Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.52□□□□□ -1.85
COL4A3BPQ9Y5P4 MIR4325-201ENST00000583049 90 ntBASIC3.52□□□□□ -1.85
COL4A3BPQ9Y5P4 MIR3117-201ENST00000584034 78 ntBASIC3.52□□□□□ -1.85
COL4A3BPQ9Y5P4 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.52□□□□□ -1.85
COL4A3BPQ9Y5P4 AC078795.3-201ENST00000602913 472 ntBASIC3.52□□□□□ -1.85
COL4A3BPQ9Y5P4 MIR6128-201ENST00000615528 109 ntBASIC3.52□□□□□ -1.85
COL4A3BPQ9Y5P4 AC104260.1-201ENST00000616660 539 ntBASIC3.52□□□□□ -1.85
COL4A3BPQ9Y5P4 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.52□□□□□ -1.85
COL4A3BPQ9Y5P4 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
COL4A3BPQ9Y5P4 AC092268.1-201ENST00000342691 405 ntBASIC3.51□□□□□ -1.85
COL4A3BPQ9Y5P4 SNORD32A-201ENST00000364805 84 ntBASIC3.51□□□□□ -1.85
COL4A3BPQ9Y5P4 RNU6-142P-201ENST00000384019 107 ntBASIC3.51□□□□□ -1.85
COL4A3BPQ9Y5P4 SNORA7.4-201ENST00000384249 137 ntBASIC3.51□□□□□ -1.85
COL4A3BPQ9Y5P4 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
COL4A3BPQ9Y5P4 SNORA48.5-201ENST00000391143 135 ntBASIC3.51□□□□□ -1.85
COL4A3BPQ9Y5P4 FO393413.1-201ENST00000402892 195 ntBASIC3.51□□□□□ -1.85
COL4A3BPQ9Y5P4 Z92545.1-201ENST00000411782 234 ntBASIC3.51□□□□□ -1.85
COL4A3BPQ9Y5P4 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.51□□□□□ -1.85
COL4A3BPQ9Y5P4 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.51□□□□□ -1.85
COL4A3BPQ9Y5P4 Y_RNA.635-201ENST00000459041 101 ntBASIC3.51□□□□□ -1.85
COL4A3BPQ9Y5P4 AC146507.2-201ENST00000460608 476 ntBASIC3.51□□□□□ -1.85
COL4A3BPQ9Y5P4 RPS29P2-201ENST00000479278 136 ntBASIC3.51□□□□□ -1.85
COL4A3BPQ9Y5P4 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.51□□□□□ -1.85
COL4A3BPQ9Y5P4 HSPE1P4-201ENST00000550617 308 ntBASIC3.51□□□□□ -1.85
COL4A3BPQ9Y5P4 AC007375.1-201ENST00000554513 578 ntBASIC3.51□□□□□ -1.85
COL4A3BPQ9Y5P4 AL670379.2-201ENST00000604983 252 ntBASIC3.51□□□□□ -1.85
COL4A3BPQ9Y5P4 AL353743.1-202ENST00000431724 1695 ntBASIC3.51□□□□□ -1.85
COL4A3BPQ9Y5P4 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.51□□□□□ -1.85
COL4A3BPQ9Y5P4 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.51□□□□□ -1.85
COL4A3BPQ9Y5P4 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
COL4A3BPQ9Y5P4 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
COL4A3BPQ9Y5P4 SNORD56.5-201ENST00000364281 72 ntBASIC3.5□□□□□ -1.85
COL4A3BPQ9Y5P4 U3.13-201ENST00000364804 214 ntBASIC3.5□□□□□ -1.85
COL4A3BPQ9Y5P4 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
COL4A3BPQ9Y5P4 AL133396.1-201ENST00000432048 687 ntBASIC3.5□□□□□ -1.85
COL4A3BPQ9Y5P4 AC244670.1-201ENST00000436879 112 ntBASIC3.5□□□□□ -1.85
COL4A3BPQ9Y5P4 AL445687.1-201ENST00000439946 251 ntBASIC3.5□□□□□ -1.85
COL4A3BPQ9Y5P4 AL031659.1-201ENST00000447075 539 ntBASIC3.5□□□□□ -1.85
COL4A3BPQ9Y5P4 EEF1B2P7-201ENST00000451177 676 ntBASIC3.5□□□□□ -1.85
COL4A3BPQ9Y5P4 RPS29P27-201ENST00000463711 170 ntBASIC3.5□□□□□ -1.85
COL4A3BPQ9Y5P4 RPL30P1-201ENST00000488676 339 ntBASIC3.5□□□□□ -1.85
COL4A3BPQ9Y5P4 AC022447.4-201ENST00000504053 364 ntBASIC3.5□□□□□ -1.85
COL4A3BPQ9Y5P4 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.5□□□□□ -1.85
COL4A3BPQ9Y5P4 RNU6-1016P-201ENST00000516689 94 ntBASIC3.5□□□□□ -1.85
COL4A3BPQ9Y5P4 AC105029.1-201ENST00000520250 669 ntBASIC3.5□□□□□ -1.85
COL4A3BPQ9Y5P4 AC068657.1-201ENST00000520807 306 ntBASIC3.5□□□□□ -1.85
COL4A3BPQ9Y5P4 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.5□□□□□ -1.85
COL4A3BPQ9Y5P4 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.5□□□□□ -1.85
COL4A3BPQ9Y5P4 MIR3136-201ENST00000583498 78 ntBASIC3.5□□□□□ -1.85
COL4A3BPQ9Y5P4 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.5□□□□□ -1.85
COL4A3BPQ9Y5P4 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
COL4A3BPQ9Y5P4 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.5□□□□□ -1.85
COL4A3BPQ9Y5P4 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
COL4A3BPQ9Y5P4 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
COL4A3BPQ9Y5P4 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
COL4A3BPQ9Y5P4 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
COL4A3BPQ9Y5P4 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
COL4A3BPQ9Y5P4 RNU6-1285P-201ENST00000363480 105 ntBASIC3.49□□□□□ -1.85
COL4A3BPQ9Y5P4 RNU4-56P-201ENST00000364700 142 ntBASIC3.49□□□□□ -1.85
COL4A3BPQ9Y5P4 Y_RNA.339-201ENST00000365325 102 ntBASIC3.49□□□□□ -1.85
COL4A3BPQ9Y5P4 RNU2-25P-201ENST00000411041 191 ntBASIC3.49□□□□□ -1.85
COL4A3BPQ9Y5P4 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.49□□□□□ -1.85
COL4A3BPQ9Y5P4 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.49□□□□□ -1.85
COL4A3BPQ9Y5P4 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.49□□□□□ -1.85
COL4A3BPQ9Y5P4 AC073901.1-201ENST00000462471 408 ntBASIC3.49□□□□□ -1.85
COL4A3BPQ9Y5P4 AL121594.1-201ENST00000475906 575 ntBASIC3.49□□□□□ -1.85
COL4A3BPQ9Y5P4 AIG1P1-201ENST00000503376 148 ntBASIC3.49□□□□□ -1.85
COL4A3BPQ9Y5P4 PTP4A1P4-201ENST00000512479 322 ntBASIC3.49□□□□□ -1.85
COL4A3BPQ9Y5P4 RN7SKP40-201ENST00000517211 242 ntBASIC3.49□□□□□ -1.85
COL4A3BPQ9Y5P4 SNORA31.26-201ENST00000517250 137 ntBASIC3.49□□□□□ -1.85
COL4A3BPQ9Y5P4 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.49□□□□□ -1.85
COL4A3BPQ9Y5P4 AC016256.1-201ENST00000547971 354 ntBASIC3.49□□□□□ -1.85
COL4A3BPQ9Y5P4 IMMP1LP2-201ENST00000552954 492 ntBASIC3.49□□□□□ -1.85
COL4A3BPQ9Y5P4 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.49□□□□□ -1.85
COL4A3BPQ9Y5P4 UBL5P2-201ENST00000583788 219 ntBASIC3.49□□□□□ -1.85
COL4A3BPQ9Y5P4 MIR3976-201ENST00000606807 139 ntBASIC3.49□□□□□ -1.85
COL4A3BPQ9Y5P4 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.49□□□□□ -1.85
COL4A3BPQ9Y5P4 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.49□□□□□ -1.85
COL4A3BPQ9Y5P4 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
COL4A3BPQ9Y5P4 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.49□□□□□ -1.85
COL4A3BPQ9Y5P4 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
COL4A3BPQ9Y5P4 MTND5P19-201ENST00000424872 1794 ntBASIC3.48□□□□□ -1.85
COL4A3BPQ9Y5P4 U3.6-201ENST00000363622 211 ntBASIC3.48□□□□□ -1.85
COL4A3BPQ9Y5P4 Y_RNA.263-201ENST00000364659 114 ntBASIC3.48□□□□□ -1.85
COL4A3BPQ9Y5P4 U8.8-201ENST00000365399 135 ntBASIC3.48□□□□□ -1.85
COL4A3BPQ9Y5P4 Y_RNA.482-201ENST00000384377 111 ntBASIC3.48□□□□□ -1.85
COL4A3BPQ9Y5P4 RNU6-306P-201ENST00000384617 107 ntBASIC3.48□□□□□ -1.85
COL4A3BPQ9Y5P4 CBX3P9-201ENST00000402326 552 ntBASIC3.48□□□□□ -1.85
COL4A3BPQ9Y5P4 AC245054.2-201ENST00000415639 319 ntBASIC3.48□□□□□ -1.85
COL4A3BPQ9Y5P4 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.48□□□□□ -1.85
COL4A3BPQ9Y5P4 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.48□□□□□ -1.85
COL4A3BPQ9Y5P4 RPS27P29-201ENST00000463110 252 ntBASIC3.48□□□□□ -1.85
COL4A3BPQ9Y5P4 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.48□□□□□ -1.85
COL4A3BPQ9Y5P4 AC140059.1-201ENST00000489238 361 ntBASIC3.48□□□□□ -1.85
COL4A3BPQ9Y5P4 RNA5SP341-201ENST00000516261 117 ntBASIC3.48□□□□□ -1.85
COL4A3BPQ9Y5P4 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.48□□□□□ -1.85
COL4A3BPQ9Y5P4 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.48□□□□□ -1.85
COL4A3BPQ9Y5P4 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.48□□□□□ -1.85
COL4A3BPQ9Y5P4 RPL30P11-203ENST00000598995 310 ntBASIC3.48□□□□□ -1.85
COL4A3BPQ9Y5P4 AL162274.2-201ENST00000614406 332 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 368.7 ms