Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 AL354751.2-201ENST00000415471 210 ntBASIC3.37□□□□□ -1.87
PCDHGA3Q9Y5H0 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.37□□□□□ -1.87
PCDHGA3Q9Y5H0 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PCDHGA3Q9Y5H0 RPL23AP95-201ENST00000426806 265 ntBASIC3.37□□□□□ -1.87
PCDHGA3Q9Y5H0 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.37□□□□□ -1.87
PCDHGA3Q9Y5H0 NDUFB1P1-201ENST00000435191 180 ntBASIC3.37□□□□□ -1.87
PCDHGA3Q9Y5H0 AL513124.1-201ENST00000450410 614 ntBASIC3.37□□□□□ -1.87
PCDHGA3Q9Y5H0 Y_RNA.631-201ENST00000459607 101 ntBASIC3.37□□□□□ -1.87
PCDHGA3Q9Y5H0 RPS29P2-201ENST00000479278 136 ntBASIC3.37□□□□□ -1.87
PCDHGA3Q9Y5H0 RPL17P19-201ENST00000489069 552 ntBASIC3.37□□□□□ -1.87
PCDHGA3Q9Y5H0 AC104564.1-201ENST00000493028 407 ntBASIC3.37□□□□□ -1.87
PCDHGA3Q9Y5H0 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.37□□□□□ -1.87
PCDHGA3Q9Y5H0 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.37□□□□□ -1.87
PCDHGA3Q9Y5H0 RNA5SP384-201ENST00000516615 116 ntBASIC3.37□□□□□ -1.87
PCDHGA3Q9Y5H0 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.37□□□□□ -1.87
PCDHGA3Q9Y5H0 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.37□□□□□ -1.87
PCDHGA3Q9Y5H0 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.37□□□□□ -1.87
PCDHGA3Q9Y5H0 AC011471.1-201ENST00000585766 187 ntBASIC3.37□□□□□ -1.87
PCDHGA3Q9Y5H0 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.37□□□□□ -1.87
PCDHGA3Q9Y5H0 AC009318.2-201ENST00000610917 651 ntBASIC3.37□□□□□ -1.87
PCDHGA3Q9Y5H0 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
PCDHGA3Q9Y5H0 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PCDHGA3Q9Y5H0 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.37□□□□□ -1.87
PCDHGA3Q9Y5H0 AP003122.5-201ENST00000527668 3766 ntBASIC3.37□□□□□ -1.87
PCDHGA3Q9Y5H0 MTND5P27-201ENST00000428871 1720 ntBASIC3.36□□□□□ -1.87
PCDHGA3Q9Y5H0 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
PCDHGA3Q9Y5H0 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.36□□□□□ -1.87
PCDHGA3Q9Y5H0 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
PCDHGA3Q9Y5H0 SNORA38.1-201ENST00000364172 131 ntBASIC3.36□□□□□ -1.87
PCDHGA3Q9Y5H0 RNU1-140P-201ENST00000365040 165 ntBASIC3.36□□□□□ -1.87
PCDHGA3Q9Y5H0 RNU6-805P-201ENST00000365643 106 ntBASIC3.36□□□□□ -1.87
PCDHGA3Q9Y5H0 Y_RNA.473-201ENST00000384333 102 ntBASIC3.36□□□□□ -1.87
PCDHGA3Q9Y5H0 MIR634-201ENST00000385208 97 ntBASIC3.36□□□□□ -1.87
PCDHGA3Q9Y5H0 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
PCDHGA3Q9Y5H0 SNORD17-201ENST00000390930 237 ntBASIC3.36□□□□□ -1.87
PCDHGA3Q9Y5H0 AL512633.1-201ENST00000399931 655 ntBASIC3.36□□□□□ -1.87
PCDHGA3Q9Y5H0 CYCSP48-201ENST00000417124 323 ntBASIC3.36□□□□□ -1.87
PCDHGA3Q9Y5H0 BX276092.3-201ENST00000424182 230 ntBASIC3.36□□□□□ -1.87
PCDHGA3Q9Y5H0 AC009414.1-201ENST00000427200 443 ntBASIC3.36□□□□□ -1.87
PCDHGA3Q9Y5H0 AC099799.1-201ENST00000439809 192 ntBASIC3.36□□□□□ -1.87
PCDHGA3Q9Y5H0 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.36□□□□□ -1.87
PCDHGA3Q9Y5H0 RN7SKP210-201ENST00000459176 261 ntBASIC3.36□□□□□ -1.87
PCDHGA3Q9Y5H0 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.36□□□□□ -1.87
PCDHGA3Q9Y5H0 RN7SL442P-201ENST00000473804 320 ntBASIC3.36□□□□□ -1.87
PCDHGA3Q9Y5H0 SNRPGP18-201ENST00000553000 214 ntBASIC3.36□□□□□ -1.87
PCDHGA3Q9Y5H0 AC007375.1-201ENST00000554513 578 ntBASIC3.36□□□□□ -1.87
PCDHGA3Q9Y5H0 SUB1P3-201ENST00000564581 315 ntBASIC3.36□□□□□ -1.87
PCDHGA3Q9Y5H0 AC137590.2-201ENST00000619709 240 ntBASIC3.36□□□□□ -1.87
PCDHGA3Q9Y5H0 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
PCDHGA3Q9Y5H0 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PCDHGA3Q9Y5H0 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PCDHGA3Q9Y5H0 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
PCDHGA3Q9Y5H0 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.35□□□□□ -1.87
PCDHGA3Q9Y5H0 AL109809.4-201ENST00000603520 2185 ntBASIC3.35□□□□□ -1.87
PCDHGA3Q9Y5H0 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PCDHGA3Q9Y5H0 MFSD8-233ENST00000641482 4860 ntBASIC3.35□□□□□ -1.87
PCDHGA3Q9Y5H0 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.35□□□□□ -1.87
PCDHGA3Q9Y5H0 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.35□□□□□ -1.87
PCDHGA3Q9Y5H0 MIR30E-201ENST00000362104 92 ntBASIC3.35□□□□□ -1.87
PCDHGA3Q9Y5H0 Y_RNA.112-201ENST00000363250 102 ntBASIC3.35□□□□□ -1.87
PCDHGA3Q9Y5H0 RNU6-595P-201ENST00000363944 107 ntBASIC3.35□□□□□ -1.87
PCDHGA3Q9Y5H0 SNORD32A-201ENST00000364805 84 ntBASIC3.35□□□□□ -1.87
PCDHGA3Q9Y5H0 Y_RNA.445-201ENST00000384168 102 ntBASIC3.35□□□□□ -1.87
PCDHGA3Q9Y5H0 MIR559-201ENST00000385188 96 ntBASIC3.35□□□□□ -1.87
PCDHGA3Q9Y5H0 U3.26-201ENST00000391236 204 ntBASIC3.35□□□□□ -1.87
PCDHGA3Q9Y5H0 MIR548P-201ENST00000408336 84 ntBASIC3.35□□□□□ -1.87
PCDHGA3Q9Y5H0 RNU2-23P-201ENST00000410545 195 ntBASIC3.35□□□□□ -1.87
PCDHGA3Q9Y5H0 AC096664.2-201ENST00000411843 406 ntBASIC3.35□□□□□ -1.87
PCDHGA3Q9Y5H0 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.35□□□□□ -1.87
PCDHGA3Q9Y5H0 NUP35P1-201ENST00000422734 947 ntBASIC3.35□□□□□ -1.87
PCDHGA3Q9Y5H0 AC006989.1-201ENST00000427212 131 ntBASIC3.35□□□□□ -1.87
PCDHGA3Q9Y5H0 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.35□□□□□ -1.87
PCDHGA3Q9Y5H0 BX679664.1-201ENST00000434429 253 ntBASIC3.35□□□□□ -1.87
PCDHGA3Q9Y5H0 AC004383.1-201ENST00000438135 289 ntBASIC3.35□□□□□ -1.87
PCDHGA3Q9Y5H0 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.35□□□□□ -1.87
PCDHGA3Q9Y5H0 AL031659.1-201ENST00000447075 539 ntBASIC3.35□□□□□ -1.87
PCDHGA3Q9Y5H0 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.35□□□□□ -1.87
PCDHGA3Q9Y5H0 AC022493.2-201ENST00000506122 481 ntBASIC3.35□□□□□ -1.87
PCDHGA3Q9Y5H0 SEM1P1-201ENST00000506694 209 ntBASIC3.35□□□□□ -1.87
PCDHGA3Q9Y5H0 SCARNA11.3-201ENST00000517276 130 ntBASIC3.35□□□□□ -1.87
PCDHGA3Q9Y5H0 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.35□□□□□ -1.87
PCDHGA3Q9Y5H0 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.35□□□□□ -1.87
PCDHGA3Q9Y5H0 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.35□□□□□ -1.87
PCDHGA3Q9Y5H0 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.35□□□□□ -1.87
PCDHGA3Q9Y5H0 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.35□□□□□ -1.87
PCDHGA3Q9Y5H0 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.35□□□□□ -1.87
PCDHGA3Q9Y5H0 AL353621.2-201ENST00000605340 133 ntBASIC3.35□□□□□ -1.87
PCDHGA3Q9Y5H0 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
PCDHGA3Q9Y5H0 MIR8057-201ENST00000620957 69 ntBASIC3.35□□□□□ -1.87
PCDHGA3Q9Y5H0 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
PCDHGA3Q9Y5H0 SNORD50.1-201ENST00000362987 71 ntBASIC3.34□□□□□ -1.87
PCDHGA3Q9Y5H0 RNY1P16-201ENST00000363063 111 ntBASIC3.34□□□□□ -1.87
PCDHGA3Q9Y5H0 RNA5SP42-201ENST00000364278 115 ntBASIC3.34□□□□□ -1.87
PCDHGA3Q9Y5H0 RNU6-700P-201ENST00000391043 107 ntBASIC3.34□□□□□ -1.87
PCDHGA3Q9Y5H0 AL590004.1-201ENST00000405321 300 ntBASIC3.34□□□□□ -1.87
PCDHGA3Q9Y5H0 DBIP2-201ENST00000419076 262 ntBASIC3.34□□□□□ -1.87
PCDHGA3Q9Y5H0 AC025518.1-201ENST00000479856 347 ntBASIC3.34□□□□□ -1.87
PCDHGA3Q9Y5H0 FO393415.2-201ENST00000480085 343 ntBASIC3.34□□□□□ -1.87
PCDHGA3Q9Y5H0 RPS4XP22-201ENST00000480755 780 ntBASIC3.34□□□□□ -1.87
PCDHGA3Q9Y5H0 RPL36AP48-201ENST00000485521 314 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms