Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 MTATP6P9-201ENST00000515039 680 ntBASIC-0.11□□□□□ -2.43
SCN11AQ9UI33 AC023158.1-201ENST00000561632 1025 ntBASIC-0.11□□□□□ -2.43
SCN11AQ9UI33 AL158211.1-201ENST00000566763 763 ntBASIC-0.11□□□□□ -2.43
SCN11AQ9UI33 AC011939.3-201ENST00000613686 466 ntBASIC-0.11□□□□□ -2.43
SCN11AQ9UI33 AL109620.1-201ENST00000618738 1197 ntBASIC-0.11□□□□□ -2.43
SCN11AQ9UI33 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC-0.11□□□□□ -2.43
SCN11AQ9UI33 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC-0.12□□□□□ -2.43
SCN11AQ9UI33 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.12□□□□□ -2.43
SCN11AQ9UI33 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC-0.12□□□□□ -2.43
SCN11AQ9UI33 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC-0.12□□□□□ -2.43
SCN11AQ9UI33 SNORD114-9-201ENST00000364370 72 ntBASIC-0.12□□□□□ -2.43
SCN11AQ9UI33 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.12□□□□□ -2.43
SCN11AQ9UI33 ZNF92P1Y-201ENST00000415010 1191 ntBASIC-0.12□□□□□ -2.43
SCN11AQ9UI33 HMGN2P34-201ENST00000437647 269 ntBASIC-0.12□□□□□ -2.43
SCN11AQ9UI33 AC002429.1-201ENST00000437672 148 ntBASIC-0.12□□□□□ -2.43
SCN11AQ9UI33 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC-0.12□□□□□ -2.43
SCN11AQ9UI33 MTCO1P18-201ENST00000455518 1419 ntBASIC-0.12□□□□□ -2.43
SCN11AQ9UI33 WDR78-207ENST00000488333 613 ntTSL 3 BASIC-0.12□□□□□ -2.43
SCN11AQ9UI33 RNA5SP227-201ENST00000516184 113 ntBASIC-0.12□□□□□ -2.43
SCN11AQ9UI33 RNU4-18P-201ENST00000516751 149 ntBASIC-0.12□□□□□ -2.43
SCN11AQ9UI33 IL7-206ENST00000520269 456 ntTSL 3 BASIC-0.12□□□□□ -2.43
SCN11AQ9UI33 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC-0.12□□□□□ -2.43
SCN11AQ9UI33 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC-0.12□□□□□ -2.43
SCN11AQ9UI33 MIR3678-201ENST00000578455 94 ntBASIC-0.12□□□□□ -2.43
SCN11AQ9UI33 AC069114.2-201ENST00000604699 304 ntBASIC-0.12□□□□□ -2.43
SCN11AQ9UI33 AC105148.1-201ENST00000604961 409 ntBASIC-0.12□□□□□ -2.43
SCN11AQ9UI33 HMGB1P51-201ENST00000605166 638 ntBASIC-0.12□□□□□ -2.43
SCN11AQ9UI33 AC004067.1-201ENST00000608733 700 ntBASIC-0.12□□□□□ -2.43
SCN11AQ9UI33 AC079416.3-201ENST00000624479 549 ntBASIC-0.12□□□□□ -2.43
SCN11AQ9UI33 MIR1295B-201ENST00000636144 60 ntBASIC-0.12□□□□□ -2.43
SCN11AQ9UI33 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC-0.13□□□□□ -2.43
SCN11AQ9UI33 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC-0.13□□□□□ -2.43
SCN11AQ9UI33 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC-0.13□□□□□ -2.43
SCN11AQ9UI33 BRK1P2-201ENST00000442875 223 ntBASIC-0.13□□□□□ -2.43
SCN11AQ9UI33 IGJP1-201ENST00000522682 475 ntBASIC-0.13□□□□□ -2.43
SCN11AQ9UI33 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC-0.13□□□□□ -2.43
SCN11AQ9UI33 KATNBL1P5-201ENST00000605015 517 ntBASIC-0.13□□□□□ -2.43
SCN11AQ9UI33 NDUFA8P1-201ENST00000605525 367 ntBASIC-0.13□□□□□ -2.43
SCN11AQ9UI33 RNU6-778P-201ENST00000363269 103 ntBASIC-0.14□□□□□ -2.43
SCN11AQ9UI33 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.14□□□□□ -2.43
SCN11AQ9UI33 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC-0.14□□□□□ -2.43
SCN11AQ9UI33 AL669831.1-202ENST00000428504 417 ntBASIC-0.14□□□□□ -2.43
SCN11AQ9UI33 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC-0.14□□□□□ -2.43
SCN11AQ9UI33 PTGES3P1-201ENST00000439531 483 ntBASIC-0.14□□□□□ -2.43
SCN11AQ9UI33 AC016717.1-201ENST00000448918 286 ntBASIC-0.14□□□□□ -2.43
SCN11AQ9UI33 RNU6-333P-201ENST00000459117 107 ntBASIC-0.14□□□□□ -2.43
SCN11AQ9UI33 RPL30P1-201ENST00000488676 339 ntBASIC-0.14□□□□□ -2.43
SCN11AQ9UI33 AC084024.2-201ENST00000503480 791 ntBASIC-0.14□□□□□ -2.43
SCN11AQ9UI33 SNORD79.1-201ENST00000516069 84 ntBASIC-0.14□□□□□ -2.43
SCN11AQ9UI33 RNU5A-4P-201ENST00000516588 111 ntBASIC-0.14□□□□□ -2.43
SCN11AQ9UI33 SUMO2P16-201ENST00000519475 264 ntBASIC-0.14□□□□□ -2.43
SCN11AQ9UI33 MTCO2P15-201ENST00000532655 656 ntBASIC-0.14□□□□□ -2.43
SCN11AQ9UI33 AC026371.1-201ENST00000551867 419 ntBASIC-0.14□□□□□ -2.43
SCN11AQ9UI33 LSM6P2-201ENST00000552208 177 ntBASIC-0.14□□□□□ -2.43
SCN11AQ9UI33 MIR4290-201ENST00000583807 95 ntBASIC-0.14□□□□□ -2.43
SCN11AQ9UI33 AC091152.3-201ENST00000604227 325 ntBASIC-0.14□□□□□ -2.43
SCN11AQ9UI33 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC-0.14□□□□□ -2.43
SCN11AQ9UI33 AC130454.1-201ENST00000622948 401 ntBASIC-0.14□□□□□ -2.43
SCN11AQ9UI33 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC-0.14□□□□□ -2.43
SCN11AQ9UI33 SNORD3E-201ENST00000362899 217 ntBASIC-0.14□□□□□ -2.43
SCN11AQ9UI33 RNA5SP214-201ENST00000363378 118 ntBASIC-0.14□□□□□ -2.43
SCN11AQ9UI33 RNU6-444P-201ENST00000383988 108 ntBASIC-0.14□□□□□ -2.43
SCN11AQ9UI33 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC-0.14□□□□□ -2.43
SCN11AQ9UI33 CCNG1P1-201ENST00000406783 885 ntBASIC-0.14□□□□□ -2.43
SCN11AQ9UI33 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC-0.14□□□□□ -2.43
SCN11AQ9UI33 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC-0.14□□□□□ -2.43
SCN11AQ9UI33 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC-0.14□□□□□ -2.43
SCN11AQ9UI33 AC007919.1-201ENST00000429380 217 ntBASIC-0.14□□□□□ -2.43
SCN11AQ9UI33 RAD1P2-201ENST00000446414 663 ntBASIC-0.14□□□□□ -2.43
SCN11AQ9UI33 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC-0.14□□□□□ -2.43
SCN11AQ9UI33 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC-0.14□□□□□ -2.43
SCN11AQ9UI33 AC060771.1-201ENST00000582031 164 ntBASIC-0.14□□□□□ -2.43
SCN11AQ9UI33 AC009318.4-201ENST00000620496 486 ntBASIC-0.14□□□□□ -2.43
SCN11AQ9UI33 SNORD114-6-201ENST00000364393 72 ntBASIC-0.15□□□□□ -2.43
SCN11AQ9UI33 SNORA51.6-201ENST00000384151 125 ntBASIC-0.15□□□□□ -2.43
SCN11AQ9UI33 Y_RNA.572-201ENST00000384757 98 ntBASIC-0.15□□□□□ -2.43
SCN11AQ9UI33 MT-TQ-201ENST00000387372 72 ntBASIC-0.15□□□□□ -2.43
SCN11AQ9UI33 AL359704.1-201ENST00000411586 781 ntBASIC-0.15□□□□□ -2.43
SCN11AQ9UI33 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC-0.15□□□□□ -2.43
SCN11AQ9UI33 PDCL2P1-201ENST00000419302 352 ntBASIC-0.15□□□□□ -2.43
SCN11AQ9UI33 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC-0.15□□□□□ -2.43
SCN11AQ9UI33 AL031313.1-201ENST00000448435 256 ntBASIC-0.15□□□□□ -2.43
SCN11AQ9UI33 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC-0.15□□□□□ -2.43
SCN11AQ9UI33 AL049874.1-201ENST00000489560 388 ntBASIC-0.15□□□□□ -2.43
SCN11AQ9UI33 COX7A2P2-201ENST00000505291 250 ntBASIC-0.15□□□□□ -2.43
SCN11AQ9UI33 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC-0.15□□□□□ -2.43
SCN11AQ9UI33 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC-0.15□□□□□ -2.43
SCN11AQ9UI33 MIR4275-201ENST00000636486 87 ntBASIC-0.15□□□□□ -2.43
SCN11AQ9UI33 RNU6-950P-201ENST00000384651 107 ntBASIC-0.16□□□□□ -2.43
SCN11AQ9UI33 MTCYBP38-201ENST00000417160 1123 ntBASIC-0.16□□□□□ -2.43
SCN11AQ9UI33 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC-0.16□□□□□ -2.43
SCN11AQ9UI33 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC-0.16□□□□□ -2.43
SCN11AQ9UI33 AC104982.1-201ENST00000478775 574 ntBASIC-0.16□□□□□ -2.43
SCN11AQ9UI33 RNU6-165P-201ENST00000517170 99 ntBASIC-0.16□□□□□ -2.43
SCN11AQ9UI33 ZNF705CP-201ENST00000530515 889 ntBASIC-0.16□□□□□ -2.43
SCN11AQ9UI33 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC-0.16□□□□□ -2.43
SCN11AQ9UI33 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC-0.16□□□□□ -2.43
SCN11AQ9UI33 SNRPGP20-201ENST00000604477 205 ntBASIC-0.16□□□□□ -2.43
SCN11AQ9UI33 AC092354.1-201ENST00000606057 376 ntBASIC-0.16□□□□□ -2.43
SCN11AQ9UI33 AL078595.3-201ENST00000623815 1166 ntBASIC-0.16□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms