Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 SUMO2P18-201ENST00000518873 252 ntBASIC0.15□□□□□ -2.39
TRAV1-2A0A0B4J238 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.15□□□□□ -2.39
TRAV1-2A0A0B4J238 SNRPGP1-201ENST00000553864 222 ntBASIC0.15□□□□□ -2.39
TRAV1-2A0A0B4J238 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.15□□□□□ -2.39
TRAV1-2A0A0B4J238 MIR3976-201ENST00000606807 139 ntBASIC0.15□□□□□ -2.39
TRAV1-2A0A0B4J238 AC243773.3-201ENST00000613270 256 ntBASIC0.15□□□□□ -2.39
TRAV1-2A0A0B4J238 RNA5SP259-201ENST00000365541 109 ntBASIC0.14□□□□□ -2.39
TRAV1-2A0A0B4J238 VTRNA1-3-201ENST00000365645 89 ntBASIC0.14□□□□□ -2.39
TRAV1-2A0A0B4J238 RNU1-119P-201ENST00000391122 165 ntBASIC0.14□□□□□ -2.39
TRAV1-2A0A0B4J238 RNA5SP390-201ENST00000410191 113 ntBASIC0.14□□□□□ -2.39
TRAV1-2A0A0B4J238 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC0.14□□□□□ -2.39
TRAV1-2A0A0B4J238 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.14□□□□□ -2.39
TRAV1-2A0A0B4J238 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.14□□□□□ -2.39
TRAV1-2A0A0B4J238 AL591212.2-201ENST00000433923 257 ntBASIC0.14□□□□□ -2.39
TRAV1-2A0A0B4J238 LARP1BP3-201ENST00000437229 869 ntBASIC0.14□□□□□ -2.39
TRAV1-2A0A0B4J238 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.14□□□□□ -2.39
TRAV1-2A0A0B4J238 GAPDHP17-201ENST00000449858 1001 ntBASIC0.14□□□□□ -2.39
TRAV1-2A0A0B4J238 RNU7-136P-201ENST00000458819 69 ntBASIC0.14□□□□□ -2.39
TRAV1-2A0A0B4J238 RPL39P36-201ENST00000490784 156 ntBASIC0.14□□□□□ -2.39
TRAV1-2A0A0B4J238 RPS26P48-201ENST00000491713 339 ntBASIC0.14□□□□□ -2.39
TRAV1-2A0A0B4J238 AC113410.1-201ENST00000505029 247 ntBASIC0.14□□□□□ -2.39
TRAV1-2A0A0B4J238 AC067942.3-201ENST00000512025 362 ntBASIC0.14□□□□□ -2.39
TRAV1-2A0A0B4J238 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.14□□□□□ -2.39
TRAV1-2A0A0B4J238 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC0.14□□□□□ -2.39
TRAV1-2A0A0B4J238 MTCYBP33-201ENST00000575007 1130 ntBASIC0.14□□□□□ -2.39
TRAV1-2A0A0B4J238 AC068790.6-201ENST00000602558 258 ntBASIC0.14□□□□□ -2.39
TRAV1-2A0A0B4J238 AL391001.1-201ENST00000602747 715 ntBASIC0.14□□□□□ -2.39
TRAV1-2A0A0B4J238 AC021506.2-201ENST00000612354 169 ntBASIC0.14□□□□□ -2.39
TRAV1-2A0A0B4J238 AL158163.2-201ENST00000619110 700 ntBASIC0.14□□□□□ -2.39
TRAV1-2A0A0B4J238 AC009509.4-201ENST00000619202 509 ntBASIC0.14□□□□□ -2.39
TRAV1-2A0A0B4J238 AC243829.3-201ENST00000622177 108 ntBASIC0.14□□□□□ -2.39
TRAV1-2A0A0B4J238 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.14□□□□□ -2.39
TRAV1-2A0A0B4J238 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.13□□□□□ -2.39
TRAV1-2A0A0B4J238 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.13□□□□□ -2.39
TRAV1-2A0A0B4J238 AC245047.7-201ENST00000440265 293 ntBASIC0.13□□□□□ -2.39
TRAV1-2A0A0B4J238 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC0.13□□□□□ -2.39
TRAV1-2A0A0B4J238 MTND2P20-201ENST00000440805 661 ntBASIC0.13□□□□□ -2.39
TRAV1-2A0A0B4J238 MRPL42P4-201ENST00000453267 443 ntBASIC0.13□□□□□ -2.39
TRAV1-2A0A0B4J238 MTND1P3-201ENST00000484956 952 ntBASIC0.13□□□□□ -2.39
TRAV1-2A0A0B4J238 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC0.13□□□□□ -2.39
TRAV1-2A0A0B4J238 RNU6-496P-201ENST00000516145 99 ntBASIC0.13□□□□□ -2.39
TRAV1-2A0A0B4J238 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.13□□□□□ -2.39
TRAV1-2A0A0B4J238 AP001893.2-201ENST00000526949 202 ntBASIC0.13□□□□□ -2.39
TRAV1-2A0A0B4J238 AP002906.1-201ENST00000603405 233 ntBASIC0.13□□□□□ -2.39
TRAV1-2A0A0B4J238 BNIP3P9-201ENST00000603714 553 ntBASIC0.13□□□□□ -2.39
TRAV1-2A0A0B4J238 AC126177.8-201ENST00000618339 1015 ntBASIC0.13□□□□□ -2.39
TRAV1-2A0A0B4J238 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.13□□□□□ -2.39
TRAV1-2A0A0B4J238 MIR6516-201ENST00000630554 81 ntBASIC0.13□□□□□ -2.39
TRAV1-2A0A0B4J238 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.13□□□□□ -2.39
TRAV1-2A0A0B4J238 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.12□□□□□ -2.39
TRAV1-2A0A0B4J238 RNU6-862P-201ENST00000362804 105 ntBASIC0.12□□□□□ -2.39
TRAV1-2A0A0B4J238 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.12□□□□□ -2.39
TRAV1-2A0A0B4J238 AC011233.1-201ENST00000422812 283 ntBASIC0.12□□□□□ -2.39
TRAV1-2A0A0B4J238 FO393414.1-201ENST00000428697 1184 ntBASIC0.12□□□□□ -2.39
TRAV1-2A0A0B4J238 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC0.12□□□□□ -2.39
TRAV1-2A0A0B4J238 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.12□□□□□ -2.39
TRAV1-2A0A0B4J238 RPS26P45-201ENST00000471748 340 ntBASIC0.12□□□□□ -2.39
TRAV1-2A0A0B4J238 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.12□□□□□ -2.39
TRAV1-2A0A0B4J238 AC010587.2-201ENST00000511727 448 ntBASIC0.12□□□□□ -2.39
TRAV1-2A0A0B4J238 RNU6-1053P-201ENST00000515930 101 ntBASIC0.12□□□□□ -2.39
TRAV1-2A0A0B4J238 RN7SKP12-201ENST00000516275 143 ntBASIC0.12□□□□□ -2.39
TRAV1-2A0A0B4J238 RNU6-143P-201ENST00000516942 93 ntBASIC0.12□□□□□ -2.39
TRAV1-2A0A0B4J238 AC023632.1-201ENST00000518463 375 ntBASIC0.12□□□□□ -2.39
TRAV1-2A0A0B4J238 APOOP3-201ENST00000536787 586 ntBASIC0.12□□□□□ -2.39
TRAV1-2A0A0B4J238 OR6C7P-201ENST00000547875 934 ntBASIC0.12□□□□□ -2.39
TRAV1-2A0A0B4J238 BNIP3P6-201ENST00000549284 499 ntBASIC0.12□□□□□ -2.39
TRAV1-2A0A0B4J238 AL133153.1-201ENST00000557756 303 ntBASIC0.12□□□□□ -2.39
TRAV1-2A0A0B4J238 BNIP3P8-201ENST00000597863 560 ntBASIC0.12□□□□□ -2.39
TRAV1-2A0A0B4J238 AC098483.2-201ENST00000603158 454 ntBASIC0.12□□□□□ -2.39
TRAV1-2A0A0B4J238 AL358072.1-201ENST00000604156 575 ntBASIC0.12□□□□□ -2.39
TRAV1-2A0A0B4J238 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
TRAV1-2A0A0B4J238 AC005332.6-201ENST00000613178 446 ntBASIC0.12□□□□□ -2.39
TRAV1-2A0A0B4J238 MIR6715A-201ENST00000615929 79 ntBASIC0.12□□□□□ -2.39
TRAV1-2A0A0B4J238 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
TRAV1-2A0A0B4J238 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC0.12□□□□□ -2.39
TRAV1-2A0A0B4J238 SNORD32B-201ENST00000364460 84 ntBASIC0.11□□□□□ -2.39
TRAV1-2A0A0B4J238 Y_RNA.338-201ENST00000365320 114 ntBASIC0.11□□□□□ -2.39
TRAV1-2A0A0B4J238 RNU6-481P-201ENST00000384194 107 ntBASIC0.11□□□□□ -2.39
TRAV1-2A0A0B4J238 RNU6-1237P-201ENST00000384777 107 ntBASIC0.11□□□□□ -2.39
TRAV1-2A0A0B4J238 MIR1295A-201ENST00000408463 79 ntBASIC0.11□□□□□ -2.39
TRAV1-2A0A0B4J238 RNA5SP111-201ENST00000411386 101 ntBASIC0.11□□□□□ -2.39
TRAV1-2A0A0B4J238 AC092423.1-201ENST00000430165 186 ntBASIC0.11□□□□□ -2.39
TRAV1-2A0A0B4J238 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC0.11□□□□□ -2.39
TRAV1-2A0A0B4J238 USP9YP14-201ENST00000430663 563 ntBASIC0.11□□□□□ -2.39
TRAV1-2A0A0B4J238 MTCO3P29-201ENST00000432119 779 ntBASIC0.11□□□□□ -2.39
TRAV1-2A0A0B4J238 AC073910.1-201ENST00000445047 438 ntBASIC0.11□□□□□ -2.39
TRAV1-2A0A0B4J238 GXYLT1P1-201ENST00000446657 490 ntBASIC0.11□□□□□ -2.39
TRAV1-2A0A0B4J238 RPS29P1-201ENST00000465274 159 ntBASIC0.11□□□□□ -2.39
TRAV1-2A0A0B4J238 AC108729.2-201ENST00000476543 840 ntBASIC0.11□□□□□ -2.39
TRAV1-2A0A0B4J238 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC0.11□□□□□ -2.39
TRAV1-2A0A0B4J238 AC091435.1-201ENST00000505442 584 ntBASIC0.11□□□□□ -2.39
TRAV1-2A0A0B4J238 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.11□□□□□ -2.39
TRAV1-2A0A0B4J238 SNORA76.2-201ENST00000517095 137 ntBASIC0.11□□□□□ -2.39
TRAV1-2A0A0B4J238 AC087854.1-201ENST00000519706 414 ntBASIC0.11□□□□□ -2.39
TRAV1-2A0A0B4J238 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC0.11□□□□□ -2.39
TRAV1-2A0A0B4J238 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC0.11□□□□□ -2.39
TRAV1-2A0A0B4J238 AC017083.3-201ENST00000609955 700 ntBASIC0.11□□□□□ -2.39
TRAV1-2A0A0B4J238 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.11□□□□□ -2.39
TRAV1-2A0A0B4J238 AL138726.1-201ENST00000614873 333 ntBASIC0.11□□□□□ -2.39
TRAV1-2A0A0B4J238 AC107982.1-201ENST00000507171 1300 ntBASIC0.11□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms