Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 RNU6-160P-201ENST00000384591 107 ntBASIC1.43□□□□□ -2.18
CLN6Q9NWW5 RNU2-3P-201ENST00000410144 191 ntBASIC1.43□□□□□ -2.18
CLN6Q9NWW5 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.43□□□□□ -2.18
CLN6Q9NWW5 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.43□□□□□ -2.18
CLN6Q9NWW5 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.43□□□□□ -2.18
CLN6Q9NWW5 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC1.43□□□□□ -2.18
CLN6Q9NWW5 AC073614.1-201ENST00000438690 650 ntBASIC1.43□□□□□ -2.18
CLN6Q9NWW5 ZNF736P12Y-201ENST00000443152 1243 ntBASIC1.43□□□□□ -2.18
CLN6Q9NWW5 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.43□□□□□ -2.18
CLN6Q9NWW5 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.43□□□□□ -2.18
CLN6Q9NWW5 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.43□□□□□ -2.18
CLN6Q9NWW5 RNU5F-2P-201ENST00000516066 82 ntBASIC1.43□□□□□ -2.18
CLN6Q9NWW5 RNU2-46P-201ENST00000517038 113 ntBASIC1.43□□□□□ -2.18
CLN6Q9NWW5 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.43□□□□□ -2.18
CLN6Q9NWW5 AC103987.3-201ENST00000582071 292 ntBASIC1.43□□□□□ -2.18
CLN6Q9NWW5 BNIP3P8-201ENST00000597863 560 ntBASIC1.43□□□□□ -2.18
CLN6Q9NWW5 AC234772.3-201ENST00000602277 528 ntBASIC1.43□□□□□ -2.18
CLN6Q9NWW5 U4.7-201ENST00000638126 106 ntBASIC1.43□□□□□ -2.18
CLN6Q9NWW5 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.43□□□□□ -2.18
CLN6Q9NWW5 AC233981.2-201ENST00000611524 1614 ntBASIC1.43□□□□□ -2.18
CLN6Q9NWW5 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.43□□□□□ -2.18
CLN6Q9NWW5 U8.2-201ENST00000363156 134 ntBASIC1.42□□□□□ -2.18
CLN6Q9NWW5 SNORA62.1-201ENST00000364287 154 ntBASIC1.42□□□□□ -2.18
CLN6Q9NWW5 RNY4P34-201ENST00000364779 95 ntBASIC1.42□□□□□ -2.18
CLN6Q9NWW5 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
CLN6Q9NWW5 SNORA48.1-201ENST00000390879 135 ntBASIC1.42□□□□□ -2.18
CLN6Q9NWW5 AL357139.1-201ENST00000407792 426 ntBASIC1.42□□□□□ -2.18
CLN6Q9NWW5 KATNBL1P3-201ENST00000443475 909 ntBASIC1.42□□□□□ -2.18
CLN6Q9NWW5 AL035666.1-201ENST00000446195 348 ntBASIC1.42□□□□□ -2.18
CLN6Q9NWW5 SNRPFP4-201ENST00000456366 242 ntBASIC1.42□□□□□ -2.18
CLN6Q9NWW5 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC1.42□□□□□ -2.18
CLN6Q9NWW5 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.42□□□□□ -2.18
CLN6Q9NWW5 AC005178.1-201ENST00000508392 440 ntBASIC1.42□□□□□ -2.18
CLN6Q9NWW5 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC1.42□□□□□ -2.18
CLN6Q9NWW5 Y_RNA.675-201ENST00000516389 149 ntBASIC1.42□□□□□ -2.18
CLN6Q9NWW5 RNU6-250P-201ENST00000516958 103 ntBASIC1.42□□□□□ -2.18
CLN6Q9NWW5 RNU6-410P-201ENST00000517006 107 ntBASIC1.42□□□□□ -2.18
CLN6Q9NWW5 AL356057.1-201ENST00000533798 831 ntBASIC1.42□□□□□ -2.18
CLN6Q9NWW5 TRAV32-201ENST00000553993 340 ntBASIC1.42□□□□□ -2.18
CLN6Q9NWW5 MIR4255-201ENST00000579351 72 ntBASIC1.42□□□□□ -2.18
CLN6Q9NWW5 AC025754.2-201ENST00000606491 432 ntBASIC1.42□□□□□ -2.18
CLN6Q9NWW5 AC116312.1-201ENST00000606841 314 ntBASIC1.42□□□□□ -2.18
CLN6Q9NWW5 AL136370.1-201ENST00000608166 691 ntBASIC1.42□□□□□ -2.18
CLN6Q9NWW5 MIR6852-201ENST00000621699 66 ntBASIC1.42□□□□□ -2.18
CLN6Q9NWW5 Z69720.2-201ENST00000624755 279 ntBASIC1.42□□□□□ -2.18
CLN6Q9NWW5 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
CLN6Q9NWW5 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.42□□□□□ -2.18
CLN6Q9NWW5 MTND5P17-201ENST00000418405 1603 ntBASIC1.41□□□□□ -2.18
CLN6Q9NWW5 RNU6-1287P-201ENST00000362914 107 ntBASIC1.41□□□□□ -2.18
CLN6Q9NWW5 RNU1-42P-201ENST00000364033 160 ntBASIC1.41□□□□□ -2.18
CLN6Q9NWW5 Y_RNA.367-201ENST00000365544 101 ntBASIC1.41□□□□□ -2.18
CLN6Q9NWW5 RNU6-1060P-201ENST00000384664 107 ntBASIC1.41□□□□□ -2.18
CLN6Q9NWW5 MIR634-201ENST00000385208 97 ntBASIC1.41□□□□□ -2.18
CLN6Q9NWW5 MIR320A-201ENST00000385302 82 ntBASIC1.41□□□□□ -2.18
CLN6Q9NWW5 CYCSP33-201ENST00000414485 327 ntBASIC1.41□□□□□ -2.18
CLN6Q9NWW5 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.41□□□□□ -2.18
CLN6Q9NWW5 AC007098.1-201ENST00000420122 367 ntBASIC1.41□□□□□ -2.18
CLN6Q9NWW5 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC1.41□□□□□ -2.18
CLN6Q9NWW5 AC104564.1-201ENST00000493028 407 ntBASIC1.41□□□□□ -2.18
CLN6Q9NWW5 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.41□□□□□ -2.18
CLN6Q9NWW5 AC090572.1-201ENST00000519251 160 ntBASIC1.41□□□□□ -2.18
CLN6Q9NWW5 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.41□□□□□ -2.18
CLN6Q9NWW5 AC087883.1-201ENST00000551882 391 ntBASIC1.41□□□□□ -2.18
CLN6Q9NWW5 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.41□□□□□ -2.18
CLN6Q9NWW5 MIR548AB-201ENST00000584917 84 ntBASIC1.41□□□□□ -2.18
CLN6Q9NWW5 AC098848.2-201ENST00000588023 330 ntBASIC1.41□□□□□ -2.18
CLN6Q9NWW5 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.41□□□□□ -2.18
CLN6Q9NWW5 AL034555.1-201ENST00000604816 211 ntBASIC1.41□□□□□ -2.18
CLN6Q9NWW5 AC090578.1-201ENST00000604955 591 ntBASIC1.41□□□□□ -2.18
CLN6Q9NWW5 AC016925.2-201ENST00000605108 242 ntBASIC1.41□□□□□ -2.18
CLN6Q9NWW5 AC092354.1-201ENST00000606057 376 ntBASIC1.41□□□□□ -2.18
CLN6Q9NWW5 MIR502-201ENST00000606349 86 ntBASIC1.41□□□□□ -2.18
CLN6Q9NWW5 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.41□□□□□ -2.18
CLN6Q9NWW5 AC009318.2-201ENST00000610917 651 ntBASIC1.41□□□□□ -2.18
CLN6Q9NWW5 AL050303.3-201ENST00000613704 284 ntBASIC1.41□□□□□ -2.18
CLN6Q9NWW5 ZNF680P1-201ENST00000436625 1469 ntBASIC1.41□□□□□ -2.18
CLN6Q9NWW5 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.41□□□□□ -2.18
CLN6Q9NWW5 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
CLN6Q9NWW5 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
CLN6Q9NWW5 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.4□□□□□ -2.18
CLN6Q9NWW5 MTND4P4-201ENST00000439033 1366 ntBASIC1.4□□□□□ -2.19
CLN6Q9NWW5 MTND4P23-201ENST00000447723 1363 ntBASIC1.4□□□□□ -2.19
CLN6Q9NWW5 U8.3-201ENST00000363321 132 ntBASIC1.4□□□□□ -2.19
CLN6Q9NWW5 RNU6-105P-201ENST00000363909 104 ntBASIC1.4□□□□□ -2.19
CLN6Q9NWW5 RNA5SP493-201ENST00000364115 91 ntBASIC1.4□□□□□ -2.19
CLN6Q9NWW5 Y_RNA.560-201ENST00000384689 102 ntBASIC1.4□□□□□ -2.19
CLN6Q9NWW5 MIR30A-201ENST00000385092 71 ntBASIC1.4□□□□□ -2.19
CLN6Q9NWW5 RNU6-550P-201ENST00000391057 101 ntBASIC1.4□□□□□ -2.19
CLN6Q9NWW5 MIR1304-201ENST00000408243 91 ntBASIC1.4□□□□□ -2.19
CLN6Q9NWW5 RNU4-26P-201ENST00000410270 107 ntBASIC1.4□□□□□ -2.19
CLN6Q9NWW5 HIGD1AP15-201ENST00000416198 280 ntBASIC1.4□□□□□ -2.19
CLN6Q9NWW5 Z99497.1-201ENST00000421282 135 ntBASIC1.4□□□□□ -2.19
CLN6Q9NWW5 MTND1P30-201ENST00000441241 901 ntBASIC1.4□□□□□ -2.19
CLN6Q9NWW5 HMGN2P23-201ENST00000456759 269 ntBASIC1.4□□□□□ -2.19
CLN6Q9NWW5 SNRPGP7-201ENST00000469016 106 ntBASIC1.4□□□□□ -2.19
CLN6Q9NWW5 RPS29P21-201ENST00000496272 170 ntBASIC1.4□□□□□ -2.19
CLN6Q9NWW5 AC021146.2-201ENST00000504736 556 ntBASIC1.4□□□□□ -2.19
CLN6Q9NWW5 AC104136.1-201ENST00000512969 394 ntBASIC1.4□□□□□ -2.19
CLN6Q9NWW5 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.4□□□□□ -2.19
CLN6Q9NWW5 RNU6-377P-201ENST00000515965 102 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 152.8 ms