Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC3.31□□□□□ -1.88
SSX2IPQ9Y2D8 RPL37P4-201ENST00000448908 268 ntBASIC3.31□□□□□ -1.88
SSX2IPQ9Y2D8 RNA5SP310-201ENST00000459084 116 ntBASIC3.31□□□□□ -1.88
SSX2IPQ9Y2D8 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.31□□□□□ -1.88
SSX2IPQ9Y2D8 AC113155.1-201ENST00000511141 769 ntBASIC3.31□□□□□ -1.88
SSX2IPQ9Y2D8 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.31□□□□□ -1.88
SSX2IPQ9Y2D8 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.31□□□□□ -1.88
SSX2IPQ9Y2D8 LINC00933-203ENST00000559812 219 ntBASIC3.31□□□□□ -1.88
SSX2IPQ9Y2D8 AL121917.1-203ENST00000605534 577 ntBASIC3.31□□□□□ -1.88
SSX2IPQ9Y2D8 AC011890.2-201ENST00000613393 294 ntBASIC3.31□□□□□ -1.88
SSX2IPQ9Y2D8 AL161629.2-201ENST00000615347 275 ntBASIC3.31□□□□□ -1.88
SSX2IPQ9Y2D8 AC092608.2-201ENST00000624427 218 ntBASIC3.31□□□□□ -1.88
SSX2IPQ9Y2D8 SCARNA4-202ENST00000625402 129 ntBASIC3.31□□□□□ -1.88
SSX2IPQ9Y2D8 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.31□□□□□ -1.88
SSX2IPQ9Y2D8 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.31□□□□□ -1.88
SSX2IPQ9Y2D8 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
SSX2IPQ9Y2D8 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SSX2IPQ9Y2D8 MIR22-201ENST00000362190 85 ntBASIC3.3□□□□□ -1.88
SSX2IPQ9Y2D8 RNU6-596P-201ENST00000365395 98 ntBASIC3.3□□□□□ -1.88
SSX2IPQ9Y2D8 RNU1-73P-201ENST00000383971 164 ntBASIC3.3□□□□□ -1.88
SSX2IPQ9Y2D8 RNU6-658P-201ENST00000384606 106 ntBASIC3.3□□□□□ -1.88
SSX2IPQ9Y2D8 RNA5SP344-201ENST00000411081 104 ntBASIC3.3□□□□□ -1.88
SSX2IPQ9Y2D8 RNU6-325P-201ENST00000411132 105 ntBASIC3.3□□□□□ -1.88
SSX2IPQ9Y2D8 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC3.3□□□□□ -1.88
SSX2IPQ9Y2D8 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.3□□□□□ -1.88
SSX2IPQ9Y2D8 AL139281.1-201ENST00000422120 335 ntBASIC3.3□□□□□ -1.88
SSX2IPQ9Y2D8 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.3□□□□□ -1.88
SSX2IPQ9Y2D8 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SSX2IPQ9Y2D8 MIR2053-201ENST00000459295 91 ntBASIC3.3□□□□□ -1.88
SSX2IPQ9Y2D8 RNA5SP217-201ENST00000515959 91 ntBASIC3.3□□□□□ -1.88
SSX2IPQ9Y2D8 ACA59.1-201ENST00000515966 143 ntBASIC3.3□□□□□ -1.88
SSX2IPQ9Y2D8 RNU6-56P-201ENST00000516986 93 ntBASIC3.3□□□□□ -1.88
SSX2IPQ9Y2D8 RNU6-1183P-201ENST00000517054 60 ntBASIC3.3□□□□□ -1.88
SSX2IPQ9Y2D8 RNU6-988P-201ENST00000519081 107 ntBASIC3.3□□□□□ -1.88
SSX2IPQ9Y2D8 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.3□□□□□ -1.88
SSX2IPQ9Y2D8 AC107016.2-201ENST00000547968 190 ntBASIC3.3□□□□□ -1.88
SSX2IPQ9Y2D8 CYCSP39-201ENST00000565821 309 ntBASIC3.3□□□□□ -1.88
SSX2IPQ9Y2D8 AMZ2P1-203ENST00000565833 850 ntBASIC3.3□□□□□ -1.88
SSX2IPQ9Y2D8 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.3□□□□□ -1.88
SSX2IPQ9Y2D8 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.3□□□□□ -1.88
SSX2IPQ9Y2D8 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.3□□□□□ -1.88
SSX2IPQ9Y2D8 AC018889.1-201ENST00000605372 397 ntBASIC3.3□□□□□ -1.88
SSX2IPQ9Y2D8 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.3□□□□□ -1.88
SSX2IPQ9Y2D8 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.3□□□□□ -1.88
SSX2IPQ9Y2D8 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SSX2IPQ9Y2D8 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SSX2IPQ9Y2D8 RPL9P7-201ENST00000330965 580 ntBASIC3.29□□□□□ -1.88
SSX2IPQ9Y2D8 Y_RNA.28-201ENST00000362554 111 ntBASIC3.29□□□□□ -1.88
SSX2IPQ9Y2D8 RNU6-778P-201ENST00000363269 103 ntBASIC3.29□□□□□ -1.88
SSX2IPQ9Y2D8 U3.6-201ENST00000363622 211 ntBASIC3.29□□□□□ -1.88
SSX2IPQ9Y2D8 RNU6-884P-201ENST00000363889 107 ntBASIC3.29□□□□□ -1.88
SSX2IPQ9Y2D8 Y_RNA.216-201ENST00000364205 93 ntBASIC3.29□□□□□ -1.88
SSX2IPQ9Y2D8 RNU5E-7P-201ENST00000365290 117 ntBASIC3.29□□□□□ -1.88
SSX2IPQ9Y2D8 SNORA33.2-201ENST00000365413 134 ntBASIC3.29□□□□□ -1.88
SSX2IPQ9Y2D8 RNU6-827P-201ENST00000365553 106 ntBASIC3.29□□□□□ -1.88
SSX2IPQ9Y2D8 RNU6-851P-201ENST00000384565 107 ntBASIC3.29□□□□□ -1.88
SSX2IPQ9Y2D8 NDUFS5P4-201ENST00000412983 318 ntBASIC3.29□□□□□ -1.88
SSX2IPQ9Y2D8 BMS1P22-201ENST00000414726 313 ntBASIC3.29□□□□□ -1.88
SSX2IPQ9Y2D8 AL117339.3-201ENST00000418733 162 ntBASIC3.29□□□□□ -1.88
SSX2IPQ9Y2D8 AL133396.1-201ENST00000432048 687 ntBASIC3.29□□□□□ -1.88
SSX2IPQ9Y2D8 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.29□□□□□ -1.88
SSX2IPQ9Y2D8 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.29□□□□□ -1.88
SSX2IPQ9Y2D8 AL513043.1-201ENST00000439124 535 ntBASIC3.29□□□□□ -1.88
SSX2IPQ9Y2D8 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.29□□□□□ -1.88
SSX2IPQ9Y2D8 NIPA2P5-201ENST00000452282 464 ntBASIC3.29□□□□□ -1.88
SSX2IPQ9Y2D8 AC006026.2-201ENST00000457376 180 ntBASIC3.29□□□□□ -1.88
SSX2IPQ9Y2D8 U8.21-201ENST00000459536 136 ntBASIC3.29□□□□□ -1.88
SSX2IPQ9Y2D8 RPL9P9-202ENST00000466501 579 ntBASIC3.29□□□□□ -1.88
SSX2IPQ9Y2D8 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.29□□□□□ -1.88
SSX2IPQ9Y2D8 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.29□□□□□ -1.88
SSX2IPQ9Y2D8 AC083906.5-201ENST00000503722 328 ntBASIC3.29□□□□□ -1.88
SSX2IPQ9Y2D8 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.29□□□□□ -1.88
SSX2IPQ9Y2D8 RNU6-470P-201ENST00000515954 104 ntBASIC3.29□□□□□ -1.88
SSX2IPQ9Y2D8 RNU6-377P-201ENST00000515965 102 ntBASIC3.29□□□□□ -1.88
SSX2IPQ9Y2D8 RNU6-327P-201ENST00000516270 127 ntBASIC3.29□□□□□ -1.88
SSX2IPQ9Y2D8 Y_RNA.687-201ENST00000516558 91 ntBASIC3.29□□□□□ -1.88
SSX2IPQ9Y2D8 AC109446.1-201ENST00000566172 220 ntBASIC3.29□□□□□ -1.88
SSX2IPQ9Y2D8 CPDP1-201ENST00000579660 283 ntBASIC3.29□□□□□ -1.88
SSX2IPQ9Y2D8 MIR3609-201ENST00000582661 80 ntBASIC3.29□□□□□ -1.88
SSX2IPQ9Y2D8 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.29□□□□□ -1.88
SSX2IPQ9Y2D8 AC016925.2-201ENST00000605108 242 ntBASIC3.29□□□□□ -1.88
SSX2IPQ9Y2D8 AC004852.3-201ENST00000614131 326 ntBASIC3.29□□□□□ -1.88
SSX2IPQ9Y2D8 MIR6076-201ENST00000617521 113 ntBASIC3.29□□□□□ -1.88
SSX2IPQ9Y2D8 AC006111.3-201ENST00000622137 383 ntBASIC3.29□□□□□ -1.88
SSX2IPQ9Y2D8 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.29□□□□□ -1.88
SSX2IPQ9Y2D8 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.29□□□□□ -1.88
SSX2IPQ9Y2D8 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
SSX2IPQ9Y2D8 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.29□□□□□ -1.88
SSX2IPQ9Y2D8 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.29□□□□□ -1.88
SSX2IPQ9Y2D8 AC009487.2-201ENST00000420969 6821 ntBASIC3.28□□□□□ -1.88
SSX2IPQ9Y2D8 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.28□□□□□ -1.88
SSX2IPQ9Y2D8 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SSX2IPQ9Y2D8 RNU6-490P-201ENST00000362985 107 ntBASIC3.28□□□□□ -1.88
SSX2IPQ9Y2D8 RNU6-1059P-201ENST00000363752 98 ntBASIC3.28□□□□□ -1.88
SSX2IPQ9Y2D8 SNORA22B-201ENST00000383876 138 ntBASIC3.28□□□□□ -1.88
SSX2IPQ9Y2D8 RNU6-842P-201ENST00000384269 107 ntBASIC3.28□□□□□ -1.88
SSX2IPQ9Y2D8 RNU6-72P-201ENST00000384285 79 ntBASIC3.28□□□□□ -1.88
SSX2IPQ9Y2D8 SNORA41-201ENST00000384675 132 ntBASIC3.28□□□□□ -1.88
SSX2IPQ9Y2D8 MIR606-201ENST00000384851 96 ntBASIC3.28□□□□□ -1.88
SSX2IPQ9Y2D8 RPS4XP3-201ENST00000398541 413 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms