Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 AC005668.1-201ENST00000571142 476 ntBASIC0.69□□□□□ -2.3
PHRF1Q9P1Y6 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.69□□□□□ -2.3
PHRF1Q9P1Y6 CLIC4P2-201ENST00000601934 717 ntBASIC0.69□□□□□ -2.3
PHRF1Q9P1Y6 RPL21P136-201ENST00000605378 396 ntBASIC0.69□□□□□ -2.3
PHRF1Q9P1Y6 AC069545.1-201ENST00000605671 358 ntBASIC0.69□□□□□ -2.3
PHRF1Q9P1Y6 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.69□□□□□ -2.3
PHRF1Q9P1Y6 AL121890.5-201ENST00000620848 304 ntBASIC0.69□□□□□ -2.3
PHRF1Q9P1Y6 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.69□□□□□ -2.3
PHRF1Q9P1Y6 AC093648.1-201ENST00000623546 606 ntBASIC0.69□□□□□ -2.3
PHRF1Q9P1Y6 MIR424-201ENST00000362227 98 ntBASIC0.68□□□□□ -2.3
PHRF1Q9P1Y6 RNU6-1210P-201ENST00000363775 107 ntBASIC0.68□□□□□ -2.3
PHRF1Q9P1Y6 RNU6-609P-201ENST00000365459 107 ntBASIC0.68□□□□□ -2.3
PHRF1Q9P1Y6 Y_RNA.471-201ENST00000384312 102 ntBASIC0.68□□□□□ -2.3
PHRF1Q9P1Y6 MIR92A1-201ENST00000385233 78 ntBASIC0.68□□□□□ -2.3
PHRF1Q9P1Y6 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC0.68□□□□□ -2.3
PHRF1Q9P1Y6 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC0.68□□□□□ -2.3
PHRF1Q9P1Y6 AC108729.1-201ENST00000487812 947 ntBASIC0.68□□□□□ -2.3
PHRF1Q9P1Y6 AC099513.1-201ENST00000490423 301 ntBASIC0.68□□□□□ -2.3
PHRF1Q9P1Y6 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC0.68□□□□□ -2.3
PHRF1Q9P1Y6 MTCYBP40-201ENST00000509390 1135 ntBASIC0.68□□□□□ -2.3
PHRF1Q9P1Y6 RNU6-322P-201ENST00000516010 103 ntBASIC0.68□□□□□ -2.3
PHRF1Q9P1Y6 RNU6-667P-201ENST00000517186 102 ntBASIC0.68□□□□□ -2.3
PHRF1Q9P1Y6 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.68□□□□□ -2.3
PHRF1Q9P1Y6 AC060771.1-201ENST00000582031 164 ntBASIC0.68□□□□□ -2.3
PHRF1Q9P1Y6 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC0.68□□□□□ -2.3
PHRF1Q9P1Y6 RNU6-1010P-201ENST00000362757 107 ntBASIC0.67□□□□□ -2.3
PHRF1Q9P1Y6 SNORD33-201ENST00000362761 85 ntBASIC0.67□□□□□ -2.3
PHRF1Q9P1Y6 SNORD115-3-201ENST00000363100 82 ntBASIC0.67□□□□□ -2.3
PHRF1Q9P1Y6 snoZ40.1-201ENST00000364540 72 ntBASIC0.67□□□□□ -2.3
PHRF1Q9P1Y6 SNORA4.3-201ENST00000365564 137 ntBASIC0.67□□□□□ -2.3
PHRF1Q9P1Y6 RNU6-701P-201ENST00000384059 107 ntBASIC0.67□□□□□ -2.3
PHRF1Q9P1Y6 RNU6-160P-201ENST00000384591 107 ntBASIC0.67□□□□□ -2.3
PHRF1Q9P1Y6 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
PHRF1Q9P1Y6 CBX3P9-201ENST00000402326 552 ntBASIC0.67□□□□□ -2.3
PHRF1Q9P1Y6 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC0.67□□□□□ -2.3
PHRF1Q9P1Y6 RPL37P10-201ENST00000412884 288 ntBASIC0.67□□□□□ -2.3
PHRF1Q9P1Y6 AC009518.2-201ENST00000418056 731 ntBASIC0.67□□□□□ -2.3
PHRF1Q9P1Y6 AC010153.1-201ENST00000432862 727 ntBASIC0.67□□□□□ -2.3
PHRF1Q9P1Y6 MTND4P25-201ENST00000441039 533 ntBASIC0.67□□□□□ -2.3
PHRF1Q9P1Y6 PAXBP1P1-201ENST00000449315 447 ntBASIC0.67□□□□□ -2.3
PHRF1Q9P1Y6 AC010409.1-201ENST00000487382 476 ntBASIC0.67□□□□□ -2.3
PHRF1Q9P1Y6 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.67□□□□□ -2.3
PHRF1Q9P1Y6 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC0.67□□□□□ -2.3
PHRF1Q9P1Y6 MTCYBP43-201ENST00000513621 740 ntBASIC0.67□□□□□ -2.3
PHRF1Q9P1Y6 AC009902.1-201ENST00000519351 183 ntBASIC0.67□□□□□ -2.3
PHRF1Q9P1Y6 COPS8P3-201ENST00000526024 482 ntBASIC0.67□□□□□ -2.3
PHRF1Q9P1Y6 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.67□□□□□ -2.3
PHRF1Q9P1Y6 AL132657.2-201ENST00000564417 358 ntBASIC0.67□□□□□ -2.3
PHRF1Q9P1Y6 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC0.67□□□□□ -2.3
PHRF1Q9P1Y6 MIR1273C-201ENST00000578669 77 ntBASIC0.67□□□□□ -2.3
PHRF1Q9P1Y6 BNIP3P26-201ENST00000600827 554 ntBASIC0.67□□□□□ -2.3
PHRF1Q9P1Y6 AC098483.2-201ENST00000603158 454 ntBASIC0.67□□□□□ -2.3
PHRF1Q9P1Y6 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.67□□□□□ -2.3
PHRF1Q9P1Y6 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC0.67□□□□□ -2.3
PHRF1Q9P1Y6 AC245060.5-201ENST00000610778 3293 ntBASIC0.67□□□□□ -2.3
PHRF1Q9P1Y6 MTND5P33-201ENST00000571250 1450 ntBASIC0.67□□□□□ -2.3
PHRF1Q9P1Y6 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.67□□□□□ -2.3
PHRF1Q9P1Y6 RNU6-858P-201ENST00000362436 107 ntBASIC0.67□□□□□ -2.3
PHRF1Q9P1Y6 RNU6-271P-201ENST00000363858 105 ntBASIC0.67□□□□□ -2.3
PHRF1Q9P1Y6 SNORD114-6-201ENST00000364393 72 ntBASIC0.67□□□□□ -2.3
PHRF1Q9P1Y6 RNU6-744P-201ENST00000365557 107 ntBASIC0.67□□□□□ -2.3
PHRF1Q9P1Y6 RNU6-1316P-201ENST00000384242 108 ntBASIC0.67□□□□□ -2.3
PHRF1Q9P1Y6 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
PHRF1Q9P1Y6 AL133475.1-201ENST00000404414 305 ntBASIC0.67□□□□□ -2.3
PHRF1Q9P1Y6 AC068533.2-201ENST00000411872 306 ntBASIC0.67□□□□□ -2.3
PHRF1Q9P1Y6 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC0.67□□□□□ -2.3
PHRF1Q9P1Y6 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC0.67□□□□□ -2.3
PHRF1Q9P1Y6 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC0.67□□□□□ -2.3
PHRF1Q9P1Y6 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC0.67□□□□□ -2.3
PHRF1Q9P1Y6 SNRPEP7-201ENST00000438350 220 ntBASIC0.67□□□□□ -2.3
PHRF1Q9P1Y6 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC0.67□□□□□ -2.3
PHRF1Q9P1Y6 AC021451.1-201ENST00000523498 1129 ntBASIC0.67□□□□□ -2.3
PHRF1Q9P1Y6 DEFB108A-201ENST00000530110 222 ntBASIC0.67□□□□□ -2.3
PHRF1Q9P1Y6 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC0.67□□□□□ -2.3
PHRF1Q9P1Y6 MIR4514-201ENST00000581410 57 ntBASIC0.67□□□□□ -2.3
PHRF1Q9P1Y6 AC124016.2-201ENST00000610058 665 ntBASIC0.67□□□□□ -2.3
PHRF1Q9P1Y6 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
PHRF1Q9P1Y6 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.66□□□□□ -2.3
PHRF1Q9P1Y6 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
PHRF1Q9P1Y6 RNU6-289P-201ENST00000364093 107 ntBASIC0.66□□□□□ -2.3
PHRF1Q9P1Y6 Y_RNA.255-201ENST00000364581 97 ntBASIC0.66□□□□□ -2.3
PHRF1Q9P1Y6 RNU6-166P-201ENST00000384371 107 ntBASIC0.66□□□□□ -2.3
PHRF1Q9P1Y6 MIR19A-201ENST00000384878 82 ntBASIC0.66□□□□□ -2.3
PHRF1Q9P1Y6 RNA5SP63-201ENST00000391225 112 ntBASIC0.66□□□□□ -2.3
PHRF1Q9P1Y6 RNU2-36P-201ENST00000410361 191 ntBASIC0.66□□□□□ -2.3
PHRF1Q9P1Y6 RNU2-23P-201ENST00000410545 195 ntBASIC0.66□□□□□ -2.3
PHRF1Q9P1Y6 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC0.66□□□□□ -2.3
PHRF1Q9P1Y6 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC0.66□□□□□ -2.3
PHRF1Q9P1Y6 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.66□□□□□ -2.3
PHRF1Q9P1Y6 RPL30P7-201ENST00000479312 323 ntBASIC0.66□□□□□ -2.3
PHRF1Q9P1Y6 HMGN1P13-201ENST00000505795 138 ntBASIC0.66□□□□□ -2.3
PHRF1Q9P1Y6 AC093259.1-201ENST00000509755 300 ntBASIC0.66□□□□□ -2.3
PHRF1Q9P1Y6 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC0.66□□□□□ -2.3
PHRF1Q9P1Y6 SNORA31.17-201ENST00000516953 127 ntBASIC0.66□□□□□ -2.3
PHRF1Q9P1Y6 RNA5SP404-201ENST00000517118 132 ntBASIC0.66□□□□□ -2.3
PHRF1Q9P1Y6 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.66□□□□□ -2.3
PHRF1Q9P1Y6 OR8K2P-201ENST00000524645 927 ntBASIC0.66□□□□□ -2.3
PHRF1Q9P1Y6 AC087897.1-201ENST00000550134 156 ntBASIC0.66□□□□□ -2.3
PHRF1Q9P1Y6 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC0.66□□□□□ -2.3
PHRF1Q9P1Y6 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms