Protein–RNA interactions for Protein: Q9NUS5

AP5S1, AP-5 complex subunit sigma-1, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP5S1Q9NUS5 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
AP5S1Q9NUS5 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
AP5S1Q9NUS5 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.41□□□□□ -1.86
AP5S1Q9NUS5 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.4□□□□□ -1.86
AP5S1Q9NUS5 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
AP5S1Q9NUS5 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.86
AP5S1Q9NUS5 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
AP5S1Q9NUS5 AL590240.1-201ENST00000334118 313 ntBASIC3.4□□□□□ -1.87
AP5S1Q9NUS5 RNU1-75P-201ENST00000347264 129 ntBASIC3.4□□□□□ -1.87
AP5S1Q9NUS5 Y_RNA.8-201ENST00000362353 102 ntBASIC3.4□□□□□ -1.87
AP5S1Q9NUS5 RNU6-1210P-201ENST00000363775 107 ntBASIC3.4□□□□□ -1.87
AP5S1Q9NUS5 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.4□□□□□ -1.87
AP5S1Q9NUS5 Y_RNA.398-201ENST00000383952 99 ntBASIC3.4□□□□□ -1.87
AP5S1Q9NUS5 Y_RNA.571-201ENST00000384753 98 ntBASIC3.4□□□□□ -1.87
AP5S1Q9NUS5 MIR186-201ENST00000384988 86 ntBASIC3.4□□□□□ -1.87
AP5S1Q9NUS5 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
AP5S1Q9NUS5 U3.40-201ENST00000408706 208 ntBASIC3.4□□□□□ -1.87
AP5S1Q9NUS5 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.4□□□□□ -1.87
AP5S1Q9NUS5 HLA-N-201ENST00000437516 135 ntBASIC3.4□□□□□ -1.87
AP5S1Q9NUS5 SCARNA10-201ENST00000459255 330 ntBASIC3.4□□□□□ -1.87
AP5S1Q9NUS5 RPL31P41-201ENST00000477967 372 ntBASIC3.4□□□□□ -1.87
AP5S1Q9NUS5 SNRPCP2-201ENST00000504370 475 ntBASIC3.4□□□□□ -1.87
AP5S1Q9NUS5 DEFB131C-201ENST00000528817 165 ntBASIC3.4□□□□□ -1.87
AP5S1Q9NUS5 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.4□□□□□ -1.87
AP5S1Q9NUS5 AC025281.1-201ENST00000567026 265 ntBASIC3.4□□□□□ -1.87
AP5S1Q9NUS5 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC3.4□□□□□ -1.87
AP5S1Q9NUS5 AC004832.4-201ENST00000608952 331 ntBASIC3.4□□□□□ -1.87
AP5S1Q9NUS5 AC068205.3-201ENST00000636385 468 ntBASIC3.4□□□□□ -1.87
AP5S1Q9NUS5 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
AP5S1Q9NUS5 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
AP5S1Q9NUS5 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
AP5S1Q9NUS5 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.4□□□□□ -1.87
AP5S1Q9NUS5 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.87
AP5S1Q9NUS5 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
AP5S1Q9NUS5 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
AP5S1Q9NUS5 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.39□□□□□ -1.87
AP5S1Q9NUS5 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.39□□□□□ -1.87
AP5S1Q9NUS5 RNU1-15P-201ENST00000353977 144 ntBASIC3.39□□□□□ -1.87
AP5S1Q9NUS5 RNU6-655P-201ENST00000362858 107 ntBASIC3.39□□□□□ -1.87
AP5S1Q9NUS5 RN7SKP103-201ENST00000363848 320 ntBASIC3.39□□□□□ -1.87
AP5S1Q9NUS5 U3.39-201ENST00000408569 239 ntBASIC3.39□□□□□ -1.87
AP5S1Q9NUS5 RNA5SP39-201ENST00000411245 120 ntBASIC3.39□□□□□ -1.87
AP5S1Q9NUS5 AC027124.2-201ENST00000428249 105 ntBASIC3.39□□□□□ -1.87
AP5S1Q9NUS5 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC3.39□□□□□ -1.87
AP5S1Q9NUS5 HMGN2P20-201ENST00000437531 273 ntBASIC3.39□□□□□ -1.87
AP5S1Q9NUS5 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.39□□□□□ -1.87
AP5S1Q9NUS5 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.39□□□□□ -1.87
AP5S1Q9NUS5 RN7SL244P-201ENST00000493405 297 ntBASIC3.39□□□□□ -1.87
AP5S1Q9NUS5 AC145146.1-201ENST00000496370 254 ntBASIC3.39□□□□□ -1.87
AP5S1Q9NUS5 RNU6-107P-201ENST00000516643 102 ntBASIC3.39□□□□□ -1.87
AP5S1Q9NUS5 SUMO2P18-201ENST00000518873 252 ntBASIC3.39□□□□□ -1.87
AP5S1Q9NUS5 CARD18-203ENST00000532895 422 ntTSL 2 BASIC3.39□□□□□ -1.87
AP5S1Q9NUS5 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.39□□□□□ -1.87
AP5S1Q9NUS5 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC3.39□□□□□ -1.87
AP5S1Q9NUS5 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.39□□□□□ -1.87
AP5S1Q9NUS5 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.39□□□□□ -1.87
AP5S1Q9NUS5 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.39□□□□□ -1.87
AP5S1Q9NUS5 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
AP5S1Q9NUS5 LINC02471-203ENST00000641941 4752 ntBASIC3.39□□□□□ -1.87
AP5S1Q9NUS5 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
AP5S1Q9NUS5 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
AP5S1Q9NUS5 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
AP5S1Q9NUS5 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
AP5S1Q9NUS5 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC3.38□□□□□ -1.87
AP5S1Q9NUS5 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC3.38□□□□□ -1.87
AP5S1Q9NUS5 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
AP5S1Q9NUS5 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
AP5S1Q9NUS5 Y_RNA.7-201ENST00000362352 102 ntBASIC3.38□□□□□ -1.87
AP5S1Q9NUS5 RNA5SP502-201ENST00000362694 119 ntBASIC3.38□□□□□ -1.87
AP5S1Q9NUS5 Y_RNA.291-201ENST00000364886 113 ntBASIC3.38□□□□□ -1.87
AP5S1Q9NUS5 RNU1-57P-201ENST00000384491 166 ntBASIC3.38□□□□□ -1.87
AP5S1Q9NUS5 RNA5SP252-201ENST00000391131 119 ntBASIC3.38□□□□□ -1.87
AP5S1Q9NUS5 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
AP5S1Q9NUS5 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.38□□□□□ -1.87
AP5S1Q9NUS5 RNA5SP504-201ENST00000410676 117 ntBASIC3.38□□□□□ -1.87
AP5S1Q9NUS5 RNU5E-9P-201ENST00000411164 104 ntBASIC3.38□□□□□ -1.87
AP5S1Q9NUS5 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC3.38□□□□□ -1.87
AP5S1Q9NUS5 AC079355.1-201ENST00000421770 223 ntBASIC3.38□□□□□ -1.87
AP5S1Q9NUS5 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.38□□□□□ -1.87
AP5S1Q9NUS5 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC3.38□□□□□ -1.87
AP5S1Q9NUS5 Y_RNA.637-201ENST00000459424 114 ntBASIC3.38□□□□□ -1.87
AP5S1Q9NUS5 AC009127.1-201ENST00000467090 155 ntBASIC3.38□□□□□ -1.87
AP5S1Q9NUS5 PPIAP15-201ENST00000479662 484 ntBASIC3.38□□□□□ -1.87
AP5S1Q9NUS5 SNORA31.21-201ENST00000517180 77 ntBASIC3.38□□□□□ -1.87
AP5S1Q9NUS5 AL121932.1-201ENST00000605542 214 ntBASIC3.38□□□□□ -1.87
AP5S1Q9NUS5 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.38□□□□□ -1.87
AP5S1Q9NUS5 AL078604.3-201ENST00000615580 211 ntBASIC3.38□□□□□ -1.87
AP5S1Q9NUS5 AC091905.2-201ENST00000623143 306 ntBASIC3.38□□□□□ -1.87
AP5S1Q9NUS5 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.38□□□□□ -1.87
AP5S1Q9NUS5 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
AP5S1Q9NUS5 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.38□□□□□ -1.87
AP5S1Q9NUS5 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
AP5S1Q9NUS5 AC026241.1-201ENST00000517873 2142 ntBASIC3.38□□□□□ -1.87
AP5S1Q9NUS5 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
AP5S1Q9NUS5 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
AP5S1Q9NUS5 AC007496.3-201ENST00000624987 3443 ntBASIC3.38□□□□□ -1.87
AP5S1Q9NUS5 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
AP5S1Q9NUS5 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.37□□□□□ -1.87
AP5S1Q9NUS5 RNU6-324P-201ENST00000363957 106 ntBASIC3.37□□□□□ -1.87
AP5S1Q9NUS5 SNORD87-201ENST00000364849 89 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms