Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 AC009812.2-201ENST00000517657 457 ntBASIC2.62□□□□□ -1.99
HINT3Q9NQE9 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.62□□□□□ -1.99
HINT3Q9NQE9 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.62□□□□□ -1.99
HINT3Q9NQE9 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.62□□□□□ -1.99
HINT3Q9NQE9 AC078899.3-201ENST00000599065 212 ntBASIC2.62□□□□□ -1.99
HINT3Q9NQE9 RPL23AP78-201ENST00000599928 470 ntBASIC2.62□□□□□ -1.99
HINT3Q9NQE9 AL137843.1-201ENST00000605078 385 ntBASIC2.62□□□□□ -1.99
HINT3Q9NQE9 AL133215.3-201ENST00000609801 448 ntBASIC2.62□□□□□ -1.99
HINT3Q9NQE9 AC090115.4-201ENST00000609970 188 ntBASIC2.62□□□□□ -1.99
HINT3Q9NQE9 AL132765.2-201ENST00000610812 351 ntBASIC2.62□□□□□ -1.99
HINT3Q9NQE9 MIR6733-201ENST00000635723 61 ntBASIC2.62□□□□□ -1.99
HINT3Q9NQE9 AC000403.1-201ENST00000613696 3585 ntBASIC2.61□□□□□ -1.99
HINT3Q9NQE9 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
HINT3Q9NQE9 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
HINT3Q9NQE9 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
HINT3Q9NQE9 SNORA68.1-201ENST00000364537 132 ntBASIC2.61□□□□□ -1.99
HINT3Q9NQE9 Y_RNA.356-201ENST00000365475 113 ntBASIC2.61□□□□□ -1.99
HINT3Q9NQE9 Y_RNA.474-201ENST00000384341 102 ntBASIC2.61□□□□□ -1.99
HINT3Q9NQE9 MIR128-1-201ENST00000384921 82 ntBASIC2.61□□□□□ -1.99
HINT3Q9NQE9 RNU6-1140P-201ENST00000410517 106 ntBASIC2.61□□□□□ -1.99
HINT3Q9NQE9 RN7SKP220-201ENST00000410611 288 ntBASIC2.61□□□□□ -1.99
HINT3Q9NQE9 Z92545.1-201ENST00000411782 234 ntBASIC2.61□□□□□ -1.99
HINT3Q9NQE9 ATG3P1-201ENST00000419507 911 ntBASIC2.61□□□□□ -1.99
HINT3Q9NQE9 NUP35P1-201ENST00000422734 947 ntBASIC2.61□□□□□ -1.99
HINT3Q9NQE9 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.61□□□□□ -1.99
HINT3Q9NQE9 PCMTD1P1-201ENST00000455560 355 ntBASIC2.61□□□□□ -1.99
HINT3Q9NQE9 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.61□□□□□ -1.99
HINT3Q9NQE9 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.61□□□□□ -1.99
HINT3Q9NQE9 RAB11AP2-201ENST00000545905 639 ntBASIC2.61□□□□□ -1.99
HINT3Q9NQE9 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.61□□□□□ -1.99
HINT3Q9NQE9 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.61□□□□□ -1.99
HINT3Q9NQE9 FGF7P1-201ENST00000582820 288 ntBASIC2.61□□□□□ -1.99
HINT3Q9NQE9 POLR3GP2-201ENST00000588366 668 ntBASIC2.61□□□□□ -1.99
HINT3Q9NQE9 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.61□□□□□ -1.99
HINT3Q9NQE9 AC096772.1-201ENST00000609146 564 ntBASIC2.61□□□□□ -1.99
HINT3Q9NQE9 MIR6128-201ENST00000615528 109 ntBASIC2.61□□□□□ -1.99
HINT3Q9NQE9 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.61□□□□□ -1.99
HINT3Q9NQE9 AC099654.5-201ENST00000636479 350 ntBASIC2.61□□□□□ -1.99
HINT3Q9NQE9 MIR7515-201ENST00000637837 67 ntBASIC2.61□□□□□ -1.99
HINT3Q9NQE9 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
HINT3Q9NQE9 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
HINT3Q9NQE9 AL359854.1-201ENST00000614203 1594 ntBASIC2.61□□□□□ -1.99
HINT3Q9NQE9 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.61□□□□□ -1.99
HINT3Q9NQE9 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.6□□□□□ -1.99
HINT3Q9NQE9 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
HINT3Q9NQE9 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
HINT3Q9NQE9 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
HINT3Q9NQE9 RNU1-140P-201ENST00000365040 165 ntBASIC2.6□□□□□ -1.99
HINT3Q9NQE9 RNU6-933P-201ENST00000384424 107 ntBASIC2.6□□□□□ -1.99
HINT3Q9NQE9 RNU6-790P-201ENST00000384479 105 ntBASIC2.6□□□□□ -1.99
HINT3Q9NQE9 RNU6-306P-201ENST00000384617 107 ntBASIC2.6□□□□□ -1.99
HINT3Q9NQE9 MIR544A-201ENST00000384855 91 ntBASIC2.6□□□□□ -1.99
HINT3Q9NQE9 MIR512-1-201ENST00000384913 84 ntBASIC2.6□□□□□ -1.99
HINT3Q9NQE9 MIR517A-201ENST00000385001 87 ntBASIC2.6□□□□□ -1.99
HINT3Q9NQE9 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.6□□□□□ -1.99
HINT3Q9NQE9 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.6□□□□□ -1.99
HINT3Q9NQE9 RPL36AP48-201ENST00000485521 314 ntBASIC2.6□□□□□ -1.99
HINT3Q9NQE9 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.6□□□□□ -1.99
HINT3Q9NQE9 AC116337.1-201ENST00000509680 687 ntBASIC2.6□□□□□ -1.99
HINT3Q9NQE9 PTP4A1P4-201ENST00000512479 322 ntBASIC2.6□□□□□ -1.99
HINT3Q9NQE9 RNU6-277P-201ENST00000516272 106 ntBASIC2.6□□□□□ -1.99
HINT3Q9NQE9 RNU1-54P-201ENST00000517181 120 ntBASIC2.6□□□□□ -1.99
HINT3Q9NQE9 AC022080.3-201ENST00000544433 482 ntBASIC2.6□□□□□ -1.99
HINT3Q9NQE9 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.6□□□□□ -1.99
HINT3Q9NQE9 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.6□□□□□ -1.99
HINT3Q9NQE9 MIR4765-201ENST00000585007 77 ntBASIC2.6□□□□□ -1.99
HINT3Q9NQE9 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.6□□□□□ -1.99
HINT3Q9NQE9 AP001836.1-201ENST00000604675 523 ntBASIC2.6□□□□□ -1.99
HINT3Q9NQE9 AC124303.1-201ENST00000605703 360 ntBASIC2.6□□□□□ -1.99
HINT3Q9NQE9 AC019193.3-201ENST00000609144 554 ntBASIC2.6□□□□□ -1.99
HINT3Q9NQE9 AC009233.1-201ENST00000616477 371 ntBASIC2.6□□□□□ -1.99
HINT3Q9NQE9 AC112487.2-201ENST00000637950 304 ntBASIC2.6□□□□□ -1.99
HINT3Q9NQE9 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.6□□□□□ -1.99
HINT3Q9NQE9 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.6□□□□□ -1.99
HINT3Q9NQE9 AL161431.1-201ENST00000618966 4205 ntBASIC2.6□□□□□ -1.99
HINT3Q9NQE9 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.6□□□□□ -1.99
HINT3Q9NQE9 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.59□□□□□ -1.99
HINT3Q9NQE9 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
HINT3Q9NQE9 SNORD114-19-201ENST00000363072 75 ntBASIC2.59□□□□□ -1.99
HINT3Q9NQE9 MT-TD-201ENST00000387419 68 ntBASIC2.59□□□□□ -1.99
HINT3Q9NQE9 AL513475.1-201ENST00000406602 315 ntBASIC2.59□□□□□ -1.99
HINT3Q9NQE9 RNU4-14P-201ENST00000410858 122 ntBASIC2.59□□□□□ -1.99
HINT3Q9NQE9 RNU6-1328P-201ENST00000410938 106 ntBASIC2.59□□□□□ -1.99
HINT3Q9NQE9 AC096664.2-201ENST00000411843 406 ntBASIC2.59□□□□□ -1.99
HINT3Q9NQE9 AP000275.1-201ENST00000411943 390 ntBASIC2.59□□□□□ -1.99
HINT3Q9NQE9 AC138623.1-201ENST00000418060 216 ntBASIC2.59□□□□□ -1.99
HINT3Q9NQE9 MTND3P9-201ENST00000429526 346 ntBASIC2.59□□□□□ -1.99
HINT3Q9NQE9 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.59□□□□□ -1.99
HINT3Q9NQE9 RPL21P2-201ENST00000440049 481 ntBASIC2.59□□□□□ -1.99
HINT3Q9NQE9 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.59□□□□□ -1.99
HINT3Q9NQE9 Y_RNA.635-201ENST00000459041 101 ntBASIC2.59□□□□□ -1.99
HINT3Q9NQE9 AC112771.1-201ENST00000463581 102 ntBASIC2.59□□□□□ -1.99
HINT3Q9NQE9 RPS29P27-201ENST00000463711 170 ntBASIC2.59□□□□□ -1.99
HINT3Q9NQE9 S100A11P2-201ENST00000467589 312 ntBASIC2.59□□□□□ -1.99
HINT3Q9NQE9 RPL30P12-201ENST00000474666 353 ntBASIC2.59□□□□□ -1.99
HINT3Q9NQE9 AC114801.2-201ENST00000503825 781 ntBASIC2.59□□□□□ -1.99
HINT3Q9NQE9 MTND3P22-201ENST00000510932 243 ntBASIC2.59□□□□□ -1.99
HINT3Q9NQE9 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.59□□□□□ -1.99
HINT3Q9NQE9 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.59□□□□□ -1.99
HINT3Q9NQE9 AP005902.1-201ENST00000521358 186 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms