Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.69□□□□□ -2.14
LRRC40Q9H9A6 RAP1BP2-201ENST00000478270 544 ntBASIC1.69□□□□□ -2.14
LRRC40Q9H9A6 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.69□□□□□ -2.14
LRRC40Q9H9A6 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.69□□□□□ -2.14
LRRC40Q9H9A6 AC074344.1-201ENST00000512823 224 ntBASIC1.69□□□□□ -2.14
LRRC40Q9H9A6 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.69□□□□□ -2.14
LRRC40Q9H9A6 RNVU1-2-201ENST00000516326 135 ntBASIC1.69□□□□□ -2.14
LRRC40Q9H9A6 RNU6-250P-201ENST00000516958 103 ntBASIC1.69□□□□□ -2.14
LRRC40Q9H9A6 RNU2-46P-201ENST00000517038 113 ntBASIC1.69□□□□□ -2.14
LRRC40Q9H9A6 AC115990.1-201ENST00000526957 301 ntBASIC1.69□□□□□ -2.14
LRRC40Q9H9A6 AL022161.1-201ENST00000604390 213 ntBASIC1.69□□□□□ -2.14
LRRC40Q9H9A6 AC025754.2-201ENST00000606491 432 ntBASIC1.69□□□□□ -2.14
LRRC40Q9H9A6 AC004223.4-201ENST00000612426 332 ntBASIC1.69□□□□□ -2.14
LRRC40Q9H9A6 U6.114-201ENST00000636407 96 ntBASIC1.69□□□□□ -2.14
LRRC40Q9H9A6 U4.7-201ENST00000638126 106 ntBASIC1.69□□□□□ -2.14
LRRC40Q9H9A6 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.69□□□□□ -2.14
LRRC40Q9H9A6 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.68□□□□□ -2.14
LRRC40Q9H9A6 MIR126-201ENST00000362291 85 ntBASIC1.68□□□□□ -2.14
LRRC40Q9H9A6 SNORA62.1-201ENST00000364287 154 ntBASIC1.68□□□□□ -2.14
LRRC40Q9H9A6 RNU4-42P-201ENST00000364738 142 ntBASIC1.68□□□□□ -2.14
LRRC40Q9H9A6 RNU6-45P-201ENST00000384471 107 ntBASIC1.68□□□□□ -2.14
LRRC40Q9H9A6 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
LRRC40Q9H9A6 MIR934-201ENST00000401241 83 ntBASIC1.68□□□□□ -2.14
LRRC40Q9H9A6 CYCSP33-201ENST00000414485 327 ntBASIC1.68□□□□□ -2.14
LRRC40Q9H9A6 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.68□□□□□ -2.14
LRRC40Q9H9A6 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC1.68□□□□□ -2.14
LRRC40Q9H9A6 AL035666.1-201ENST00000446195 348 ntBASIC1.68□□□□□ -2.14
LRRC40Q9H9A6 HMGN2P23-201ENST00000456759 269 ntBASIC1.68□□□□□ -2.14
LRRC40Q9H9A6 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC1.68□□□□□ -2.14
LRRC40Q9H9A6 Vault.3-201ENST00000516676 95 ntBASIC1.68□□□□□ -2.14
LRRC40Q9H9A6 AP001893.2-201ENST00000526949 202 ntBASIC1.68□□□□□ -2.14
LRRC40Q9H9A6 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.68□□□□□ -2.14
LRRC40Q9H9A6 MIR3198-2-201ENST00000577868 80 ntBASIC1.68□□□□□ -2.14
LRRC40Q9H9A6 MIR4255-201ENST00000579351 72 ntBASIC1.68□□□□□ -2.14
LRRC40Q9H9A6 AC010900.2-201ENST00000604508 210 ntBASIC1.68□□□□□ -2.14
LRRC40Q9H9A6 CLPTM1LP1-201ENST00000604519 484 ntBASIC1.68□□□□□ -2.14
LRRC40Q9H9A6 AC116312.1-201ENST00000606841 314 ntBASIC1.68□□□□□ -2.14
LRRC40Q9H9A6 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC1.68□□□□□ -2.14
LRRC40Q9H9A6 Z69720.2-201ENST00000624755 279 ntBASIC1.68□□□□□ -2.14
LRRC40Q9H9A6 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
LRRC40Q9H9A6 AC233981.2-201ENST00000611524 1614 ntBASIC1.68□□□□□ -2.14
LRRC40Q9H9A6 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
LRRC40Q9H9A6 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.67□□□□□ -2.14
LRRC40Q9H9A6 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.67□□□□□ -2.14
LRRC40Q9H9A6 RNA5SP493-201ENST00000364115 91 ntBASIC1.67□□□□□ -2.14
LRRC40Q9H9A6 MIR30A-201ENST00000385092 71 ntBASIC1.67□□□□□ -2.14
LRRC40Q9H9A6 RNA5SP100-201ENST00000410903 110 ntBASIC1.67□□□□□ -2.14
LRRC40Q9H9A6 RNA5SP59-201ENST00000410922 110 ntBASIC1.67□□□□□ -2.14
LRRC40Q9H9A6 RPS20P15-201ENST00000412792 311 ntBASIC1.67□□□□□ -2.14
LRRC40Q9H9A6 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.67□□□□□ -2.14
LRRC40Q9H9A6 AC073614.1-201ENST00000438690 650 ntBASIC1.67□□□□□ -2.14
LRRC40Q9H9A6 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.67□□□□□ -2.14
LRRC40Q9H9A6 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC1.67□□□□□ -2.14
LRRC40Q9H9A6 FABP5P5-201ENST00000515537 406 ntBASIC1.67□□□□□ -2.14
LRRC40Q9H9A6 RNU6-295P-201ENST00000516901 104 ntBASIC1.67□□□□□ -2.14
LRRC40Q9H9A6 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.67□□□□□ -2.14
LRRC40Q9H9A6 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.67□□□□□ -2.14
LRRC40Q9H9A6 TRAV32-201ENST00000553993 340 ntBASIC1.67□□□□□ -2.14
LRRC40Q9H9A6 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
LRRC40Q9H9A6 DEFB122-202ENST00000569013 197 ntBASIC1.67□□□□□ -2.14
LRRC40Q9H9A6 AC103987.3-201ENST00000582071 292 ntBASIC1.67□□□□□ -2.14
LRRC40Q9H9A6 AC010928.2-201ENST00000588017 287 ntBASIC1.67□□□□□ -2.14
LRRC40Q9H9A6 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.67□□□□□ -2.14
LRRC40Q9H9A6 MIR502-201ENST00000606349 86 ntBASIC1.67□□□□□ -2.14
LRRC40Q9H9A6 AC027449.1-201ENST00000608890 407 ntBASIC1.67□□□□□ -2.14
LRRC40Q9H9A6 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.67□□□□□ -2.14
LRRC40Q9H9A6 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.67□□□□□ -2.14
LRRC40Q9H9A6 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.67□□□□□ -2.14
LRRC40Q9H9A6 AC245060.5-201ENST00000610778 3293 ntBASIC1.67□□□□□ -2.14
LRRC40Q9H9A6 MTND5P17-201ENST00000418405 1603 ntBASIC1.66□□□□□ -2.14
LRRC40Q9H9A6 RNU6-1287P-201ENST00000362914 107 ntBASIC1.66□□□□□ -2.14
LRRC40Q9H9A6 RNU6-1060P-201ENST00000384664 107 ntBASIC1.66□□□□□ -2.14
LRRC40Q9H9A6 AL357139.1-201ENST00000407792 426 ntBASIC1.66□□□□□ -2.14
LRRC40Q9H9A6 MTND5P25-201ENST00000430499 799 ntBASIC1.66□□□□□ -2.14
LRRC40Q9H9A6 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.66□□□□□ -2.14
LRRC40Q9H9A6 RNU6-333P-201ENST00000459117 107 ntBASIC1.66□□□□□ -2.14
LRRC40Q9H9A6 BZW1P2-201ENST00000473537 826 ntBASIC1.66□□□□□ -2.14
LRRC40Q9H9A6 AC027575.1-201ENST00000481064 460 ntBASIC1.66□□□□□ -2.14
LRRC40Q9H9A6 MTND3P5-201ENST00000512798 333 ntBASIC1.66□□□□□ -2.14
LRRC40Q9H9A6 AC104136.1-201ENST00000512969 394 ntBASIC1.66□□□□□ -2.14
LRRC40Q9H9A6 RNU6-377P-201ENST00000515965 102 ntBASIC1.66□□□□□ -2.14
LRRC40Q9H9A6 MIR449C-201ENST00000516047 92 ntBASIC1.66□□□□□ -2.14
LRRC40Q9H9A6 AC087883.1-201ENST00000551882 391 ntBASIC1.66□□□□□ -2.14
LRRC40Q9H9A6 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.66□□□□□ -2.14
LRRC40Q9H9A6 MIR3945-201ENST00000581853 98 ntBASIC1.66□□□□□ -2.14
LRRC40Q9H9A6 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.66□□□□□ -2.14
LRRC40Q9H9A6 AC016925.2-201ENST00000605108 242 ntBASIC1.66□□□□□ -2.14
LRRC40Q9H9A6 AC018889.1-201ENST00000605372 397 ntBASIC1.66□□□□□ -2.14
LRRC40Q9H9A6 MIR8081-201ENST00000611533 95 ntBASIC1.66□□□□□ -2.14
LRRC40Q9H9A6 RMST_6.1-201ENST00000611980 203 ntBASIC1.66□□□□□ -2.14
LRRC40Q9H9A6 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.66□□□□□ -2.14
LRRC40Q9H9A6 AC008993.2-201ENST00000631744 806 ntBASIC1.66□□□□□ -2.14
LRRC40Q9H9A6 ZNF680P1-201ENST00000436625 1469 ntBASIC1.66□□□□□ -2.14
LRRC40Q9H9A6 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
LRRC40Q9H9A6 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
LRRC40Q9H9A6 MIR424-201ENST00000362227 98 ntBASIC1.65□□□□□ -2.15
LRRC40Q9H9A6 RNU6-37P-201ENST00000362692 107 ntBASIC1.65□□□□□ -2.15
LRRC40Q9H9A6 RNU6-1285P-201ENST00000363480 105 ntBASIC1.65□□□□□ -2.15
LRRC40Q9H9A6 RNU6-105P-201ENST00000363909 104 ntBASIC1.65□□□□□ -2.15
LRRC40Q9H9A6 RNU6-11P-201ENST00000364234 107 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms