Protein–RNA interactions for Protein: Q9Y4C0

NRXN3, Neurexin-3, humanhuman

Predictions only

Length 1,643 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN3Q9Y4C0 RNA5SP269-201ENST00000459032 137 ntBASIC-0.44□□□□□ -2.48
NRXN3Q9Y4C0 MEMO1P3-201ENST00000459811 302 ntBASIC-0.44□□□□□ -2.48
NRXN3Q9Y4C0 WDR78-207ENST00000488333 613 ntTSL 3 BASIC-0.44□□□□□ -2.48
NRXN3Q9Y4C0 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC-0.44□□□□□ -2.48
NRXN3Q9Y4C0 AL592221.1-201ENST00000605266 382 ntBASIC-0.44□□□□□ -2.48
NRXN3Q9Y4C0 AC012213.4-201ENST00000606457 354 ntBASIC-0.44□□□□□ -2.48
NRXN3Q9Y4C0 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC-0.45□□□□□ -2.48
NRXN3Q9Y4C0 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC-0.45□□□□□ -2.48
NRXN3Q9Y4C0 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC-0.45□□□□□ -2.48
NRXN3Q9Y4C0 AC007751.1-201ENST00000529260 376 ntBASIC-0.45□□□□□ -2.48
NRXN3Q9Y4C0 RNU6-244P-201ENST00000391028 104 ntBASIC-0.46□□□□□ -2.48
NRXN3Q9Y4C0 RNU6-952P-201ENST00000391164 108 ntBASIC-0.46□□□□□ -2.48
NRXN3Q9Y4C0 SSR1P1-201ENST00000407630 814 ntBASIC-0.46□□□□□ -2.48
NRXN3Q9Y4C0 RNU4-63P-201ENST00000411313 118 ntBASIC-0.46□□□□□ -2.48
NRXN3Q9Y4C0 VPS26BP1-201ENST00000417155 755 ntBASIC-0.46□□□□□ -2.48
NRXN3Q9Y4C0 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC-0.46□□□□□ -2.48
NRXN3Q9Y4C0 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC-0.46□□□□□ -2.48
NRXN3Q9Y4C0 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC-0.46□□□□□ -2.48
NRXN3Q9Y4C0 RNU6-1095P-201ENST00000516148 108 ntBASIC-0.46□□□□□ -2.48
NRXN3Q9Y4C0 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC-0.46□□□□□ -2.48
NRXN3Q9Y4C0 AL365434.2-201ENST00000607979 234 ntBASIC-0.46□□□□□ -2.48
NRXN3Q9Y4C0 MIR8064-201ENST00000612863 90 ntBASIC-0.46□□□□□ -2.48
NRXN3Q9Y4C0 U6.48-201ENST00000618523 106 ntBASIC-0.46□□□□□ -2.48
NRXN3Q9Y4C0 AC078974.1-201ENST00000411597 223 ntBASIC-0.46□□□□□ -2.48
NRXN3Q9Y4C0 RPL18AP17-201ENST00000455326 198 ntBASIC-0.46□□□□□ -2.48
NRXN3Q9Y4C0 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC-0.46□□□□□ -2.48
NRXN3Q9Y4C0 RNU6-1004P-201ENST00000516584 111 ntBASIC-0.46□□□□□ -2.48
NRXN3Q9Y4C0 IGKV1-22-201ENST00000524313 326 ntBASIC-0.46□□□□□ -2.48
NRXN3Q9Y4C0 TRAV32-201ENST00000553993 340 ntBASIC-0.46□□□□□ -2.48
NRXN3Q9Y4C0 FTX_3.1-201ENST00000610451 147 ntBASIC-0.46□□□□□ -2.48
NRXN3Q9Y4C0 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC-0.46□□□□□ -2.48
NRXN3Q9Y4C0 AL591034.2-201ENST00000402839 359 ntBASIC-0.47□□□□□ -2.48
NRXN3Q9Y4C0 AC138623.1-201ENST00000418060 216 ntBASIC-0.47□□□□□ -2.48
NRXN3Q9Y4C0 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC-0.47□□□□□ -2.48
NRXN3Q9Y4C0 RPL36AP48-201ENST00000485521 314 ntBASIC-0.47□□□□□ -2.48
NRXN3Q9Y4C0 AC114811.1-201ENST00000507207 168 ntBASIC-0.47□□□□□ -2.48
NRXN3Q9Y4C0 PTP4A1P4-201ENST00000512479 322 ntBASIC-0.47□□□□□ -2.48
NRXN3Q9Y4C0 AC025465.4-201ENST00000513422 638 ntBASIC-0.47□□□□□ -2.48
NRXN3Q9Y4C0 SNORD19.2-201ENST00000516978 73 ntBASIC-0.47□□□□□ -2.48
NRXN3Q9Y4C0 SNORA76.2-201ENST00000517095 137 ntBASIC-0.47□□□□□ -2.48
NRXN3Q9Y4C0 AC069113.3-201ENST00000521019 150 ntBASIC-0.47□□□□□ -2.48
NRXN3Q9Y4C0 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC-0.47□□□□□ -2.48
NRXN3Q9Y4C0 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.47□□□□□ -2.48
NRXN3Q9Y4C0 AC009268.1-201ENST00000561352 1203 ntBASIC-0.47□□□□□ -2.48
NRXN3Q9Y4C0 AC009712.1-201ENST00000564938 316 ntBASIC-0.47□□□□□ -2.48
NRXN3Q9Y4C0 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC-0.47□□□□□ -2.48
NRXN3Q9Y4C0 SNORA42.1-201ENST00000363515 137 ntBASIC-0.48□□□□□ -2.49
NRXN3Q9Y4C0 SNORD14D-201ENST00000384390 87 ntBASIC-0.48□□□□□ -2.49
NRXN3Q9Y4C0 RNU6-452P-201ENST00000384406 107 ntBASIC-0.48□□□□□ -2.49
NRXN3Q9Y4C0 RNU6-1054P-201ENST00000411293 104 ntBASIC-0.48□□□□□ -2.49
NRXN3Q9Y4C0 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC-0.48□□□□□ -2.49
NRXN3Q9Y4C0 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC-0.48□□□□□ -2.49
NRXN3Q9Y4C0 MIR548AZ-201ENST00000616567 95 ntBASIC-0.48□□□□□ -2.49
NRXN3Q9Y4C0 RMST_5.1-201ENST00000618704 126 ntBASIC-0.48□□□□□ -2.49
NRXN3Q9Y4C0 AC068647.2-201ENST00000637380 353 ntBASIC-0.48□□□□□ -2.49
NRXN3Q9Y4C0 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC-0.49□□□□□ -2.49
NRXN3Q9Y4C0 RNU6-72P-201ENST00000384285 79 ntBASIC-0.49□□□□□ -2.49
NRXN3Q9Y4C0 MIR888-201ENST00000401186 77 ntBASIC-0.49□□□□□ -2.49
NRXN3Q9Y4C0 AL590383.1-201ENST00000428602 75 ntBASIC-0.49□□□□□ -2.49
NRXN3Q9Y4C0 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC-0.49□□□□□ -2.49
NRXN3Q9Y4C0 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC-0.49□□□□□ -2.49
NRXN3Q9Y4C0 SMURF2P1-201ENST00000514992 481 ntBASIC-0.49□□□□□ -2.49
NRXN3Q9Y4C0 POLR2KP1-201ENST00000553226 168 ntBASIC-0.49□□□□□ -2.49
NRXN3Q9Y4C0 ROCK1P1-201ENST00000573767 549 ntBASIC-0.49□□□□□ -2.49
NRXN3Q9Y4C0 AC005261.5-201ENST00000596280 355 ntBASIC-0.49□□□□□ -2.49
NRXN3Q9Y4C0 MTND5P16-201ENST00000460269 1703 ntBASIC-0.49□□□□□ -2.49
NRXN3Q9Y4C0 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC-0.49□□□□□ -2.49
NRXN3Q9Y4C0 RNU6-1226P-201ENST00000384317 107 ntBASIC-0.49□□□□□ -2.49
NRXN3Q9Y4C0 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC-0.49□□□□□ -2.49
NRXN3Q9Y4C0 AL035398.1-201ENST00000430869 322 ntBASIC-0.49□□□□□ -2.49
NRXN3Q9Y4C0 FABP5P4-201ENST00000437203 171 ntBASIC-0.49□□□□□ -2.49
NRXN3Q9Y4C0 RPS20P24-201ENST00000457473 361 ntBASIC-0.49□□□□□ -2.49
NRXN3Q9Y4C0 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC-0.49□□□□□ -2.49
NRXN3Q9Y4C0 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC-0.49□□□□□ -2.49
NRXN3Q9Y4C0 AC023157.2-201ENST00000540596 141 ntBASIC-0.49□□□□□ -2.49
NRXN3Q9Y4C0 ABBA01006766.1-201ENST00000584728 294 ntBASIC-0.49□□□□□ -2.49
NRXN3Q9Y4C0 AL583856.2-201ENST00000606298 543 ntBASIC-0.49□□□□□ -2.49
NRXN3Q9Y4C0 AC021506.2-201ENST00000612354 169 ntBASIC-0.49□□□□□ -2.49
NRXN3Q9Y4C0 AC006213.4-201ENST00000616184 634 ntBASIC-0.49□□□□□ -2.49
NRXN3Q9Y4C0 5S_rRNA.11-201ENST00000618635 84 ntBASIC-0.49□□□□□ -2.49
NRXN3Q9Y4C0 RNU6-950P-201ENST00000384651 107 ntBASIC-0.5□□□□□ -2.49
NRXN3Q9Y4C0 MTCYBP32-201ENST00000427945 1084 ntBASIC-0.5□□□□□ -2.49
NRXN3Q9Y4C0 C8orf59P1-201ENST00000429930 303 ntBASIC-0.5□□□□□ -2.49
NRXN3Q9Y4C0 AL031313.1-201ENST00000448435 256 ntBASIC-0.5□□□□□ -2.49
NRXN3Q9Y4C0 AP002371.1-201ENST00000463604 433 ntBASIC-0.5□□□□□ -2.49
NRXN3Q9Y4C0 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC-0.5□□□□□ -2.49
NRXN3Q9Y4C0 AC116347.2-201ENST00000514912 523 ntBASIC-0.5□□□□□ -2.49
NRXN3Q9Y4C0 RNU6-667P-201ENST00000517186 102 ntBASIC-0.5□□□□□ -2.49
NRXN3Q9Y4C0 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC-0.5□□□□□ -2.49
NRXN3Q9Y4C0 AP002906.1-201ENST00000603405 233 ntBASIC-0.5□□□□□ -2.49
NRXN3Q9Y4C0 AC105148.1-201ENST00000604961 409 ntBASIC-0.5□□□□□ -2.49
NRXN3Q9Y4C0 AL355802.4-201ENST00000607635 548 ntBASIC-0.5□□□□□ -2.49
NRXN3Q9Y4C0 FTX_2.1-201ENST00000618816 94 ntBASIC-0.5□□□□□ -2.49
NRXN3Q9Y4C0 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC-0.51□□□□□ -2.49
NRXN3Q9Y4C0 SNORA16.2-201ENST00000390991 127 ntBASIC-0.51□□□□□ -2.49
NRXN3Q9Y4C0 RPS15AP9-201ENST00000439856 381 ntBASIC-0.51□□□□□ -2.49
NRXN3Q9Y4C0 snoU13.21-201ENST00000459368 105 ntBASIC-0.51□□□□□ -2.49
NRXN3Q9Y4C0 VPS26AP1-201ENST00000483197 979 ntBASIC-0.51□□□□□ -2.49
NRXN3Q9Y4C0 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC-0.51□□□□□ -2.49
NRXN3Q9Y4C0 SNORD79.1-201ENST00000516069 84 ntBASIC-0.51□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms