Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 U2.21-201ENST00000637295 81 ntBASIC4.09□□□□□ -1.75
ATXN3LQ9H3M9 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.09□□□□□ -1.75
ATXN3LQ9H3M9 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
ATXN3LQ9H3M9 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC4.08□□□□□ -1.76
ATXN3LQ9H3M9 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
ATXN3LQ9H3M9 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
ATXN3LQ9H3M9 UBE2WP1-201ENST00000362030 340 ntBASIC4.08□□□□□ -1.76
ATXN3LQ9H3M9 RNU6-778P-201ENST00000363269 103 ntBASIC4.08□□□□□ -1.76
ATXN3LQ9H3M9 Y_RNA.240-201ENST00000364469 95 ntBASIC4.08□□□□□ -1.76
ATXN3LQ9H3M9 SNORA73.2-201ENST00000364946 201 ntBASIC4.08□□□□□ -1.76
ATXN3LQ9H3M9 Y_RNA.331-201ENST00000365267 102 ntBASIC4.08□□□□□ -1.76
ATXN3LQ9H3M9 U8.11-201ENST00000384699 133 ntBASIC4.08□□□□□ -1.76
ATXN3LQ9H3M9 U8.12-201ENST00000384701 133 ntBASIC4.08□□□□□ -1.76
ATXN3LQ9H3M9 RNU6-159P-201ENST00000391080 106 ntBASIC4.08□□□□□ -1.76
ATXN3LQ9H3M9 RNU6-1197P-201ENST00000391183 107 ntBASIC4.08□□□□□ -1.76
ATXN3LQ9H3M9 RPL23AP48-201ENST00000406913 488 ntBASIC4.08□□□□□ -1.76
ATXN3LQ9H3M9 MTHFD2P2-201ENST00000407725 247 ntBASIC4.08□□□□□ -1.76
ATXN3LQ9H3M9 SETP5-201ENST00000437270 562 ntBASIC4.08□□□□□ -1.76
ATXN3LQ9H3M9 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC4.08□□□□□ -1.76
ATXN3LQ9H3M9 AC009237.7-201ENST00000447357 229 ntBASIC4.08□□□□□ -1.76
ATXN3LQ9H3M9 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC4.08□□□□□ -1.76
ATXN3LQ9H3M9 MTATP6P7-201ENST00000453315 681 ntBASIC4.08□□□□□ -1.76
ATXN3LQ9H3M9 U8.18-201ENST00000459285 133 ntBASIC4.08□□□□□ -1.76
ATXN3LQ9H3M9 AP001324.2-201ENST00000461163 319 ntBASIC4.08□□□□□ -1.76
ATXN3LQ9H3M9 SNORA27.4-201ENST00000516650 95 ntBASIC4.08□□□□□ -1.76
ATXN3LQ9H3M9 RNU6-58P-201ENST00000517143 103 ntBASIC4.08□□□□□ -1.76
ATXN3LQ9H3M9 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
ATXN3LQ9H3M9 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC4.08□□□□□ -1.76
ATXN3LQ9H3M9 AC069240.1-201ENST00000548774 375 ntBASIC4.08□□□□□ -1.76
ATXN3LQ9H3M9 AC087499.8-201ENST00000578406 226 ntBASIC4.08□□□□□ -1.76
ATXN3LQ9H3M9 MIR3144-201ENST00000579460 79 ntBASIC4.08□□□□□ -1.76
ATXN3LQ9H3M9 AC006001.4-201ENST00000622243 395 ntBASIC4.08□□□□□ -1.76
ATXN3LQ9H3M9 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.08□□□□□ -1.76
ATXN3LQ9H3M9 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.08□□□□□ -1.76
ATXN3LQ9H3M9 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.08□□□□□ -1.76
ATXN3LQ9H3M9 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
ATXN3LQ9H3M9 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
ATXN3LQ9H3M9 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
ATXN3LQ9H3M9 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
ATXN3LQ9H3M9 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
ATXN3LQ9H3M9 Y_RNA.308-201ENST00000365043 101 ntBASIC4.07□□□□□ -1.76
ATXN3LQ9H3M9 SNORA36A-201ENST00000384221 132 ntBASIC4.07□□□□□ -1.76
ATXN3LQ9H3M9 RNU6-1145P-201ENST00000384246 107 ntBASIC4.07□□□□□ -1.76
ATXN3LQ9H3M9 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC4.07□□□□□ -1.76
ATXN3LQ9H3M9 YME1L1P1-201ENST00000429435 297 ntBASIC4.07□□□□□ -1.76
ATXN3LQ9H3M9 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.07□□□□□ -1.76
ATXN3LQ9H3M9 POLR2KP2-201ENST00000438155 177 ntBASIC4.07□□□□□ -1.76
ATXN3LQ9H3M9 AC007969.2-201ENST00000441891 191 ntBASIC4.07□□□□□ -1.76
ATXN3LQ9H3M9 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC4.07□□□□□ -1.76
ATXN3LQ9H3M9 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.07□□□□□ -1.76
ATXN3LQ9H3M9 SNORA40.9-201ENST00000515895 93 ntBASIC4.07□□□□□ -1.76
ATXN3LQ9H3M9 RNU1-95P-201ENST00000516357 160 ntBASIC4.07□□□□□ -1.76
ATXN3LQ9H3M9 RNU1-128P-201ENST00000516704 160 ntBASIC4.07□□□□□ -1.76
ATXN3LQ9H3M9 MRPS18CP4-201ENST00000535821 231 ntBASIC4.07□□□□□ -1.76
ATXN3LQ9H3M9 HSPE1P4-201ENST00000550617 308 ntBASIC4.07□□□□□ -1.76
ATXN3LQ9H3M9 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC4.07□□□□□ -1.76
ATXN3LQ9H3M9 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.07□□□□□ -1.76
ATXN3LQ9H3M9 AC019159.1-201ENST00000605094 187 ntBASIC4.07□□□□□ -1.76
ATXN3LQ9H3M9 AL034408.1-202ENST00000636088 415 ntBASIC4.07□□□□□ -1.76
ATXN3LQ9H3M9 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
ATXN3LQ9H3M9 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.07□□□□□ -1.76
ATXN3LQ9H3M9 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
ATXN3LQ9H3M9 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ATXN3LQ9H3M9 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.06□□□□□ -1.76
ATXN3LQ9H3M9 SNORD74.4-201ENST00000364129 80 ntBASIC4.06□□□□□ -1.76
ATXN3LQ9H3M9 RNU1-100P-201ENST00000365255 165 ntBASIC4.06□□□□□ -1.76
ATXN3LQ9H3M9 Y_RNA.398-201ENST00000383952 99 ntBASIC4.06□□□□□ -1.76
ATXN3LQ9H3M9 RNU1-73P-201ENST00000383971 164 ntBASIC4.06□□□□□ -1.76
ATXN3LQ9H3M9 U1.1-201ENST00000384101 164 ntBASIC4.06□□□□□ -1.76
ATXN3LQ9H3M9 RNU6-217P-201ENST00000384164 104 ntBASIC4.06□□□□□ -1.76
ATXN3LQ9H3M9 RNU6-1035P-201ENST00000384477 107 ntBASIC4.06□□□□□ -1.76
ATXN3LQ9H3M9 MIR544A-201ENST00000384855 91 ntBASIC4.06□□□□□ -1.76
ATXN3LQ9H3M9 MIR93-201ENST00000385024 80 ntBASIC4.06□□□□□ -1.76
ATXN3LQ9H3M9 RNA5SP306-201ENST00000411087 107 ntBASIC4.06□□□□□ -1.76
ATXN3LQ9H3M9 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.06□□□□□ -1.76
ATXN3LQ9H3M9 RPL21P66-201ENST00000426566 466 ntBASIC4.06□□□□□ -1.76
ATXN3LQ9H3M9 AL591419.1-201ENST00000427423 339 ntBASIC4.06□□□□□ -1.76
ATXN3LQ9H3M9 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.06□□□□□ -1.76
ATXN3LQ9H3M9 GPM6BP3-201ENST00000442797 145 ntBASIC4.06□□□□□ -1.76
ATXN3LQ9H3M9 snoU13.6-201ENST00000458785 104 ntBASIC4.06□□□□□ -1.76
ATXN3LQ9H3M9 snoU13.22-201ENST00000459428 104 ntBASIC4.06□□□□□ -1.76
ATXN3LQ9H3M9 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC4.06□□□□□ -1.76
ATXN3LQ9H3M9 RNU6-1219P-201ENST00000516143 112 ntBASIC4.06□□□□□ -1.76
ATXN3LQ9H3M9 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.06□□□□□ -1.76
ATXN3LQ9H3M9 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
ATXN3LQ9H3M9 MIR3944-201ENST00000581277 108 ntBASIC4.06□□□□□ -1.76
ATXN3LQ9H3M9 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC4.06□□□□□ -1.76
ATXN3LQ9H3M9 AL357075.2-201ENST00000614906 189 ntBASIC4.06□□□□□ -1.76
ATXN3LQ9H3M9 AL591424.2-201ENST00000617023 128 ntBASIC4.06□□□□□ -1.76
ATXN3LQ9H3M9 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.06□□□□□ -1.76
ATXN3LQ9H3M9 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.06□□□□□ -1.76
ATXN3LQ9H3M9 AC106871.1-201ENST00000568324 3102 ntBASIC4.06□□□□□ -1.76
ATXN3LQ9H3M9 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
ATXN3LQ9H3M9 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
ATXN3LQ9H3M9 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.06□□□□□ -1.76
ATXN3LQ9H3M9 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ATXN3LQ9H3M9 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ATXN3LQ9H3M9 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
ATXN3LQ9H3M9 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
ATXN3LQ9H3M9 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms