Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 RNU6-552P-201ENST00000362869 119 ntBASIC4.07□□□□□ -1.76
SHROOM4Q9ULL8 Y_RNA.116-201ENST00000363292 103 ntBASIC4.07□□□□□ -1.76
SHROOM4Q9ULL8 RNU6-1085P-201ENST00000363576 107 ntBASIC4.07□□□□□ -1.76
SHROOM4Q9ULL8 Y_RNA.355-201ENST00000365462 98 ntBASIC4.07□□□□□ -1.76
SHROOM4Q9ULL8 MIR518E-201ENST00000385252 88 ntBASIC4.07□□□□□ -1.76
SHROOM4Q9ULL8 SNORA48.3-201ENST00000391081 134 ntBASIC4.07□□□□□ -1.76
SHROOM4Q9ULL8 AC068050.1-201ENST00000394891 380 ntBASIC4.07□□□□□ -1.76
SHROOM4Q9ULL8 SNORA11.4-201ENST00000408823 129 ntBASIC4.07□□□□□ -1.76
SHROOM4Q9ULL8 RNA5SP390-201ENST00000410191 113 ntBASIC4.07□□□□□ -1.76
SHROOM4Q9ULL8 RNA5SP344-201ENST00000411081 104 ntBASIC4.07□□□□□ -1.76
SHROOM4Q9ULL8 AL353193.1-201ENST00000421444 268 ntBASIC4.07□□□□□ -1.76
SHROOM4Q9ULL8 AL445646.1-201ENST00000431784 216 ntBASIC4.07□□□□□ -1.76
SHROOM4Q9ULL8 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.07□□□□□ -1.76
SHROOM4Q9ULL8 AC079598.5-201ENST00000547460 117 ntBASIC4.07□□□□□ -1.76
SHROOM4Q9ULL8 HIF1AP1-201ENST00000553642 175 ntBASIC4.07□□□□□ -1.76
SHROOM4Q9ULL8 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC4.07□□□□□ -1.76
SHROOM4Q9ULL8 AL359821.1-201ENST00000605519 182 ntBASIC4.07□□□□□ -1.76
SHROOM4Q9ULL8 HULC.1-201ENST00000612720 240 ntBASIC4.07□□□□□ -1.76
SHROOM4Q9ULL8 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
SHROOM4Q9ULL8 RMST_7.1-201ENST00000621935 268 ntBASIC4.07□□□□□ -1.76
SHROOM4Q9ULL8 AC022418.1-201ENST00000624118 445 ntBASIC4.07□□□□□ -1.76
SHROOM4Q9ULL8 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SHROOM4Q9ULL8 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
SHROOM4Q9ULL8 RNU5E-7P-201ENST00000365290 117 ntBASIC4.06□□□□□ -1.76
SHROOM4Q9ULL8 MTCO3P40-201ENST00000392516 676 ntBASIC4.06□□□□□ -1.76
SHROOM4Q9ULL8 CYCSP33-201ENST00000414485 327 ntBASIC4.06□□□□□ -1.76
SHROOM4Q9ULL8 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC4.06□□□□□ -1.76
SHROOM4Q9ULL8 AL606489.2-201ENST00000433886 234 ntBASIC4.06□□□□□ -1.76
SHROOM4Q9ULL8 RPL7P43-201ENST00000478876 753 ntBASIC4.06□□□□□ -1.76
SHROOM4Q9ULL8 AC018437.1-201ENST00000492214 406 ntBASIC4.06□□□□□ -1.76
SHROOM4Q9ULL8 MTND2P33-201ENST00000506452 1031 ntBASIC4.06□□□□□ -1.76
SHROOM4Q9ULL8 RNA5SP385-201ENST00000515947 110 ntBASIC4.06□□□□□ -1.76
SHROOM4Q9ULL8 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC4.06□□□□□ -1.76
SHROOM4Q9ULL8 RPS15AP11-201ENST00000594193 385 ntBASIC4.06□□□□□ -1.76
SHROOM4Q9ULL8 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
SHROOM4Q9ULL8 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SHROOM4Q9ULL8 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
SHROOM4Q9ULL8 RNU1-109P-201ENST00000383960 147 ntBASIC4.05□□□□□ -1.76
SHROOM4Q9ULL8 RNU1-138P-201ENST00000384093 164 ntBASIC4.05□□□□□ -1.76
SHROOM4Q9ULL8 RNU6-220P-201ENST00000390919 107 ntBASIC4.05□□□□□ -1.76
SHROOM4Q9ULL8 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
SHROOM4Q9ULL8 UBE2V1P10-201ENST00000414685 269 ntBASIC4.05□□□□□ -1.76
SHROOM4Q9ULL8 RPS3AP44-201ENST00000425466 790 ntBASIC4.05□□□□□ -1.76
SHROOM4Q9ULL8 RPL37P25-201ENST00000507308 276 ntBASIC4.05□□□□□ -1.76
SHROOM4Q9ULL8 AP001330.5-201ENST00000607176 411 ntBASIC4.05□□□□□ -1.76
SHROOM4Q9ULL8 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC4.05□□□□□ -1.76
SHROOM4Q9ULL8 AL606923.1-201ENST00000406616 190 ntBASIC4.05□□□□□ -1.76
SHROOM4Q9ULL8 OR9R1P-201ENST00000412200 877 ntBASIC4.05□□□□□ -1.76
SHROOM4Q9ULL8 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC4.05□□□□□ -1.76
SHROOM4Q9ULL8 LAMTOR5P1-201ENST00000444290 270 ntBASIC4.05□□□□□ -1.76
SHROOM4Q9ULL8 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC4.05□□□□□ -1.76
SHROOM4Q9ULL8 RPL38P4-201ENST00000502376 214 ntBASIC4.05□□□□□ -1.76
SHROOM4Q9ULL8 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC4.05□□□□□ -1.76
SHROOM4Q9ULL8 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC4.05□□□□□ -1.76
SHROOM4Q9ULL8 SNORA25.11-201ENST00000515935 105 ntBASIC4.05□□□□□ -1.76
SHROOM4Q9ULL8 AP001893.2-201ENST00000526949 202 ntBASIC4.05□□□□□ -1.76
SHROOM4Q9ULL8 AC104383.1-201ENST00000530297 370 ntBASIC4.05□□□□□ -1.76
SHROOM4Q9ULL8 AC007536.1-201ENST00000533382 349 ntBASIC4.05□□□□□ -1.76
SHROOM4Q9ULL8 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC4.05□□□□□ -1.76
SHROOM4Q9ULL8 AC021646.1-201ENST00000605469 484 ntBASIC4.05□□□□□ -1.76
SHROOM4Q9ULL8 AP001596.2-201ENST00000608410 312 ntBASIC4.05□□□□□ -1.76
SHROOM4Q9ULL8 U2.17-201ENST00000611454 95 ntBASIC4.05□□□□□ -1.76
SHROOM4Q9ULL8 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC4.04□□□□□ -1.76
SHROOM4Q9ULL8 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
SHROOM4Q9ULL8 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
SHROOM4Q9ULL8 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
SHROOM4Q9ULL8 RNU6-527P-201ENST00000363425 104 ntBASIC4.04□□□□□ -1.76
SHROOM4Q9ULL8 SNORA38-201ENST00000363946 132 ntBASIC4.04□□□□□ -1.76
SHROOM4Q9ULL8 RNU6-487P-201ENST00000365430 104 ntBASIC4.04□□□□□ -1.76
SHROOM4Q9ULL8 Y_RNA.409-201ENST00000383990 98 ntBASIC4.04□□□□□ -1.76
SHROOM4Q9ULL8 MORN2-203ENST00000409131 544 ntTSL 5 BASIC4.04□□□□□ -1.76
SHROOM4Q9ULL8 RPL30P4-201ENST00000429309 333 ntBASIC4.04□□□□□ -1.76
SHROOM4Q9ULL8 AL591043.1-201ENST00000432461 424 ntBASIC4.04□□□□□ -1.76
SHROOM4Q9ULL8 RPL21P2-201ENST00000440049 481 ntBASIC4.04□□□□□ -1.76
SHROOM4Q9ULL8 AC073415.1-201ENST00000449240 153 ntBASIC4.04□□□□□ -1.76
SHROOM4Q9ULL8 RNU6-261P-201ENST00000459506 102 ntBASIC4.04□□□□□ -1.76
SHROOM4Q9ULL8 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC4.04□□□□□ -1.76
SHROOM4Q9ULL8 RNU2-69P-201ENST00000516061 100 ntBASIC4.04□□□□□ -1.76
SHROOM4Q9ULL8 MTCO3P13-201ENST00000577757 781 ntBASIC4.04□□□□□ -1.76
SHROOM4Q9ULL8 AL137847.3-201ENST00000611521 109 ntBASIC4.04□□□□□ -1.76
SHROOM4Q9ULL8 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC4.04□□□□□ -1.76
SHROOM4Q9ULL8 MIR5739-201ENST00000619803 80 ntBASIC4.04□□□□□ -1.76
SHROOM4Q9ULL8 AC024581.2-201ENST00000619986 252 ntBASIC4.04□□□□□ -1.76
SHROOM4Q9ULL8 Y_RNA.318-201ENST00000365131 97 ntBASIC4.03□□□□□ -1.76
SHROOM4Q9ULL8 Y_RNA.399-201ENST00000383955 105 ntBASIC4.03□□□□□ -1.76
SHROOM4Q9ULL8 AL096701.2-201ENST00000416920 238 ntBASIC4.03□□□□□ -1.76
SHROOM4Q9ULL8 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC4.03□□□□□ -1.76
SHROOM4Q9ULL8 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC4.03□□□□□ -1.76
SHROOM4Q9ULL8 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC4.03□□□□□ -1.76
SHROOM4Q9ULL8 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC4.03□□□□□ -1.76
SHROOM4Q9ULL8 MIR3683-201ENST00000580847 82 ntBASIC4.03□□□□□ -1.76
SHROOM4Q9ULL8 BNIP3P30-201ENST00000601184 574 ntBASIC4.03□□□□□ -1.76
SHROOM4Q9ULL8 RBBP8P1-201ENST00000449447 1844 ntBASIC4.03□□□□□ -1.76
SHROOM4Q9ULL8 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC4.02□□□□□ -1.77
SHROOM4Q9ULL8 AC016691.1-201ENST00000441321 413 ntBASIC4.02□□□□□ -1.77
SHROOM4Q9ULL8 AC124916.1-201ENST00000444020 547 ntBASIC4.02□□□□□ -1.77
SHROOM4Q9ULL8 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC4.02□□□□□ -1.77
SHROOM4Q9ULL8 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC4.02□□□□□ -1.77
SHROOM4Q9ULL8 AC105245.1-201ENST00000581934 244 ntBASIC4.02□□□□□ -1.77
SHROOM4Q9ULL8 AL121917.1-203ENST00000605534 577 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms