Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.83□□□□□ -1.8
BCAS3Q9H6U6 PHBP14-201ENST00000512887 367 ntBASIC3.83□□□□□ -1.8
BCAS3Q9H6U6 RNU7-175P-201ENST00000515915 61 ntBASIC3.83□□□□□ -1.8
BCAS3Q9H6U6 RNU6-377P-201ENST00000515965 102 ntBASIC3.83□□□□□ -1.8
BCAS3Q9H6U6 RNU1-103P-201ENST00000516502 125 ntBASIC3.83□□□□□ -1.8
BCAS3Q9H6U6 RNU6-1012P-201ENST00000516606 109 ntBASIC3.83□□□□□ -1.8
BCAS3Q9H6U6 MIR2276-201ENST00000516886 89 ntBASIC3.83□□□□□ -1.8
BCAS3Q9H6U6 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.83□□□□□ -1.8
BCAS3Q9H6U6 AC010186.2-204ENST00000537668 439 ntBASIC3.83□□□□□ -1.8
BCAS3Q9H6U6 AL137100.2-201ENST00000555786 315 ntBASIC3.83□□□□□ -1.8
BCAS3Q9H6U6 HMGB1P14-201ENST00000557424 591 ntBASIC3.83□□□□□ -1.8
BCAS3Q9H6U6 TRAV28-201ENST00000557548 323 ntBASIC3.83□□□□□ -1.8
BCAS3Q9H6U6 AL512605.2-201ENST00000592972 256 ntBASIC3.83□□□□□ -1.8
BCAS3Q9H6U6 AL162713.1-201ENST00000604480 262 ntBASIC3.83□□□□□ -1.8
BCAS3Q9H6U6 AC010900.2-201ENST00000604508 210 ntBASIC3.83□□□□□ -1.8
BCAS3Q9H6U6 MIR376A1-201ENST00000616574 68 ntBASIC3.83□□□□□ -1.8
BCAS3Q9H6U6 SCARNA4-202ENST00000625402 129 ntBASIC3.83□□□□□ -1.8
BCAS3Q9H6U6 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
BCAS3Q9H6U6 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
BCAS3Q9H6U6 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
BCAS3Q9H6U6 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
BCAS3Q9H6U6 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.83□□□□□ -1.8
BCAS3Q9H6U6 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
BCAS3Q9H6U6 AC118273.1-201ENST00000525324 3006 ntBASIC3.82□□□□□ -1.8
BCAS3Q9H6U6 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
BCAS3Q9H6U6 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
BCAS3Q9H6U6 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.82□□□□□ -1.8
BCAS3Q9H6U6 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
BCAS3Q9H6U6 RNU6-428P-201ENST00000362942 107 ntBASIC3.82□□□□□ -1.8
BCAS3Q9H6U6 SNORD27-201ENST00000363981 72 ntBASIC3.82□□□□□ -1.8
BCAS3Q9H6U6 RNU6-280P-201ENST00000364145 104 ntBASIC3.82□□□□□ -1.8
BCAS3Q9H6U6 RNU6-336P-201ENST00000364891 107 ntBASIC3.82□□□□□ -1.8
BCAS3Q9H6U6 Y_RNA.358-201ENST00000365491 99 ntBASIC3.82□□□□□ -1.8
BCAS3Q9H6U6 Y_RNA.500-201ENST00000384466 111 ntBASIC3.82□□□□□ -1.8
BCAS3Q9H6U6 AL603910.2-201ENST00000407268 136 ntBASIC3.82□□□□□ -1.8
BCAS3Q9H6U6 TOMM22P1-201ENST00000418578 312 ntBASIC3.82□□□□□ -1.8
BCAS3Q9H6U6 TMEM167AP1-201ENST00000423409 219 ntBASIC3.82□□□□□ -1.8
BCAS3Q9H6U6 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.82□□□□□ -1.8
BCAS3Q9H6U6 MED28P2-201ENST00000475771 317 ntBASIC3.82□□□□□ -1.8
BCAS3Q9H6U6 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.82□□□□□ -1.8
BCAS3Q9H6U6 RNU6-1338P-201ENST00000516328 91 ntBASIC3.82□□□□□ -1.8
BCAS3Q9H6U6 MIR2114-201ENST00000516645 80 ntBASIC3.82□□□□□ -1.8
BCAS3Q9H6U6 RNA5SP291-201ENST00000517222 105 ntBASIC3.82□□□□□ -1.8
BCAS3Q9H6U6 AC022868.1-201ENST00000517767 391 ntBASIC3.82□□□□□ -1.8
BCAS3Q9H6U6 AC093023.1-201ENST00000547375 507 ntBASIC3.82□□□□□ -1.8
BCAS3Q9H6U6 AC025946.2-201ENST00000603398 234 ntBASIC3.82□□□□□ -1.8
BCAS3Q9H6U6 AP002826.1-201ENST00000608835 315 ntBASIC3.82□□□□□ -1.8
BCAS3Q9H6U6 AC004792.1-201ENST00000614523 137 ntBASIC3.82□□□□□ -1.8
BCAS3Q9H6U6 AC004825.2-201ENST00000616634 455 ntBASIC3.82□□□□□ -1.8
BCAS3Q9H6U6 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
BCAS3Q9H6U6 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.82□□□□□ -1.8
BCAS3Q9H6U6 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
BCAS3Q9H6U6 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.82□□□□□ -1.8
BCAS3Q9H6U6 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
BCAS3Q9H6U6 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
BCAS3Q9H6U6 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
BCAS3Q9H6U6 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
BCAS3Q9H6U6 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
BCAS3Q9H6U6 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
BCAS3Q9H6U6 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.81□□□□□ -1.8
BCAS3Q9H6U6 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
BCAS3Q9H6U6 RNU5E-7P-201ENST00000365290 117 ntBASIC3.81□□□□□ -1.8
BCAS3Q9H6U6 RNU6-72P-201ENST00000384285 79 ntBASIC3.81□□□□□ -1.8
BCAS3Q9H6U6 MIR3074-201ENST00000384885 81 ntBASIC3.81□□□□□ -1.8
BCAS3Q9H6U6 AL590383.1-201ENST00000428602 75 ntBASIC3.81□□□□□ -1.8
BCAS3Q9H6U6 RPS6P12-201ENST00000432491 726 ntBASIC3.81□□□□□ -1.8
BCAS3Q9H6U6 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.81□□□□□ -1.8
BCAS3Q9H6U6 PRELID3BP1-201ENST00000457142 540 ntBASIC3.81□□□□□ -1.8
BCAS3Q9H6U6 S100A11P1-201ENST00000477525 312 ntBASIC3.81□□□□□ -1.8
BCAS3Q9H6U6 SNORA31.8-201ENST00000516327 108 ntBASIC3.81□□□□□ -1.8
BCAS3Q9H6U6 SNORA70.16-201ENST00000516390 95 ntBASIC3.81□□□□□ -1.8
BCAS3Q9H6U6 Y_RNA.706-201ENST00000516933 99 ntBASIC3.81□□□□□ -1.8
BCAS3Q9H6U6 AC090617.3-201ENST00000573670 475 ntBASIC3.81□□□□□ -1.8
BCAS3Q9H6U6 AC073410.2-201ENST00000603240 332 ntBASIC3.81□□□□□ -1.8
BCAS3Q9H6U6 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.81□□□□□ -1.8
BCAS3Q9H6U6 Y_RNA.772-201ENST00000606692 102 ntBASIC3.81□□□□□ -1.8
BCAS3Q9H6U6 MIR8057-201ENST00000620957 69 ntBASIC3.81□□□□□ -1.8
BCAS3Q9H6U6 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.81□□□□□ -1.8
BCAS3Q9H6U6 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.81□□□□□ -1.8
BCAS3Q9H6U6 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
BCAS3Q9H6U6 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
BCAS3Q9H6U6 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.8□□□□□ -1.8
BCAS3Q9H6U6 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.8□□□□□ -1.8
BCAS3Q9H6U6 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
BCAS3Q9H6U6 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.8□□□□□ -1.8
BCAS3Q9H6U6 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
BCAS3Q9H6U6 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
BCAS3Q9H6U6 RNU6-78P-201ENST00000362897 107 ntBASIC3.8□□□□□ -1.8
BCAS3Q9H6U6 Y_RNA.274-201ENST00000364714 101 ntBASIC3.8□□□□□ -1.8
BCAS3Q9H6U6 RNU4-9P-201ENST00000364951 139 ntBASIC3.8□□□□□ -1.8
BCAS3Q9H6U6 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.8□□□□□ -1.8
BCAS3Q9H6U6 SNORD63-201ENST00000384262 68 ntBASIC3.8□□□□□ -1.8
BCAS3Q9H6U6 RNU6-886P-201ENST00000384319 105 ntBASIC3.8□□□□□ -1.8
BCAS3Q9H6U6 MIR128-1-201ENST00000384921 82 ntBASIC3.8□□□□□ -1.8
BCAS3Q9H6U6 AL357075.1-201ENST00000404107 726 ntBASIC3.8□□□□□ -1.8
BCAS3Q9H6U6 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.8□□□□□ -1.8
BCAS3Q9H6U6 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.8□□□□□ -1.8
BCAS3Q9H6U6 AC006989.1-201ENST00000427212 131 ntBASIC3.8□□□□□ -1.8
BCAS3Q9H6U6 AC104332.1-201ENST00000440471 797 ntBASIC3.8□□□□□ -1.8
BCAS3Q9H6U6 AL138752.1-201ENST00000452964 351 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms