Protein–RNA interactions for Protein: Q9UPN6

SCAF8, Protein SCAF8, humanhuman

Known RBP Predictions only

Length 1,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8Q9UPN6 AL355802.3-201ENST00000607571 545 ntBASIC3.36□□□□□ -1.87
SCAF8Q9UPN6 AC098657.3-201ENST00000620434 263 ntBASIC3.36□□□□□ -1.87
SCAF8Q9UPN6 U6.99-201ENST00000637524 83 ntBASIC3.36□□□□□ -1.87
SCAF8Q9UPN6 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.36□□□□□ -1.87
SCAF8Q9UPN6 AC103988.1-201ENST00000566382 2177 ntBASIC3.36□□□□□ -1.87
SCAF8Q9UPN6 MAPK10-322ENST00000641485 4530 ntBASIC3.36□□□□□ -1.87
SCAF8Q9UPN6 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.36□□□□□ -1.87
SCAF8Q9UPN6 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
SCAF8Q9UPN6 Y_RNA.31-201ENST00000362574 102 ntBASIC3.35□□□□□ -1.87
SCAF8Q9UPN6 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SCAF8Q9UPN6 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
SCAF8Q9UPN6 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.35□□□□□ -1.87
SCAF8Q9UPN6 AC245291.1-201ENST00000419501 328 ntBASIC3.35□□□□□ -1.87
SCAF8Q9UPN6 BPY2DP-201ENST00000422208 265 ntBASIC3.35□□□□□ -1.87
SCAF8Q9UPN6 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.35□□□□□ -1.87
SCAF8Q9UPN6 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.35□□□□□ -1.87
SCAF8Q9UPN6 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.35□□□□□ -1.87
SCAF8Q9UPN6 RPS3P1-201ENST00000456781 192 ntBASIC3.35□□□□□ -1.87
SCAF8Q9UPN6 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.35□□□□□ -1.87
SCAF8Q9UPN6 MIR892C-201ENST00000516410 77 ntBASIC3.35□□□□□ -1.87
SCAF8Q9UPN6 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.35□□□□□ -1.87
SCAF8Q9UPN6 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.35□□□□□ -1.87
SCAF8Q9UPN6 DNAJC8P1-201ENST00000554535 372 ntBASIC3.35□□□□□ -1.87
SCAF8Q9UPN6 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.35□□□□□ -1.87
SCAF8Q9UPN6 AC012119.1-201ENST00000603184 222 ntBASIC3.35□□□□□ -1.87
SCAF8Q9UPN6 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.35□□□□□ -1.87
SCAF8Q9UPN6 MIR6817-201ENST00000615588 66 ntBASIC3.35□□□□□ -1.87
SCAF8Q9UPN6 uc_338.22-201ENST00000622722 187 ntBASIC3.35□□□□□ -1.87
SCAF8Q9UPN6 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.35□□□□□ -1.87
SCAF8Q9UPN6 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SCAF8Q9UPN6 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.34□□□□□ -1.87
SCAF8Q9UPN6 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.34□□□□□ -1.87
SCAF8Q9UPN6 MTND5P19-201ENST00000424872 1794 ntBASIC3.34□□□□□ -1.87
SCAF8Q9UPN6 RNU1-105P-201ENST00000363470 161 ntBASIC3.34□□□□□ -1.87
SCAF8Q9UPN6 SNORA22B-201ENST00000383876 138 ntBASIC3.34□□□□□ -1.87
SCAF8Q9UPN6 RNU6-128P-201ENST00000383976 107 ntBASIC3.34□□□□□ -1.87
SCAF8Q9UPN6 RNU6-166P-201ENST00000384371 107 ntBASIC3.34□□□□□ -1.87
SCAF8Q9UPN6 RNU6-308P-201ENST00000390957 107 ntBASIC3.34□□□□□ -1.87
SCAF8Q9UPN6 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.34□□□□□ -1.87
SCAF8Q9UPN6 ATG3P1-201ENST00000419507 911 ntBASIC3.34□□□□□ -1.87
SCAF8Q9UPN6 PMCHL1-202ENST00000423102 261 ntBASIC3.34□□□□□ -1.87
SCAF8Q9UPN6 RPL7P37-201ENST00000425095 738 ntBASIC3.34□□□□□ -1.87
SCAF8Q9UPN6 AC007560.1-201ENST00000426912 237 ntBASIC3.34□□□□□ -1.87
SCAF8Q9UPN6 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.34□□□□□ -1.87
SCAF8Q9UPN6 RPS27AP10-201ENST00000496103 208 ntBASIC3.34□□□□□ -1.87
SCAF8Q9UPN6 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
SCAF8Q9UPN6 RNU6-1332P-201ENST00000516666 104 ntBASIC3.34□□□□□ -1.87
SCAF8Q9UPN6 RNU6-1183P-201ENST00000517054 60 ntBASIC3.34□□□□□ -1.87
SCAF8Q9UPN6 RNU6-1213P-201ENST00000517075 94 ntBASIC3.34□□□□□ -1.87
SCAF8Q9UPN6 AC069113.1-201ENST00000517763 267 ntBASIC3.34□□□□□ -1.87
SCAF8Q9UPN6 RNU6-323P-201ENST00000521915 107 ntBASIC3.34□□□□□ -1.87
SCAF8Q9UPN6 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.34□□□□□ -1.87
SCAF8Q9UPN6 SNRPGP18-201ENST00000553000 214 ntBASIC3.34□□□□□ -1.87
SCAF8Q9UPN6 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.34□□□□□ -1.87
SCAF8Q9UPN6 AC016925.2-201ENST00000605108 242 ntBASIC3.34□□□□□ -1.87
SCAF8Q9UPN6 AC019193.3-201ENST00000609144 554 ntBASIC3.34□□□□□ -1.87
SCAF8Q9UPN6 AC010378.1-201ENST00000619270 362 ntBASIC3.34□□□□□ -1.87
SCAF8Q9UPN6 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.34□□□□□ -1.87
SCAF8Q9UPN6 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
SCAF8Q9UPN6 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.34□□□□□ -1.87
SCAF8Q9UPN6 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.88
SCAF8Q9UPN6 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.34□□□□□ -1.88
SCAF8Q9UPN6 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.33□□□□□ -1.88
SCAF8Q9UPN6 MTND5P10-201ENST00000603719 1809 ntBASIC3.33□□□□□ -1.88
SCAF8Q9UPN6 RNU6-859P-201ENST00000362728 107 ntBASIC3.33□□□□□ -1.88
SCAF8Q9UPN6 RNU6-799P-201ENST00000363567 107 ntBASIC3.33□□□□□ -1.88
SCAF8Q9UPN6 RNA5SP139-201ENST00000364340 117 ntBASIC3.33□□□□□ -1.88
SCAF8Q9UPN6 RNU6-593P-201ENST00000364716 112 ntBASIC3.33□□□□□ -1.88
SCAF8Q9UPN6 RNU6-658P-201ENST00000384606 106 ntBASIC3.33□□□□□ -1.88
SCAF8Q9UPN6 RNU6-310P-201ENST00000384655 107 ntBASIC3.33□□□□□ -1.88
SCAF8Q9UPN6 RN7SKP123-201ENST00000410732 291 ntBASIC3.33□□□□□ -1.88
SCAF8Q9UPN6 AL590632.1-201ENST00000424289 371 ntBASIC3.33□□□□□ -1.88
SCAF8Q9UPN6 AL365496.1-201ENST00000426885 215 ntBASIC3.33□□□□□ -1.88
SCAF8Q9UPN6 TOMM20P4-201ENST00000427861 435 ntBASIC3.33□□□□□ -1.88
SCAF8Q9UPN6 AL137792.2-201ENST00000443484 235 ntBASIC3.33□□□□□ -1.88
SCAF8Q9UPN6 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.33□□□□□ -1.88
SCAF8Q9UPN6 AL031183.1-201ENST00000457667 207 ntBASIC3.33□□□□□ -1.88
SCAF8Q9UPN6 AC010401.1-201ENST00000463867 348 ntBASIC3.33□□□□□ -1.88
SCAF8Q9UPN6 RN7SL442P-201ENST00000473804 320 ntBASIC3.33□□□□□ -1.88
SCAF8Q9UPN6 AC011005.2-201ENST00000487324 359 ntBASIC3.33□□□□□ -1.88
SCAF8Q9UPN6 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.33□□□□□ -1.88
SCAF8Q9UPN6 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.33□□□□□ -1.88
SCAF8Q9UPN6 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.33□□□□□ -1.88
SCAF8Q9UPN6 AC022634.1-201ENST00000520765 532 ntBASIC3.33□□□□□ -1.88
SCAF8Q9UPN6 AC104027.1-201ENST00000521887 300 ntBASIC3.33□□□□□ -1.88
SCAF8Q9UPN6 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.33□□□□□ -1.88
SCAF8Q9UPN6 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.33□□□□□ -1.88
SCAF8Q9UPN6 AC073539.2-201ENST00000597113 165 ntBASIC3.33□□□□□ -1.88
SCAF8Q9UPN6 AP000942.4-201ENST00000604811 241 ntBASIC3.33□□□□□ -1.88
SCAF8Q9UPN6 MIR6128-201ENST00000615528 109 ntBASIC3.33□□□□□ -1.88
SCAF8Q9UPN6 AL590808.1-201ENST00000618696 141 ntBASIC3.33□□□□□ -1.88
SCAF8Q9UPN6 MIR7843-201ENST00000622274 79 ntBASIC3.33□□□□□ -1.88
SCAF8Q9UPN6 AL031601.2-202ENST00000622650 282 ntBASIC3.33□□□□□ -1.88
SCAF8Q9UPN6 AL669831.3-213ENST00000636676 183 ntBASIC3.33□□□□□ -1.88
SCAF8Q9UPN6 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.33□□□□□ -1.88
SCAF8Q9UPN6 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.33□□□□□ -1.88
SCAF8Q9UPN6 AC091564.4-201ENST00000533934 2194 ntBASIC3.32□□□□□ -1.88
SCAF8Q9UPN6 RNU1-75P-201ENST00000347264 129 ntBASIC3.32□□□□□ -1.88
SCAF8Q9UPN6 RNU6-1303P-201ENST00000364841 107 ntBASIC3.32□□□□□ -1.88
SCAF8Q9UPN6 SNORA70B-201ENST00000384210 135 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms