Protein–RNA interactions for Protein: Q9Y663

HS3ST3A1, Heparan sulfate glucosamine 3-O-sulfotransferase 3A1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1Q9Y663 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
HS3ST3A1Q9Y663 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
HS3ST3A1Q9Y663 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
HS3ST3A1Q9Y663 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HS3ST3A1Q9Y663 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.45□□□□□ -1.86
HS3ST3A1Q9Y663 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.45□□□□□ -1.86
HS3ST3A1Q9Y663 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.45□□□□□ -1.86
HS3ST3A1Q9Y663 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
HS3ST3A1Q9Y663 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HS3ST3A1Q9Y663 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
HS3ST3A1Q9Y663 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HS3ST3A1Q9Y663 RNA5SP42-201ENST00000364278 115 ntBASIC3.45□□□□□ -1.86
HS3ST3A1Q9Y663 RNU6-215P-201ENST00000365169 102 ntBASIC3.45□□□□□ -1.86
HS3ST3A1Q9Y663 RNU6-326P-201ENST00000365480 107 ntBASIC3.45□□□□□ -1.86
HS3ST3A1Q9Y663 Y_RNA.405-201ENST00000383979 100 ntBASIC3.45□□□□□ -1.86
HS3ST3A1Q9Y663 Y_RNA.451-201ENST00000384200 100 ntBASIC3.45□□□□□ -1.86
HS3ST3A1Q9Y663 Y_RNA.524-201ENST00000384564 100 ntBASIC3.45□□□□□ -1.86
HS3ST3A1Q9Y663 Y_RNA.561-201ENST00000384694 100 ntBASIC3.45□□□□□ -1.86
HS3ST3A1Q9Y663 MIR521-1-201ENST00000384902 87 ntBASIC3.45□□□□□ -1.86
HS3ST3A1Q9Y663 Y_RNA.580-201ENST00000391004 95 ntBASIC3.45□□□□□ -1.86
HS3ST3A1Q9Y663 RNU5E-9P-201ENST00000411164 104 ntBASIC3.45□□□□□ -1.86
HS3ST3A1Q9Y663 Y_RNA.629-201ENST00000411368 105 ntBASIC3.45□□□□□ -1.86
HS3ST3A1Q9Y663 SNORD56-201ENST00000413522 71 ntBASIC3.45□□□□□ -1.86
HS3ST3A1Q9Y663 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.45□□□□□ -1.86
HS3ST3A1Q9Y663 AL358453.1-201ENST00000422522 250 ntBASIC3.45□□□□□ -1.86
HS3ST3A1Q9Y663 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.45□□□□□ -1.86
HS3ST3A1Q9Y663 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC3.45□□□□□ -1.86
HS3ST3A1Q9Y663 AP000873.1-201ENST00000463987 400 ntBASIC3.45□□□□□ -1.86
HS3ST3A1Q9Y663 BTF3L4P4-201ENST00000506381 449 ntBASIC3.45□□□□□ -1.86
HS3ST3A1Q9Y663 RN7SKP83-201ENST00000516512 178 ntBASIC3.45□□□□□ -1.86
HS3ST3A1Q9Y663 SNORA31.22-201ENST00000517204 135 ntBASIC3.45□□□□□ -1.86
HS3ST3A1Q9Y663 AP004371.1-201ENST00000525240 214 ntBASIC3.45□□□□□ -1.86
HS3ST3A1Q9Y663 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.45□□□□□ -1.86
HS3ST3A1Q9Y663 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.45□□□□□ -1.86
HS3ST3A1Q9Y663 AC104581.2-201ENST00000572227 430 ntBASIC3.45□□□□□ -1.86
HS3ST3A1Q9Y663 MIR4308-201ENST00000580634 81 ntBASIC3.45□□□□□ -1.86
HS3ST3A1Q9Y663 AC012531.5-201ENST00000611375 151 ntBASIC3.45□□□□□ -1.86
HS3ST3A1Q9Y663 AC011476.5-201ENST00000615594 130 ntBASIC3.45□□□□□ -1.86
HS3ST3A1Q9Y663 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HS3ST3A1Q9Y663 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HS3ST3A1Q9Y663 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HS3ST3A1Q9Y663 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
HS3ST3A1Q9Y663 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
HS3ST3A1Q9Y663 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
HS3ST3A1Q9Y663 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
HS3ST3A1Q9Y663 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HS3ST3A1Q9Y663 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HS3ST3A1Q9Y663 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
HS3ST3A1Q9Y663 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.44□□□□□ -1.86
HS3ST3A1Q9Y663 RNU4-90P-201ENST00000362773 141 ntBASIC3.44□□□□□ -1.86
HS3ST3A1Q9Y663 Y_RNA.82-201ENST00000363000 102 ntBASIC3.44□□□□□ -1.86
HS3ST3A1Q9Y663 Y_RNA.92-201ENST00000363043 102 ntBASIC3.44□□□□□ -1.86
HS3ST3A1Q9Y663 Y_RNA.235-201ENST00000364412 102 ntBASIC3.44□□□□□ -1.86
HS3ST3A1Q9Y663 Y_RNA.275-201ENST00000364726 110 ntBASIC3.44□□□□□ -1.86
HS3ST3A1Q9Y663 Y_RNA.306-201ENST00000365015 102 ntBASIC3.44□□□□□ -1.86
HS3ST3A1Q9Y663 Y_RNA.312-201ENST00000365089 102 ntBASIC3.44□□□□□ -1.86
HS3ST3A1Q9Y663 Y_RNA.322-201ENST00000365151 102 ntBASIC3.44□□□□□ -1.86
HS3ST3A1Q9Y663 RNU6-1130P-201ENST00000365434 107 ntBASIC3.44□□□□□ -1.86
HS3ST3A1Q9Y663 U3.19-201ENST00000390893 196 ntBASIC3.44□□□□□ -1.86
HS3ST3A1Q9Y663 AL138878.1-201ENST00000405131 347 ntBASIC3.44□□□□□ -1.86
HS3ST3A1Q9Y663 RPL23AP36-201ENST00000413895 458 ntBASIC3.44□□□□□ -1.86
HS3ST3A1Q9Y663 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.44□□□□□ -1.86
HS3ST3A1Q9Y663 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HS3ST3A1Q9Y663 AC017083.1-201ENST00000428093 483 ntBASIC3.44□□□□□ -1.86
HS3ST3A1Q9Y663 AC234775.1-201ENST00000454247 670 ntBASIC3.44□□□□□ -1.86
HS3ST3A1Q9Y663 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HS3ST3A1Q9Y663 Y_RNA.650-201ENST00000459002 102 ntBASIC3.44□□□□□ -1.86
HS3ST3A1Q9Y663 RN7SKP210-201ENST00000459176 261 ntBASIC3.44□□□□□ -1.86
HS3ST3A1Q9Y663 RNY3P16-201ENST00000516338 101 ntBASIC3.44□□□□□ -1.86
HS3ST3A1Q9Y663 Y_RNA.777-201ENST00000516982 102 ntBASIC3.44□□□□□ -1.86
HS3ST3A1Q9Y663 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HS3ST3A1Q9Y663 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HS3ST3A1Q9Y663 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.44□□□□□ -1.86
HS3ST3A1Q9Y663 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.44□□□□□ -1.86
HS3ST3A1Q9Y663 TRAV37-201ENST00000553906 342 ntBASIC3.44□□□□□ -1.86
HS3ST3A1Q9Y663 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HS3ST3A1Q9Y663 FAM60BP-201ENST00000578364 658 ntBASIC3.44□□□□□ -1.86
HS3ST3A1Q9Y663 MIR4659A-201ENST00000580269 81 ntBASIC3.44□□□□□ -1.86
HS3ST3A1Q9Y663 Y_RNA.771-201ENST00000598668 102 ntBASIC3.44□□□□□ -1.86
HS3ST3A1Q9Y663 AC009314.1-201ENST00000603871 304 ntBASIC3.44□□□□□ -1.86
HS3ST3A1Q9Y663 MIR8058-201ENST00000615737 89 ntBASIC3.44□□□□□ -1.86
HS3ST3A1Q9Y663 Y_RNA.789-201ENST00000622480 102 ntBASIC3.44□□□□□ -1.86
HS3ST3A1Q9Y663 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.44□□□□□ -1.86
HS3ST3A1Q9Y663 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.44□□□□□ -1.86
HS3ST3A1Q9Y663 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.44□□□□□ -1.86
HS3ST3A1Q9Y663 SDAD1P2-201ENST00000441308 2028 ntBASIC3.44□□□□□ -1.86
HS3ST3A1Q9Y663 AC018555.1-201ENST00000567548 1980 ntBASIC3.43□□□□□ -1.86
HS3ST3A1Q9Y663 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.43□□□□□ -1.86
HS3ST3A1Q9Y663 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.43□□□□□ -1.86
HS3ST3A1Q9Y663 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
HS3ST3A1Q9Y663 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HS3ST3A1Q9Y663 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
HS3ST3A1Q9Y663 RNU6-1301P-201ENST00000362724 104 ntBASIC3.43□□□□□ -1.86
HS3ST3A1Q9Y663 RNU6-1155P-201ENST00000363554 107 ntBASIC3.43□□□□□ -1.86
HS3ST3A1Q9Y663 Y_RNA.418-201ENST00000384029 102 ntBASIC3.43□□□□□ -1.86
HS3ST3A1Q9Y663 RNU6-1179P-201ENST00000384667 107 ntBASIC3.43□□□□□ -1.86
HS3ST3A1Q9Y663 Y_RNA.568-201ENST00000384742 113 ntBASIC3.43□□□□□ -1.86
HS3ST3A1Q9Y663 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
HS3ST3A1Q9Y663 AL592148.1-201ENST00000413568 445 ntBASIC3.43□□□□□ -1.86
HS3ST3A1Q9Y663 AL117339.3-201ENST00000418733 162 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 231.8 ms