Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 RNU2-20P-201ENST00000410425 191 ntBASIC1.87□□□□□ -2.11
TM9SF3Q9HD45 RNA5SP111-201ENST00000411386 101 ntBASIC1.87□□□□□ -2.11
TM9SF3Q9HD45 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.87□□□□□ -2.11
TM9SF3Q9HD45 SNORD56-201ENST00000413522 71 ntBASIC1.87□□□□□ -2.11
TM9SF3Q9HD45 VN1R36P-201ENST00000414936 291 ntBASIC1.87□□□□□ -2.11
TM9SF3Q9HD45 EIF1AXP1-201ENST00000419267 435 ntBASIC1.87□□□□□ -2.11
TM9SF3Q9HD45 AL365338.1-201ENST00000422282 858 ntBASIC1.87□□□□□ -2.11
TM9SF3Q9HD45 MED13P1-201ENST00000428342 171 ntBASIC1.87□□□□□ -2.11
TM9SF3Q9HD45 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.87□□□□□ -2.11
TM9SF3Q9HD45 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC1.87□□□□□ -2.11
TM9SF3Q9HD45 AC073614.1-201ENST00000438690 650 ntBASIC1.87□□□□□ -2.11
TM9SF3Q9HD45 MTND2P4-201ENST00000445034 1004 ntBASIC1.87□□□□□ -2.11
TM9SF3Q9HD45 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.87□□□□□ -2.11
TM9SF3Q9HD45 AC117522.1-201ENST00000509821 380 ntBASIC1.87□□□□□ -2.11
TM9SF3Q9HD45 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
TM9SF3Q9HD45 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.87□□□□□ -2.11
TM9SF3Q9HD45 Vault.3-201ENST00000516676 95 ntBASIC1.87□□□□□ -2.11
TM9SF3Q9HD45 SNORA18.6-201ENST00000516792 115 ntBASIC1.87□□□□□ -2.11
TM9SF3Q9HD45 AC090572.1-201ENST00000519251 160 ntBASIC1.87□□□□□ -2.11
TM9SF3Q9HD45 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC1.87□□□□□ -2.11
TM9SF3Q9HD45 AP004607.1-201ENST00000524456 203 ntBASIC1.87□□□□□ -2.11
TM9SF3Q9HD45 CYCSP27-201ENST00000527643 293 ntBASIC1.87□□□□□ -2.11
TM9SF3Q9HD45 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.87□□□□□ -2.11
TM9SF3Q9HD45 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.87□□□□□ -2.11
TM9SF3Q9HD45 AC007834.2-201ENST00000536310 343 ntBASIC1.87□□□□□ -2.11
TM9SF3Q9HD45 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.87□□□□□ -2.11
TM9SF3Q9HD45 ADI1P3-201ENST00000549509 470 ntBASIC1.87□□□□□ -2.11
TM9SF3Q9HD45 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC1.87□□□□□ -2.11
TM9SF3Q9HD45 MTCYBP33-201ENST00000575007 1130 ntBASIC1.87□□□□□ -2.11
TM9SF3Q9HD45 AC008521.1-201ENST00000587471 187 ntBASIC1.87□□□□□ -2.11
TM9SF3Q9HD45 AL359314.1-201ENST00000616913 261 ntBASIC1.87□□□□□ -2.11
TM9SF3Q9HD45 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.87□□□□□ -2.11
TM9SF3Q9HD45 FGF7P2-201ENST00000332473 296 ntBASIC1.86□□□□□ -2.11
TM9SF3Q9HD45 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
TM9SF3Q9HD45 MIR412-201ENST00000362142 91 ntBASIC1.86□□□□□ -2.11
TM9SF3Q9HD45 RNU6-655P-201ENST00000362858 107 ntBASIC1.86□□□□□ -2.11
TM9SF3Q9HD45 Y_RNA.201-201ENST00000364052 96 ntBASIC1.86□□□□□ -2.11
TM9SF3Q9HD45 Y_RNA.238-201ENST00000364441 102 ntBASIC1.86□□□□□ -2.11
TM9SF3Q9HD45 RNU6-282P-201ENST00000365357 103 ntBASIC1.86□□□□□ -2.11
TM9SF3Q9HD45 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
TM9SF3Q9HD45 MIR1-2-201ENST00000384961 85 ntBASIC1.86□□□□□ -2.11
TM9SF3Q9HD45 SNORA17.3-201ENST00000391159 129 ntBASIC1.86□□□□□ -2.11
TM9SF3Q9HD45 RN7SKP142-201ENST00000411236 328 ntBASIC1.86□□□□□ -2.11
TM9SF3Q9HD45 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.86□□□□□ -2.11
TM9SF3Q9HD45 EIF4EP2-201ENST00000422816 654 ntBASIC1.86□□□□□ -2.11
TM9SF3Q9HD45 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.86□□□□□ -2.11
TM9SF3Q9HD45 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.86□□□□□ -2.11
TM9SF3Q9HD45 AL033528.1-201ENST00000453780 140 ntBASIC1.86□□□□□ -2.11
TM9SF3Q9HD45 AC006026.2-201ENST00000457376 180 ntBASIC1.86□□□□□ -2.11
TM9SF3Q9HD45 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.86□□□□□ -2.11
TM9SF3Q9HD45 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.86□□□□□ -2.11
TM9SF3Q9HD45 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.86□□□□□ -2.11
TM9SF3Q9HD45 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.86□□□□□ -2.11
TM9SF3Q9HD45 GNAI2P1-201ENST00000541815 315 ntBASIC1.86□□□□□ -2.11
TM9SF3Q9HD45 OSBPL9P5-201ENST00000542581 171 ntBASIC1.86□□□□□ -2.11
TM9SF3Q9HD45 CR383656.8-201ENST00000549046 145 ntBASIC1.86□□□□□ -2.11
TM9SF3Q9HD45 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.86□□□□□ -2.11
TM9SF3Q9HD45 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.86□□□□□ -2.11
TM9SF3Q9HD45 Z94722.1-201ENST00000604328 474 ntBASIC1.86□□□□□ -2.11
TM9SF3Q9HD45 AC064872.1-201ENST00000604823 1072 ntBASIC1.86□□□□□ -2.11
TM9SF3Q9HD45 MIR98-201ENST00000606724 119 ntBASIC1.86□□□□□ -2.11
TM9SF3Q9HD45 AC073114.1-201ENST00000612027 490 ntBASIC1.86□□□□□ -2.11
TM9SF3Q9HD45 AL359547.2-201ENST00000615810 418 ntBASIC1.86□□□□□ -2.11
TM9SF3Q9HD45 AC022079.1-201ENST00000621546 602 ntBASIC1.86□□□□□ -2.11
TM9SF3Q9HD45 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
TM9SF3Q9HD45 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.85□□□□□ -2.11
TM9SF3Q9HD45 RNY1P12-201ENST00000364251 105 ntBASIC1.85□□□□□ -2.11
TM9SF3Q9HD45 RNA5SP190-201ENST00000365222 118 ntBASIC1.85□□□□□ -2.11
TM9SF3Q9HD45 Y_RNA.367-201ENST00000365544 101 ntBASIC1.85□□□□□ -2.11
TM9SF3Q9HD45 RNU6-1179P-201ENST00000384667 107 ntBASIC1.85□□□□□ -2.11
TM9SF3Q9HD45 Y_RNA.576-201ENST00000384781 102 ntBASIC1.85□□□□□ -2.11
TM9SF3Q9HD45 RNU11-3P-201ENST00000391111 133 ntBASIC1.85□□□□□ -2.11
TM9SF3Q9HD45 RNU6-248P-201ENST00000410720 107 ntBASIC1.85□□□□□ -2.11
TM9SF3Q9HD45 Y_RNA.623-201ENST00000411128 95 ntBASIC1.85□□□□□ -2.11
TM9SF3Q9HD45 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC1.85□□□□□ -2.11
TM9SF3Q9HD45 EEF1A1P40-201ENST00000412883 573 ntBASIC1.85□□□□□ -2.11
TM9SF3Q9HD45 RPL23AP36-201ENST00000413895 458 ntBASIC1.85□□□□□ -2.11
TM9SF3Q9HD45 PGBD4P6-201ENST00000421501 610 ntBASIC1.85□□□□□ -2.11
TM9SF3Q9HD45 AL360271.2-201ENST00000447710 161 ntBASIC1.85□□□□□ -2.11
TM9SF3Q9HD45 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
TM9SF3Q9HD45 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.85□□□□□ -2.11
TM9SF3Q9HD45 AL162395.1-201ENST00000457882 422 ntBASIC1.85□□□□□ -2.11
TM9SF3Q9HD45 MTCO2P6-201ENST00000463134 685 ntBASIC1.85□□□□□ -2.11
TM9SF3Q9HD45 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
TM9SF3Q9HD45 SNORA25.15-201ENST00000516487 89 ntBASIC1.85□□□□□ -2.11
TM9SF3Q9HD45 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.85□□□□□ -2.11
TM9SF3Q9HD45 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.85□□□□□ -2.11
TM9SF3Q9HD45 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.85□□□□□ -2.11
TM9SF3Q9HD45 AP002453.2-201ENST00000533503 320 ntBASIC1.85□□□□□ -2.11
TM9SF3Q9HD45 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.85□□□□□ -2.11
TM9SF3Q9HD45 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.85□□□□□ -2.11
TM9SF3Q9HD45 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC1.85□□□□□ -2.11
TM9SF3Q9HD45 MIR4498-201ENST00000577599 66 ntBASIC1.85□□□□□ -2.11
TM9SF3Q9HD45 AL022154.1-201ENST00000604698 785 ntBASIC1.85□□□□□ -2.11
TM9SF3Q9HD45 Z84480.1-201ENST00000605131 311 ntBASIC1.85□□□□□ -2.11
TM9SF3Q9HD45 U6.42-201ENST00000618440 107 ntBASIC1.85□□□□□ -2.11
TM9SF3Q9HD45 AC084768.2-201ENST00000622736 221 ntBASIC1.85□□□□□ -2.11
TM9SF3Q9HD45 Y_RNA.4-201ENST00000362333 112 ntBASIC1.84□□□□□ -2.11
TM9SF3Q9HD45 SNORA62.1-201ENST00000364287 154 ntBASIC1.84□□□□□ -2.11
TM9SF3Q9HD45 RNU6-384P-201ENST00000364900 104 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms