049 122 ntBASIC2.15□□□□□ -2.07
SRRM4A7MD48 Y_RNA.529-201ENST00000384586 119 ntBASIC2.15□□□□□ -2.07
SRRM4A7MD48 MIR483-201ENST00000385070 76 ntBASIC2.15□□□□□ -2.07
SRRM4A7MD48 MT-TD-201ENST00000387419 68 ntBASIC2.15□□□□□ -2.07
SRRM4A7MD48 AC009161.1-201ENST00000417306 376 ntBASIC2.15□□□□□ -2.07
SRRM4A7MD48 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.15□□□□□ -2.07
SRRM4A7MD48 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.15□□□□□ -2.07
SRRM4A7MD48 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.15□□□□□ -2.07
SRRM4A7MD48 AC236972.1-201ENST00000433225 199 ntBASIC2.15□□□□□ -2.07
SRRM4A7MD48 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.15□□□□□ -2.07
SRRM4A7MD48 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.15□□□□□ -2.07
SRRM4A7MD48 RNU7-26P-201ENST00000458980 63 ntBASIC2.15□□□□□ -2.07
SRRM4A7MD48 RNU6-1208P-201ENST00000459588 107 ntBASIC2.15□□□□□ -2.07
SRRM4A7MD48 AC008571.1-201ENST00000467232 300 ntBASIC2.15□□□□□ -2.07
SRRM4A7MD48 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.15□□□□□ -2.07
SRRM4A7MD48 CCDC34P1-201ENST00000507441 517 ntBASIC2.15□□□□□ -2.07
SRRM4A7MD48 RNU2-53P-201ENST00000516257 147 ntBASIC2.15□□□□□ -2.07
SRRM4A7MD48 RNU6-1314P-201ENST00000517139 104 ntBASIC2.15□□□□□ -2.07
SRRM4A7MD48 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.15□□□□□ -2.07
SRRM4A7MD48 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.15□□□□□ -2.07
SRRM4A7MD48 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
SRRM4A7MD48 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.15□□□□□ -2.07
SRRM4A7MD48 AL118558.2-201ENST00000556294 238 ntBASIC2.15□□□□□ -2.07
SRRM4A7MD48 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.15□□□□□ -2.07
SRRM4A7MD48 AC092747.3-201ENST00000603769 301 ntBASIC2.15□□□□□ -2.07
SRRM4A7MD48 AL138963.2-201ENST00000605137 226 ntBASIC2.15□□□□□ -2.07
SRRM4A7MD48 RNU6-85P-201ENST00000605989 107 ntBASIC2.15□□□□□ -2.07
SRRM4A7MD48 AC009248.2-201ENST00000619826 254 ntBASIC2.15□□□□□ -2.07
SRRM4A7MD48 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.15□□□□□ -2.07
SRRM4A7MD48 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.15□□□□□ -2.07
SRRM4A7MD48 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.14□□□□□ -2.07
SRRM4A7MD48 MAPK10-266ENST00000641066 6555 ntBASIC2.14□□□□□ -2.07
SRRM4A7MD48 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.14□□□□□ -2.07
SRRM4A7MD48 VTRNA1-1-201ENST00000363120 99 ntBASIC2.14□□□□□ -2.07
SRRM4A7MD48 RNU6-522P-201ENST00000364497 107 ntBASIC2.14□□□□□ -2.07
SRRM4A7MD48 Y_RNA.356-201ENST00000365475 113 ntBASIC2.14□□□□□ -2.07
SRRM4A7MD48 MIR491-201ENST00000384877 84 ntBASIC2.14□□□□□ -2.07
SRRM4A7MD48 MIR128-1-201ENST00000384921 82 ntBASIC2.14□□□□□ -2.07
SRRM4A7MD48 SNORA48.2-201ENST00000390926 124 ntBASIC2.14□□□□□ -2.07
SRRM4A7MD48 RPS29P13-201ENST00000402041 169 ntBASIC2.14□□□□□ -2.07
SRRM4A7MD48 CBX3P9-201ENST00000402326 552 ntBASIC2.14□□□□□ -2.07
SRRM4A7MD48 AL356057.3-201ENST00000402607 340 ntBASIC2.14□□□□□ -2.07
SRRM4A7MD48 AL356432.1-201ENST00000405809 419 ntBASIC2.14□□□□□ -2.07
SRRM4A7MD48 RNU4-26P-201ENST00000410270 107 ntBASIC2.14□□□□□ -2.07
SRRM4A7MD48 RNA5SP21-201ENST00000410917 96 ntBASIC2.14□□□□□ -2.07
SRRM4A7MD48 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.14□□□□□ -2.07
SRRM4A7MD48 NUP35P1-201ENST00000422734 947 ntBASIC2.14□□□□□ -2.07
SRRM4A7MD48 SUMO1P4-201ENST00000429430 302 ntBASIC2.14□□□□□ -2.07
SRRM4A7MD48 AL161788.1-201ENST00000441805 169 ntBASIC2.14□□□□□ -2.07
SRRM4A7MD48 AC007969.2-201ENST00000441891 191 ntBASIC2.14□□□□□ -2.07
SRRM4A7MD48 RPL39P29-201ENST00000447779 157 ntBASIC2.14□□□□□ -2.07
SRRM4A7MD48 AL031274.1-201ENST00000450334 232 ntBASIC2.14□□□□□ -2.07
SRRM4A7MD48 AP000705.1-201ENST00000454567 350 ntBASIC2.14□□□□□ -2.07
SRRM4A7MD48 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.14□□□□□ -2.07
SRRM4A7MD48 Y_RNA.665-201ENST00000516177 98 ntBASIC2.14□□□□□ -2.07
SRRM4A7MD48 RNU6-1038P-201ENST00000516516 104 ntBASIC2.14□□□□□ -2.07
SRRM4A7MD48 SNORA70.24-201ENST00000517233 118 ntBASIC2.14□□□□□ -2.07
SRRM4A7MD48 AC087241.2-201ENST00000535801 324 ntBASIC2.14□□□□□ -2.07
SRRM4A7MD48 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.14□□□□□ -2.07
SRRM4A7MD48 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.14□□□□□ -2.07
SRRM4A7MD48 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.14□□□□□ -2.07
SRRM4A7MD48 MIR4635-201ENST00000583759 79 ntBASIC2.14□□□□□ -2.07
SRRM4A7MD48 RPL30P11-203ENST00000598995 310 ntBASIC2.14□□□□□ -2.07
SRRM4A7MD48 AC009314.1-201ENST00000603871 304 ntBASIC2.14□□□□□ -2.07
SRRM4A7MD48 AL161756.2-201ENST00000604597 246 ntBASIC2.14□□□□□ -2.07
SRRM4A7MD48 AC093913.1-201ENST00000614178 329 ntBASIC2.14□□□□□ -2.07
SRRM4A7MD48 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
SRRM4A7MD48 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.13□□□□□ -2.07
SRRM4A7MD48 AP000560.1-201ENST00000624150 1937 ntBASIC2.13□□□□□ -2.07
SRRM4A7MD48 Y_RNA.11-201ENST00000362375 109 ntBASIC2.13□□□□□ -2.07
SRRM4A7MD48 RNU4-73P-201ENST00000363164 141 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms