Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 RNU6-61P-201ENST00000365528 109 ntBASIC1.5□□□□□ -2.17
COMMD3-BMI1R4GMX3 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.5□□□□□ -2.17
COMMD3-BMI1R4GMX3 RNU6-641P-201ENST00000384006 107 ntBASIC1.5□□□□□ -2.17
COMMD3-BMI1R4GMX3 RNU6-39P-201ENST00000384344 107 ntBASIC1.5□□□□□ -2.17
COMMD3-BMI1R4GMX3 MIR583-201ENST00000384846 75 ntBASIC1.5□□□□□ -2.17
COMMD3-BMI1R4GMX3 BTF3L4P1-201ENST00000413813 468 ntBASIC1.5□□□□□ -2.17
COMMD3-BMI1R4GMX3 AC114491.1-201ENST00000416095 246 ntBASIC1.5□□□□□ -2.17
COMMD3-BMI1R4GMX3 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.5□□□□□ -2.17
COMMD3-BMI1R4GMX3 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.5□□□□□ -2.17
COMMD3-BMI1R4GMX3 MTCO3P46-201ENST00000425787 232 ntBASIC1.5□□□□□ -2.17
COMMD3-BMI1R4GMX3 AL356583.2-201ENST00000426536 280 ntBASIC1.5□□□□□ -2.17
COMMD3-BMI1R4GMX3 AC079781.2-201ENST00000446424 169 ntBASIC1.5□□□□□ -2.17
COMMD3-BMI1R4GMX3 RPL23AP63-201ENST00000498752 471 ntBASIC1.5□□□□□ -2.17
COMMD3-BMI1R4GMX3 AC108210.2-201ENST00000503681 201 ntBASIC1.5□□□□□ -2.17
COMMD3-BMI1R4GMX3 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.5□□□□□ -2.17
COMMD3-BMI1R4GMX3 RNU6-965P-201ENST00000516721 96 ntBASIC1.5□□□□□ -2.17
COMMD3-BMI1R4GMX3 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.5□□□□□ -2.17
COMMD3-BMI1R4GMX3 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.5□□□□□ -2.17
COMMD3-BMI1R4GMX3 MIR4422-201ENST00000581938 83 ntBASIC1.5□□□□□ -2.17
COMMD3-BMI1R4GMX3 AC090616.2-202ENST00000584248 222 ntBASIC1.5□□□□□ -2.17
COMMD3-BMI1R4GMX3 AC008521.1-201ENST00000587471 187 ntBASIC1.5□□□□□ -2.17
COMMD3-BMI1R4GMX3 HMGN1P30-201ENST00000589286 268 ntBASIC1.5□□□□□ -2.17
COMMD3-BMI1R4GMX3 AL136363.2-201ENST00000604173 851 ntBASIC1.5□□□□□ -2.17
COMMD3-BMI1R4GMX3 AC009318.2-201ENST00000610917 651 ntBASIC1.5□□□□□ -2.17
COMMD3-BMI1R4GMX3 AL391262.2-201ENST00000622466 494 ntBASIC1.5□□□□□ -2.17
COMMD3-BMI1R4GMX3 AC084768.2-201ENST00000622736 221 ntBASIC1.5□□□□□ -2.17
COMMD3-BMI1R4GMX3 AC099654.13-201ENST00000639774 207 ntBASIC1.5□□□□□ -2.17
COMMD3-BMI1R4GMX3 AP000648.3-201ENST00000623539 4507 ntBASIC1.5□□□□□ -2.17
COMMD3-BMI1R4GMX3 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
COMMD3-BMI1R4GMX3 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.49□□□□□ -2.17
COMMD3-BMI1R4GMX3 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
COMMD3-BMI1R4GMX3 RNU6-944P-201ENST00000364023 107 ntBASIC1.49□□□□□ -2.17
COMMD3-BMI1R4GMX3 SNORA20.2-201ENST00000383922 131 ntBASIC1.49□□□□□ -2.17
COMMD3-BMI1R4GMX3 MIR578-201ENST00000384828 96 ntBASIC1.49□□□□□ -2.17
COMMD3-BMI1R4GMX3 MIR1289-2-201ENST00000408360 111 ntBASIC1.49□□□□□ -2.17
COMMD3-BMI1R4GMX3 RNA5SP100-201ENST00000410903 110 ntBASIC1.49□□□□□ -2.17
COMMD3-BMI1R4GMX3 RNA5SP59-201ENST00000410922 110 ntBASIC1.49□□□□□ -2.17
COMMD3-BMI1R4GMX3 AL031779.1-201ENST00000415663 330 ntBASIC1.49□□□□□ -2.17
COMMD3-BMI1R4GMX3 AL593851.1-201ENST00000426171 157 ntBASIC1.49□□□□□ -2.17
COMMD3-BMI1R4GMX3 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.49□□□□□ -2.17
COMMD3-BMI1R4GMX3 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.49□□□□□ -2.17
COMMD3-BMI1R4GMX3 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC1.49□□□□□ -2.17
COMMD3-BMI1R4GMX3 RPL7P54-201ENST00000438336 674 ntBASIC1.49□□□□□ -2.17
COMMD3-BMI1R4GMX3 TAF9P1-201ENST00000445421 515 ntBASIC1.49□□□□□ -2.17
COMMD3-BMI1R4GMX3 HSPE1P24-201ENST00000450782 238 ntBASIC1.49□□□□□ -2.17
COMMD3-BMI1R4GMX3 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.49□□□□□ -2.17
COMMD3-BMI1R4GMX3 TAF9P2-201ENST00000454958 515 ntBASIC1.49□□□□□ -2.17
COMMD3-BMI1R4GMX3 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.49□□□□□ -2.17
COMMD3-BMI1R4GMX3 AC079140.5-201ENST00000507882 310 ntBASIC1.49□□□□□ -2.17
COMMD3-BMI1R4GMX3 RNU6-1129P-201ENST00000515964 104 ntBASIC1.49□□□□□ -2.17
COMMD3-BMI1R4GMX3 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.49□□□□□ -2.17
COMMD3-BMI1R4GMX3 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.49□□□□□ -2.17
COMMD3-BMI1R4GMX3 AC022616.3-201ENST00000523940 148 ntBASIC1.49□□□□□ -2.17
COMMD3-BMI1R4GMX3 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.49□□□□□ -2.17
COMMD3-BMI1R4GMX3 AL160236.1-201ENST00000556317 195 ntBASIC1.49□□□□□ -2.17
COMMD3-BMI1R4GMX3 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.49□□□□□ -2.17
COMMD3-BMI1R4GMX3 AC092354.1-201ENST00000606057 376 ntBASIC1.49□□□□□ -2.17
COMMD3-BMI1R4GMX3 AC091304.9-201ENST00000612091 226 ntBASIC1.49□□□□□ -2.17
COMMD3-BMI1R4GMX3 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.49□□□□□ -2.17
COMMD3-BMI1R4GMX3 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC1.49□□□□□ -2.17
COMMD3-BMI1R4GMX3 uc_338.11-201ENST00000619132 160 ntBASIC1.49□□□□□ -2.17
COMMD3-BMI1R4GMX3 AC026585.1-201ENST00000619582 524 ntBASIC1.49□□□□□ -2.17
COMMD3-BMI1R4GMX3 AL159153.1-201ENST00000619688 317 ntBASIC1.49□□□□□ -2.17
COMMD3-BMI1R4GMX3 AC091304.6-201ENST00000619761 202 ntBASIC1.49□□□□□ -2.17
COMMD3-BMI1R4GMX3 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.49□□□□□ -2.17
COMMD3-BMI1R4GMX3 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.49□□□□□ -2.17
COMMD3-BMI1R4GMX3 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
COMMD3-BMI1R4GMX3 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.49□□□□□ -2.17
COMMD3-BMI1R4GMX3 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
COMMD3-BMI1R4GMX3 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.48□□□□□ -2.17
COMMD3-BMI1R4GMX3 RNU6-743P-201ENST00000364151 106 ntBASIC1.48□□□□□ -2.17
COMMD3-BMI1R4GMX3 RNU6-384P-201ENST00000364900 104 ntBASIC1.48□□□□□ -2.17
COMMD3-BMI1R4GMX3 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
COMMD3-BMI1R4GMX3 EEF1A1P40-201ENST00000412883 573 ntBASIC1.48□□□□□ -2.17
COMMD3-BMI1R4GMX3 NCOR1P3-201ENST00000420479 303 ntBASIC1.48□□□□□ -2.17
COMMD3-BMI1R4GMX3 CBX3P6-201ENST00000430257 527 ntBASIC1.48□□□□□ -2.17
COMMD3-BMI1R4GMX3 AL591806.2-201ENST00000433122 173 ntBASIC1.48□□□□□ -2.17
COMMD3-BMI1R4GMX3 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC1.48□□□□□ -2.17
COMMD3-BMI1R4GMX3 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.48□□□□□ -2.17
COMMD3-BMI1R4GMX3 UBE2D3P4-201ENST00000441973 436 ntBASIC1.48□□□□□ -2.17
COMMD3-BMI1R4GMX3 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.48□□□□□ -2.17
COMMD3-BMI1R4GMX3 RPS29P23-201ENST00000458635 123 ntBASIC1.48□□□□□ -2.17
COMMD3-BMI1R4GMX3 AC116562.3-201ENST00000506136 177 ntBASIC1.48□□□□□ -2.17
COMMD3-BMI1R4GMX3 AC104136.1-201ENST00000512969 394 ntBASIC1.48□□□□□ -2.17
COMMD3-BMI1R4GMX3 Vault.3-201ENST00000516676 95 ntBASIC1.48□□□□□ -2.17
COMMD3-BMI1R4GMX3 RNU6-548P-201ENST00000517083 115 ntBASIC1.48□□□□□ -2.17
COMMD3-BMI1R4GMX3 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.48□□□□□ -2.17
COMMD3-BMI1R4GMX3 AC106038.2-201ENST00000520706 568 ntBASIC1.48□□□□□ -2.17
COMMD3-BMI1R4GMX3 AP001372.4-201ENST00000524889 472 ntBASIC1.48□□□□□ -2.17
COMMD3-BMI1R4GMX3 AC068587.5-201ENST00000528506 175 ntBASIC1.48□□□□□ -2.17
COMMD3-BMI1R4GMX3 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
COMMD3-BMI1R4GMX3 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
COMMD3-BMI1R4GMX3 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.48□□□□□ -2.17
COMMD3-BMI1R4GMX3 AC009094.1-201ENST00000564443 426 ntBASIC1.48□□□□□ -2.17
COMMD3-BMI1R4GMX3 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.48□□□□□ -2.17
COMMD3-BMI1R4GMX3 AL022161.1-201ENST00000604390 213 ntBASIC1.48□□□□□ -2.17
COMMD3-BMI1R4GMX3 CLPTM1LP1-201ENST00000604519 484 ntBASIC1.48□□□□□ -2.17
COMMD3-BMI1R4GMX3 RMST_7.1-201ENST00000621935 268 ntBASIC1.48□□□□□ -2.17
COMMD3-BMI1R4GMX3 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.47□□□□□ -2.17
COMMD3-BMI1R4GMX3 snoU2_19.1-201ENST00000362361 80 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms