Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.55□□□□□ -1.84
USP25Q9UHP3 TOMM20P4-201ENST00000427861 435 ntBASIC3.55□□□□□ -1.84
USP25Q9UHP3 AC097713.2-201ENST00000430199 356 ntBASIC3.55□□□□□ -1.84
USP25Q9UHP3 AL161651.1-201ENST00000440882 223 ntBASIC3.55□□□□□ -1.84
USP25Q9UHP3 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.55□□□□□ -1.84
USP25Q9UHP3 RN7SL293P-201ENST00000481765 281 ntBASIC3.55□□□□□ -1.84
USP25Q9UHP3 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.55□□□□□ -1.84
USP25Q9UHP3 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.55□□□□□ -1.84
USP25Q9UHP3 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.55□□□□□ -1.84
USP25Q9UHP3 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.55□□□□□ -1.84
USP25Q9UHP3 AC023442.1-201ENST00000531247 422 ntBASIC3.55□□□□□ -1.84
USP25Q9UHP3 MIR4680-201ENST00000580906 66 ntBASIC3.55□□□□□ -1.84
USP25Q9UHP3 AC008739.2-201ENST00000597006 317 ntBASIC3.55□□□□□ -1.84
USP25Q9UHP3 AL160281.1-201ENST00000605307 311 ntBASIC3.55□□□□□ -1.84
USP25Q9UHP3 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.55□□□□□ -1.84
USP25Q9UHP3 AC091953.5-201ENST00000622919 233 ntBASIC3.55□□□□□ -1.84
USP25Q9UHP3 AC002064.3-201ENST00000623448 346 ntBASIC3.55□□□□□ -1.84
USP25Q9UHP3 AL078596.1-201ENST00000624856 447 ntBASIC3.55□□□□□ -1.84
USP25Q9UHP3 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
USP25Q9UHP3 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.54□□□□□ -1.84
USP25Q9UHP3 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
USP25Q9UHP3 AC004944.1-201ENST00000517807 3059 ntBASIC3.54□□□□□ -1.84
USP25Q9UHP3 RNU6-384P-201ENST00000364900 104 ntBASIC3.54□□□□□ -1.84
USP25Q9UHP3 RNU6-842P-201ENST00000384269 107 ntBASIC3.54□□□□□ -1.84
USP25Q9UHP3 RNU6-1105P-201ENST00000384774 107 ntBASIC3.54□□□□□ -1.84
USP25Q9UHP3 SNORD73A-201ENST00000386062 65 ntBASIC3.54□□□□□ -1.84
USP25Q9UHP3 MRPL42P3-201ENST00000401492 326 ntBASIC3.54□□□□□ -1.84
USP25Q9UHP3 AL133396.1-201ENST00000432048 687 ntBASIC3.54□□□□□ -1.84
USP25Q9UHP3 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.54□□□□□ -1.84
USP25Q9UHP3 DAP3P1-201ENST00000441522 278 ntBASIC3.54□□□□□ -1.84
USP25Q9UHP3 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.54□□□□□ -1.84
USP25Q9UHP3 RPL21P10-201ENST00000463521 490 ntBASIC3.54□□□□□ -1.84
USP25Q9UHP3 AC008155.2-201ENST00000464337 397 ntBASIC3.54□□□□□ -1.84
USP25Q9UHP3 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.54□□□□□ -1.84
USP25Q9UHP3 AC021146.2-201ENST00000504736 556 ntBASIC3.54□□□□□ -1.84
USP25Q9UHP3 AC113155.1-201ENST00000511141 769 ntBASIC3.54□□□□□ -1.84
USP25Q9UHP3 SNORA25.10-201ENST00000515926 124 ntBASIC3.54□□□□□ -1.84
USP25Q9UHP3 RNU6-1137P-201ENST00000517073 99 ntBASIC3.54□□□□□ -1.84
USP25Q9UHP3 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.54□□□□□ -1.84
USP25Q9UHP3 AC104576.1-201ENST00000524225 88 ntBASIC3.54□□□□□ -1.84
USP25Q9UHP3 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.54□□□□□ -1.84
USP25Q9UHP3 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.54□□□□□ -1.84
USP25Q9UHP3 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.54□□□□□ -1.84
USP25Q9UHP3 AP000787.2-201ENST00000604432 568 ntBASIC3.54□□□□□ -1.84
USP25Q9UHP3 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.54□□□□□ -1.84
USP25Q9UHP3 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.54□□□□□ -1.84
USP25Q9UHP3 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
USP25Q9UHP3 MTND4P1-201ENST00000457501 1466 ntBASIC3.54□□□□□ -1.84
USP25Q9UHP3 AC073346.2-201ENST00000624724 2058 ntBASIC3.53□□□□□ -1.84
USP25Q9UHP3 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
USP25Q9UHP3 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
USP25Q9UHP3 Y_RNA.80-201ENST00000362996 102 ntBASIC3.53□□□□□ -1.84
USP25Q9UHP3 Y_RNA.151-201ENST00000363566 112 ntBASIC3.53□□□□□ -1.84
USP25Q9UHP3 RNU6-1280P-201ENST00000365211 107 ntBASIC3.53□□□□□ -1.84
USP25Q9UHP3 RNU1-115P-201ENST00000365329 160 ntBASIC3.53□□□□□ -1.84
USP25Q9UHP3 Y_RNA.496-201ENST00000384444 101 ntBASIC3.53□□□□□ -1.84
USP25Q9UHP3 MIR491-201ENST00000384877 84 ntBASIC3.53□□□□□ -1.84
USP25Q9UHP3 MIR518D-201ENST00000385014 87 ntBASIC3.53□□□□□ -1.84
USP25Q9UHP3 MIR181B1-201ENST00000385240 110 ntBASIC3.53□□□□□ -1.84
USP25Q9UHP3 AL445529.1-201ENST00000398713 389 ntBASIC3.53□□□□□ -1.84
USP25Q9UHP3 MIR1289-1-201ENST00000408836 144 ntBASIC3.53□□□□□ -1.84
USP25Q9UHP3 RNU6-985P-201ENST00000410182 104 ntBASIC3.53□□□□□ -1.84
USP25Q9UHP3 AL030996.1-201ENST00000411430 235 ntBASIC3.53□□□□□ -1.84
USP25Q9UHP3 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.53□□□□□ -1.84
USP25Q9UHP3 AL096701.2-201ENST00000416920 238 ntBASIC3.53□□□□□ -1.84
USP25Q9UHP3 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC3.53□□□□□ -1.84
USP25Q9UHP3 AC243428.1-201ENST00000421099 264 ntBASIC3.53□□□□□ -1.84
USP25Q9UHP3 AL159987.2-201ENST00000432754 307 ntBASIC3.53□□□□□ -1.84
USP25Q9UHP3 CYCSP35-201ENST00000451978 304 ntBASIC3.53□□□□□ -1.84
USP25Q9UHP3 SCARNA16.2-201ENST00000516520 172 ntBASIC3.53□□□□□ -1.84
USP25Q9UHP3 RNA5SP384-201ENST00000516615 116 ntBASIC3.53□□□□□ -1.84
USP25Q9UHP3 SNORA70.24-201ENST00000517233 118 ntBASIC3.53□□□□□ -1.84
USP25Q9UHP3 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.53□□□□□ -1.84
USP25Q9UHP3 RPL23AP78-201ENST00000599928 470 ntBASIC3.53□□□□□ -1.84
USP25Q9UHP3 AC123912.5-201ENST00000605470 343 ntBASIC3.53□□□□□ -1.84
USP25Q9UHP3 MIR622-201ENST00000638396 96 ntBASIC3.53□□□□□ -1.84
USP25Q9UHP3 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
USP25Q9UHP3 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.53□□□□□ -1.84
USP25Q9UHP3 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
USP25Q9UHP3 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
USP25Q9UHP3 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
USP25Q9UHP3 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
USP25Q9UHP3 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
USP25Q9UHP3 RNU6-1059P-201ENST00000363752 98 ntBASIC3.52□□□□□ -1.85
USP25Q9UHP3 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
USP25Q9UHP3 RNU6-463P-201ENST00000384340 107 ntBASIC3.52□□□□□ -1.85
USP25Q9UHP3 RNY1P14-201ENST00000384426 108 ntBASIC3.52□□□□□ -1.85
USP25Q9UHP3 MIR183-201ENST00000384958 110 ntBASIC3.52□□□□□ -1.85
USP25Q9UHP3 U3.37-201ENST00000408528 213 ntBASIC3.52□□□□□ -1.85
USP25Q9UHP3 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.52□□□□□ -1.85
USP25Q9UHP3 AC008267.5-201ENST00000424928 265 ntBASIC3.52□□□□□ -1.85
USP25Q9UHP3 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.52□□□□□ -1.85
USP25Q9UHP3 PCMTD1P1-201ENST00000455560 355 ntBASIC3.52□□□□□ -1.85
USP25Q9UHP3 RN7SL601P-201ENST00000471221 293 ntBASIC3.52□□□□□ -1.85
USP25Q9UHP3 AC109925.1-201ENST00000478069 331 ntBASIC3.52□□□□□ -1.85
USP25Q9UHP3 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.52□□□□□ -1.85
USP25Q9UHP3 AC116655.1-201ENST00000508324 901 ntBASIC3.52□□□□□ -1.85
USP25Q9UHP3 RNU6-581P-201ENST00000516214 105 ntBASIC3.52□□□□□ -1.85
USP25Q9UHP3 RNU6-699P-201ENST00000517081 110 ntBASIC3.52□□□□□ -1.85
USP25Q9UHP3 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms