Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.9□□□□□ -1.95
PKP3Q9Y446 AL161756.2-201ENST00000604597 246 ntBASIC2.9□□□□□ -1.95
PKP3Q9Y446 AC018889.1-201ENST00000605372 397 ntBASIC2.9□□□□□ -1.95
PKP3Q9Y446 PISRT1.1-201ENST00000616930 107 ntBASIC2.9□□□□□ -1.95
PKP3Q9Y446 AC126177.8-201ENST00000618339 1015 ntBASIC2.9□□□□□ -1.95
PKP3Q9Y446 AC090617.7-201ENST00000623952 126 ntBASIC2.9□□□□□ -1.95
PKP3Q9Y446 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
PKP3Q9Y446 KPNA2P1-201ENST00000458289 1591 ntBASIC2.9□□□□□ -1.95
PKP3Q9Y446 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
PKP3Q9Y446 AC096644.4-201ENST00000563417 2912 ntBASIC2.89□□□□□ -1.95
PKP3Q9Y446 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
PKP3Q9Y446 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.89□□□□□ -1.95
PKP3Q9Y446 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
PKP3Q9Y446 SNORD56.1-201ENST00000362913 68 ntBASIC2.89□□□□□ -1.95
PKP3Q9Y446 RNU6-1188P-201ENST00000363795 107 ntBASIC2.89□□□□□ -1.95
PKP3Q9Y446 RNU6-694P-201ENST00000364071 147 ntBASIC2.89□□□□□ -1.95
PKP3Q9Y446 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
PKP3Q9Y446 RNU6-748P-201ENST00000384648 107 ntBASIC2.89□□□□□ -1.95
PKP3Q9Y446 MIR147B-201ENST00000390185 80 ntBASIC2.89□□□□□ -1.95
PKP3Q9Y446 RNY4P36-201ENST00000391116 96 ntBASIC2.89□□□□□ -1.95
PKP3Q9Y446 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
PKP3Q9Y446 Y_RNA.594-201ENST00000410373 140 ntBASIC2.89□□□□□ -1.95
PKP3Q9Y446 RNU6-1304P-201ENST00000411374 106 ntBASIC2.89□□□□□ -1.95
PKP3Q9Y446 EEF1A1P41-201ENST00000414667 207 ntBASIC2.89□□□□□ -1.95
PKP3Q9Y446 AC074117.2-201ENST00000417130 397 ntBASIC2.89□□□□□ -1.95
PKP3Q9Y446 USP9YP30-201ENST00000430729 455 ntBASIC2.89□□□□□ -1.95
PKP3Q9Y446 AL133396.1-201ENST00000432048 687 ntBASIC2.89□□□□□ -1.95
PKP3Q9Y446 SNORD5.1-201ENST00000458800 75 ntBASIC2.89□□□□□ -1.95
PKP3Q9Y446 AC133134.1-201ENST00000466800 359 ntBASIC2.89□□□□□ -1.95
PKP3Q9Y446 AP004217.1-201ENST00000480579 346 ntBASIC2.89□□□□□ -1.95
PKP3Q9Y446 PTP4A1P4-201ENST00000512479 322 ntBASIC2.89□□□□□ -1.95
PKP3Q9Y446 AC026782.1-201ENST00000512952 449 ntBASIC2.89□□□□□ -1.95
PKP3Q9Y446 SMURF2P1-201ENST00000514992 481 ntBASIC2.89□□□□□ -1.95
PKP3Q9Y446 RNA5SP385-201ENST00000515947 110 ntBASIC2.89□□□□□ -1.95
PKP3Q9Y446 ACA59.1-201ENST00000515966 143 ntBASIC2.89□□□□□ -1.95
PKP3Q9Y446 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.89□□□□□ -1.95
PKP3Q9Y446 RNU6-612P-201ENST00000516909 102 ntBASIC2.89□□□□□ -1.95
PKP3Q9Y446 SNORA31.18-201ENST00000517043 134 ntBASIC2.89□□□□□ -1.95
PKP3Q9Y446 Y_RNA.718-201ENST00000517110 102 ntBASIC2.89□□□□□ -1.95
PKP3Q9Y446 AC091564.4-201ENST00000533934 2194 ntBASIC2.89□□□□□ -1.95
PKP3Q9Y446 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.89□□□□□ -1.95
PKP3Q9Y446 AL050343.2-201ENST00000607338 280 ntBASIC2.89□□□□□ -1.95
PKP3Q9Y446 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.89□□□□□ -1.95
PKP3Q9Y446 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.89□□□□□ -1.95
PKP3Q9Y446 AC135507.2-201ENST00000612443 309 ntBASIC2.89□□□□□ -1.95
PKP3Q9Y446 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.89□□□□□ -1.95
PKP3Q9Y446 AC024581.2-201ENST00000619986 252 ntBASIC2.89□□□□□ -1.95
PKP3Q9Y446 AC098657.3-201ENST00000620434 263 ntBASIC2.89□□□□□ -1.95
PKP3Q9Y446 AC110079.1-202ENST00000635213 138 ntBASIC2.89□□□□□ -1.95
PKP3Q9Y446 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.89□□□□□ -1.95
PKP3Q9Y446 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
PKP3Q9Y446 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
PKP3Q9Y446 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.88□□□□□ -1.95
PKP3Q9Y446 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
PKP3Q9Y446 HAUS6P2-201ENST00000433254 2404 ntBASIC2.88□□□□□ -1.95
PKP3Q9Y446 RNU1-35P-201ENST00000362782 153 ntBASIC2.88□□□□□ -1.95
PKP3Q9Y446 SNORA9-201ENST00000384215 133 ntBASIC2.88□□□□□ -1.95
PKP3Q9Y446 RNU6-843P-201ENST00000384454 104 ntBASIC2.88□□□□□ -1.95
PKP3Q9Y446 SNORD116-29-201ENST00000384516 83 ntBASIC2.88□□□□□ -1.95
PKP3Q9Y446 MIR521-1-201ENST00000384902 87 ntBASIC2.88□□□□□ -1.95
PKP3Q9Y446 MIR512-1-201ENST00000384913 84 ntBASIC2.88□□□□□ -1.95
PKP3Q9Y446 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
PKP3Q9Y446 RNU6-1050P-201ENST00000410388 107 ntBASIC2.88□□□□□ -1.95
PKP3Q9Y446 RN7SKP123-201ENST00000410732 291 ntBASIC2.88□□□□□ -1.95
PKP3Q9Y446 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.88□□□□□ -1.95
PKP3Q9Y446 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.88□□□□□ -1.95
PKP3Q9Y446 Z82205.1-201ENST00000428456 297 ntBASIC2.88□□□□□ -1.95
PKP3Q9Y446 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.88□□□□□ -1.95
PKP3Q9Y446 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
PKP3Q9Y446 RPL23AP58-201ENST00000440453 469 ntBASIC2.88□□□□□ -1.95
PKP3Q9Y446 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.88□□□□□ -1.95
PKP3Q9Y446 Y_RNA.653-201ENST00000459091 95 ntBASIC2.88□□□□□ -1.95
PKP3Q9Y446 S100A11P2-201ENST00000467589 312 ntBASIC2.88□□□□□ -1.95
PKP3Q9Y446 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.88□□□□□ -1.95
PKP3Q9Y446 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.88□□□□□ -1.95
PKP3Q9Y446 AP005902.1-201ENST00000521358 186 ntBASIC2.88□□□□□ -1.95
PKP3Q9Y446 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.88□□□□□ -1.95
PKP3Q9Y446 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.88□□□□□ -1.95
PKP3Q9Y446 AL391813.1-201ENST00000603098 260 ntBASIC2.88□□□□□ -1.95
PKP3Q9Y446 AC019159.1-201ENST00000605094 187 ntBASIC2.88□□□□□ -1.95
PKP3Q9Y446 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.88□□□□□ -1.95
PKP3Q9Y446 AP000654.2-201ENST00000605633 586 ntBASIC2.88□□□□□ -1.95
PKP3Q9Y446 MIR3976-201ENST00000606807 139 ntBASIC2.88□□□□□ -1.95
PKP3Q9Y446 AL627309.6-201ENST00000606857 840 ntBASIC2.88□□□□□ -1.95
PKP3Q9Y446 AC093732.2-201ENST00000607950 274 ntBASIC2.88□□□□□ -1.95
PKP3Q9Y446 AC009229.3-201ENST00000608056 282 ntBASIC2.88□□□□□ -1.95
PKP3Q9Y446 AC084781.2-201ENST00000615568 161 ntBASIC2.88□□□□□ -1.95
PKP3Q9Y446 AC091953.5-201ENST00000622919 233 ntBASIC2.88□□□□□ -1.95
PKP3Q9Y446 AL669831.3-213ENST00000636676 183 ntBASIC2.88□□□□□ -1.95
PKP3Q9Y446 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
PKP3Q9Y446 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.88□□□□□ -1.95
PKP3Q9Y446 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
PKP3Q9Y446 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.87□□□□□ -1.95
PKP3Q9Y446 Y_RNA.473-201ENST00000384333 102 ntBASIC2.87□□□□□ -1.95
PKP3Q9Y446 SNORA75.4-201ENST00000391278 119 ntBASIC2.87□□□□□ -1.95
PKP3Q9Y446 MTND3P9-201ENST00000429526 346 ntBASIC2.87□□□□□ -1.95
PKP3Q9Y446 AC236972.1-201ENST00000433225 199 ntBASIC2.87□□□□□ -1.95
PKP3Q9Y446 RPL23AP83-201ENST00000434984 473 ntBASIC2.87□□□□□ -1.95
PKP3Q9Y446 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.87□□□□□ -1.95
PKP3Q9Y446 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms