Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 MIR5692A1-201ENST00000580523 69 ntBASIC1.71□□□□□ -2.14
KLHL28Q9NXS3 MIR4713-201ENST00000582691 75 ntBASIC1.71□□□□□ -2.14
KLHL28Q9NXS3 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.71□□□□□ -2.14
KLHL28Q9NXS3 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.71□□□□□ -2.14
KLHL28Q9NXS3 AC091834.1-201ENST00000614543 472 ntBASIC1.71□□□□□ -2.14
KLHL28Q9NXS3 RMST_4.1-201ENST00000616886 107 ntBASIC1.71□□□□□ -2.14
KLHL28Q9NXS3 AC019226.2-201ENST00000625973 424 ntBASIC1.71□□□□□ -2.14
KLHL28Q9NXS3 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
KLHL28Q9NXS3 RNY1P12-201ENST00000364251 105 ntBASIC1.7□□□□□ -2.14
KLHL28Q9NXS3 RNU11-3P-201ENST00000391111 133 ntBASIC1.7□□□□□ -2.14
KLHL28Q9NXS3 Z99497.1-201ENST00000421282 135 ntBASIC1.7□□□□□ -2.14
KLHL28Q9NXS3 RPL30P12-201ENST00000474666 353 ntBASIC1.7□□□□□ -2.14
KLHL28Q9NXS3 RPL30P1-201ENST00000488676 339 ntBASIC1.7□□□□□ -2.14
KLHL28Q9NXS3 AC106038.2-201ENST00000520706 568 ntBASIC1.7□□□□□ -2.14
KLHL28Q9NXS3 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.7□□□□□ -2.14
KLHL28Q9NXS3 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.7□□□□□ -2.14
KLHL28Q9NXS3 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.7□□□□□ -2.14
KLHL28Q9NXS3 MIR3618-201ENST00000580330 88 ntBASIC1.7□□□□□ -2.14
KLHL28Q9NXS3 AC078795.2-201ENST00000602835 1252 ntBASIC1.7□□□□□ -2.14
KLHL28Q9NXS3 AL136363.2-201ENST00000604173 851 ntBASIC1.7□□□□□ -2.14
KLHL28Q9NXS3 AC092354.1-201ENST00000606057 376 ntBASIC1.7□□□□□ -2.14
KLHL28Q9NXS3 AC091304.9-201ENST00000612091 226 ntBASIC1.7□□□□□ -2.14
KLHL28Q9NXS3 AL359740.1-201ENST00000624340 592 ntBASIC1.7□□□□□ -2.14
KLHL28Q9NXS3 AC120349.3-201ENST00000624377 529 ntBASIC1.7□□□□□ -2.14
KLHL28Q9NXS3 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.69□□□□□ -2.14
KLHL28Q9NXS3 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
KLHL28Q9NXS3 snoU2_19.1-201ENST00000362361 80 ntBASIC1.69□□□□□ -2.14
KLHL28Q9NXS3 RNU6-78P-201ENST00000362897 107 ntBASIC1.69□□□□□ -2.14
KLHL28Q9NXS3 RNU6-179P-201ENST00000363350 107 ntBASIC1.69□□□□□ -2.14
KLHL28Q9NXS3 Y_RNA.140-201ENST00000363474 103 ntBASIC1.69□□□□□ -2.14
KLHL28Q9NXS3 SNORA20.2-201ENST00000383922 131 ntBASIC1.69□□□□□ -2.14
KLHL28Q9NXS3 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.69□□□□□ -2.14
KLHL28Q9NXS3 EIF4EP2-201ENST00000422816 654 ntBASIC1.69□□□□□ -2.14
KLHL28Q9NXS3 AL365203.2-201ENST00000423444 196 ntBASIC1.69□□□□□ -2.14
KLHL28Q9NXS3 MTATP6P16-201ENST00000434543 526 ntBASIC1.69□□□□□ -2.14
KLHL28Q9NXS3 AC003989.2-201ENST00000440224 169 ntBASIC1.69□□□□□ -2.14
KLHL28Q9NXS3 MTND1P30-201ENST00000441241 901 ntBASIC1.69□□□□□ -2.14
KLHL28Q9NXS3 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC1.69□□□□□ -2.14
KLHL28Q9NXS3 RAP1BP2-201ENST00000478270 544 ntBASIC1.69□□□□□ -2.14
KLHL28Q9NXS3 AC010486.2-201ENST00000505572 483 ntBASIC1.69□□□□□ -2.14
KLHL28Q9NXS3 MTCYBP40-201ENST00000509390 1135 ntBASIC1.69□□□□□ -2.14
KLHL28Q9NXS3 RNU6-991P-201ENST00000516168 107 ntBASIC1.69□□□□□ -2.14
KLHL28Q9NXS3 RNA5SP458-201ENST00000516188 119 ntBASIC1.69□□□□□ -2.14
KLHL28Q9NXS3 RNU6-965P-201ENST00000516721 96 ntBASIC1.69□□□□□ -2.14
KLHL28Q9NXS3 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.69□□□□□ -2.14
KLHL28Q9NXS3 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.69□□□□□ -2.14
KLHL28Q9NXS3 AC022254.1-201ENST00000567857 235 ntBASIC1.69□□□□□ -2.14
KLHL28Q9NXS3 AC005771.1-201ENST00000585581 349 ntBASIC1.69□□□□□ -2.14
KLHL28Q9NXS3 AL121992.2-201ENST00000606262 256 ntBASIC1.69□□□□□ -2.14
KLHL28Q9NXS3 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC1.69□□□□□ -2.14
KLHL28Q9NXS3 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.69□□□□□ -2.14
KLHL28Q9NXS3 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.69□□□□□ -2.14
KLHL28Q9NXS3 RNU1-17P-201ENST00000363022 152 ntBASIC1.68□□□□□ -2.14
KLHL28Q9NXS3 RNU6-1164P-201ENST00000364428 107 ntBASIC1.68□□□□□ -2.14
KLHL28Q9NXS3 RNU4-42P-201ENST00000364738 142 ntBASIC1.68□□□□□ -2.14
KLHL28Q9NXS3 RNU6-234P-201ENST00000365229 104 ntBASIC1.68□□□□□ -2.14
KLHL28Q9NXS3 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC1.68□□□□□ -2.14
KLHL28Q9NXS3 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
KLHL28Q9NXS3 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.68□□□□□ -2.14
KLHL28Q9NXS3 Y_RNA.598-201ENST00000410480 95 ntBASIC1.68□□□□□ -2.14
KLHL28Q9NXS3 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.68□□□□□ -2.14
KLHL28Q9NXS3 AC007969.2-201ENST00000441891 191 ntBASIC1.68□□□□□ -2.14
KLHL28Q9NXS3 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.68□□□□□ -2.14
KLHL28Q9NXS3 AC116562.3-201ENST00000506136 177 ntBASIC1.68□□□□□ -2.14
KLHL28Q9NXS3 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.68□□□□□ -2.14
KLHL28Q9NXS3 FABP5P5-201ENST00000515537 406 ntBASIC1.68□□□□□ -2.14
KLHL28Q9NXS3 RNA5SP182-201ENST00000516064 82 ntBASIC1.68□□□□□ -2.14
KLHL28Q9NXS3 SCARNA24.1-201ENST00000516465 137 ntBASIC1.68□□□□□ -2.14
KLHL28Q9NXS3 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.68□□□□□ -2.14
KLHL28Q9NXS3 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.68□□□□□ -2.14
KLHL28Q9NXS3 AC060788.1-201ENST00000521318 469 ntBASIC1.68□□□□□ -2.14
KLHL28Q9NXS3 AP005660.1-201ENST00000522972 293 ntBASIC1.68□□□□□ -2.14
KLHL28Q9NXS3 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.68□□□□□ -2.14
KLHL28Q9NXS3 AC068587.5-201ENST00000528506 175 ntBASIC1.68□□□□□ -2.14
KLHL28Q9NXS3 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.68□□□□□ -2.14
KLHL28Q9NXS3 AL158211.1-201ENST00000566763 763 ntBASIC1.68□□□□□ -2.14
KLHL28Q9NXS3 MIR4419B-201ENST00000577260 68 ntBASIC1.68□□□□□ -2.14
KLHL28Q9NXS3 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.68□□□□□ -2.14
KLHL28Q9NXS3 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.68□□□□□ -2.14
KLHL28Q9NXS3 U1.36-201ENST00000620684 176 ntBASIC1.68□□□□□ -2.14
KLHL28Q9NXS3 AC138649.3-201ENST00000622154 254 ntBASIC1.68□□□□□ -2.14
KLHL28Q9NXS3 AP000770.2-201ENST00000623694 100 ntBASIC1.68□□□□□ -2.14
KLHL28Q9NXS3 ANKRD20A17P-201ENST00000511745 1330 ntBASIC1.67□□□□□ -2.14
KLHL28Q9NXS3 RNU1-58P-201ENST00000362413 163 ntBASIC1.67□□□□□ -2.14
KLHL28Q9NXS3 RNU4-21P-201ENST00000362802 126 ntBASIC1.67□□□□□ -2.14
KLHL28Q9NXS3 RNU6-169P-201ENST00000365336 107 ntBASIC1.67□□□□□ -2.14
KLHL28Q9NXS3 Y_RNA.576-201ENST00000384781 102 ntBASIC1.67□□□□□ -2.14
KLHL28Q9NXS3 RNA5SP213-201ENST00000391031 106 ntBASIC1.67□□□□□ -2.14
KLHL28Q9NXS3 RNU2-3P-201ENST00000410144 191 ntBASIC1.67□□□□□ -2.14
KLHL28Q9NXS3 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.67□□□□□ -2.14
KLHL28Q9NXS3 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.67□□□□□ -2.14
KLHL28Q9NXS3 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.67□□□□□ -2.14
KLHL28Q9NXS3 CYCSP46-201ENST00000423569 204 ntBASIC1.67□□□□□ -2.14
KLHL28Q9NXS3 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.67□□□□□ -2.14
KLHL28Q9NXS3 UBE2V1P4-201ENST00000425374 344 ntBASIC1.67□□□□□ -2.14
KLHL28Q9NXS3 RPS15AP10-201ENST00000432472 382 ntBASIC1.67□□□□□ -2.14
KLHL28Q9NXS3 AC000111.3-201ENST00000433478 193 ntBASIC1.67□□□□□ -2.14
KLHL28Q9NXS3 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.67□□□□□ -2.14
KLHL28Q9NXS3 AC104850.1-201ENST00000435940 476 ntBASIC1.67□□□□□ -2.14
KLHL28Q9NXS3 IFNA20P-201ENST00000436840 528 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 165.1 ms