Protein–RNA interactions for Protein: Q9H2C1

LHX5, LIM/homeobox protein Lhx5, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX5Q9H2C1 PSMA3P-201ENST00000555485 635 ntBASIC1.57□□□□□ -2.16
LHX5Q9H2C1 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.57□□□□□ -2.16
LHX5Q9H2C1 AC015720.1-201ENST00000565251 277 ntBASIC1.57□□□□□ -2.16
LHX5Q9H2C1 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.57□□□□□ -2.16
LHX5Q9H2C1 CLIC4P2-201ENST00000601934 717 ntBASIC1.57□□□□□ -2.16
LHX5Q9H2C1 AL713866.2-201ENST00000603579 219 ntBASIC1.57□□□□□ -2.16
LHX5Q9H2C1 AC087045.1-201ENST00000605856 382 ntBASIC1.57□□□□□ -2.16
LHX5Q9H2C1 MIR15A-201ENST00000607334 83 ntBASIC1.57□□□□□ -2.16
LHX5Q9H2C1 AP001506.1-201ENST00000615444 211 ntBASIC1.57□□□□□ -2.16
LHX5Q9H2C1 AC008121.3-201ENST00000618726 433 ntBASIC1.57□□□□□ -2.16
LHX5Q9H2C1 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.57□□□□□ -2.16
LHX5Q9H2C1 MIR337-201ENST00000362281 93 ntBASIC1.56□□□□□ -2.16
LHX5Q9H2C1 RNU6-898P-201ENST00000365627 104 ntBASIC1.56□□□□□ -2.16
LHX5Q9H2C1 SNORA20.2-201ENST00000383922 131 ntBASIC1.56□□□□□ -2.16
LHX5Q9H2C1 MIR518A2-201ENST00000384966 87 ntBASIC1.56□□□□□ -2.16
LHX5Q9H2C1 CISD1P1-201ENST00000393907 327 ntBASIC1.56□□□□□ -2.16
LHX5Q9H2C1 AL591034.2-201ENST00000402839 359 ntBASIC1.56□□□□□ -2.16
LHX5Q9H2C1 RNU6-174P-201ENST00000410406 106 ntBASIC1.56□□□□□ -2.16
LHX5Q9H2C1 AC127391.1-201ENST00000411737 98 ntBASIC1.56□□□□□ -2.16
LHX5Q9H2C1 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC1.56□□□□□ -2.16
LHX5Q9H2C1 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.56□□□□□ -2.16
LHX5Q9H2C1 AC244636.1-201ENST00000421152 228 ntBASIC1.56□□□□□ -2.16
LHX5Q9H2C1 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.56□□□□□ -2.16
LHX5Q9H2C1 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.56□□□□□ -2.16
LHX5Q9H2C1 RPL23AP30-201ENST00000432419 501 ntBASIC1.56□□□□□ -2.16
LHX5Q9H2C1 HSPE1P21-201ENST00000438283 308 ntBASIC1.56□□□□□ -2.16
LHX5Q9H2C1 RPS24P1-201ENST00000438550 371 ntBASIC1.56□□□□□ -2.16
LHX5Q9H2C1 BTF3P15-201ENST00000455606 336 ntBASIC1.56□□□□□ -2.16
LHX5Q9H2C1 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.56□□□□□ -2.16
LHX5Q9H2C1 AC023790.1-201ENST00000482174 347 ntBASIC1.56□□□□□ -2.16
LHX5Q9H2C1 AC005840.1-201ENST00000498412 377 ntBASIC1.56□□□□□ -2.16
LHX5Q9H2C1 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.56□□□□□ -2.16
LHX5Q9H2C1 TRMT112P2-201ENST00000512910 132 ntBASIC1.56□□□□□ -2.16
LHX5Q9H2C1 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.56□□□□□ -2.16
LHX5Q9H2C1 SCARNA24.1-201ENST00000516465 137 ntBASIC1.56□□□□□ -2.16
LHX5Q9H2C1 SNORA31.24-201ENST00000517232 57 ntBASIC1.56□□□□□ -2.16
LHX5Q9H2C1 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.56□□□□□ -2.16
LHX5Q9H2C1 SEPT7P9-203ENST00000604116 343 ntBASIC1.56□□□□□ -2.16
LHX5Q9H2C1 AC090578.1-201ENST00000604955 591 ntBASIC1.56□□□□□ -2.16
LHX5Q9H2C1 AC073114.1-201ENST00000612027 490 ntBASIC1.56□□□□□ -2.16
LHX5Q9H2C1 AL773524.1-201ENST00000614065 229 ntBASIC1.56□□□□□ -2.16
LHX5Q9H2C1 AL133173.2-201ENST00000614270 90 ntBASIC1.56□□□□□ -2.16
LHX5Q9H2C1 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.56□□□□□ -2.16
LHX5Q9H2C1 AL512643.1-201ENST00000635735 524 ntBASIC1.56□□□□□ -2.16
LHX5Q9H2C1 MIR3974-201ENST00000637126 96 ntBASIC1.56□□□□□ -2.16
LHX5Q9H2C1 TEX21P-201ENST00000447107 1476 ntBASIC1.56□□□□□ -2.16
LHX5Q9H2C1 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.55□□□□□ -2.16
LHX5Q9H2C1 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.55□□□□□ -2.16
LHX5Q9H2C1 AC138393.1-203ENST00000327086 343 ntBASIC1.55□□□□□ -2.16
LHX5Q9H2C1 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.55□□□□□ -2.16
LHX5Q9H2C1 RNY1P10-201ENST00000363268 113 ntBASIC1.55□□□□□ -2.16
LHX5Q9H2C1 RNU1-23P-201ENST00000363361 144 ntBASIC1.55□□□□□ -2.16
LHX5Q9H2C1 RNU4-13P-201ENST00000364019 141 ntBASIC1.55□□□□□ -2.16
LHX5Q9H2C1 RNU6-190P-201ENST00000384154 102 ntBASIC1.55□□□□□ -2.16
LHX5Q9H2C1 SNORA24.1-201ENST00000384401 135 ntBASIC1.55□□□□□ -2.16
LHX5Q9H2C1 MIR301A-201ENST00000385261 86 ntBASIC1.55□□□□□ -2.16
LHX5Q9H2C1 RNU2-39P-201ENST00000410604 198 ntBASIC1.55□□□□□ -2.16
LHX5Q9H2C1 AC090960.1-201ENST00000421072 306 ntBASIC1.55□□□□□ -2.16
LHX5Q9H2C1 MED13P1-201ENST00000428342 171 ntBASIC1.55□□□□□ -2.16
LHX5Q9H2C1 AC073614.1-201ENST00000438690 650 ntBASIC1.55□□□□□ -2.16
LHX5Q9H2C1 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.55□□□□□ -2.16
LHX5Q9H2C1 MTND2P4-201ENST00000445034 1004 ntBASIC1.55□□□□□ -2.16
LHX5Q9H2C1 MTCYBP1-201ENST00000454315 1119 ntBASIC1.55□□□□□ -2.16
LHX5Q9H2C1 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.55□□□□□ -2.16
LHX5Q9H2C1 RNU1-98P-201ENST00000458992 160 ntBASIC1.55□□□□□ -2.16
LHX5Q9H2C1 AC018868.1-201ENST00000491307 315 ntBASIC1.55□□□□□ -2.16
LHX5Q9H2C1 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.55□□□□□ -2.16
LHX5Q9H2C1 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
LHX5Q9H2C1 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.55□□□□□ -2.16
LHX5Q9H2C1 AC010486.3-201ENST00000511602 785 ntBASIC1.55□□□□□ -2.16
LHX5Q9H2C1 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.55□□□□□ -2.16
LHX5Q9H2C1 Y_RNA.675-201ENST00000516389 149 ntBASIC1.55□□□□□ -2.16
LHX5Q9H2C1 Vault.3-201ENST00000516676 95 ntBASIC1.55□□□□□ -2.16
LHX5Q9H2C1 RNU6-572P-201ENST00000516724 80 ntBASIC1.55□□□□□ -2.16
LHX5Q9H2C1 AC090572.1-201ENST00000519251 160 ntBASIC1.55□□□□□ -2.16
LHX5Q9H2C1 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC1.55□□□□□ -2.16
LHX5Q9H2C1 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.55□□□□□ -2.16
LHX5Q9H2C1 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.55□□□□□ -2.16
LHX5Q9H2C1 AC026271.5-201ENST00000577873 130 ntBASIC1.55□□□□□ -2.16
LHX5Q9H2C1 MIR1273C-201ENST00000578669 77 ntBASIC1.55□□□□□ -2.16
LHX5Q9H2C1 MIR3682-201ENST00000581338 84 ntBASIC1.55□□□□□ -2.16
LHX5Q9H2C1 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.55□□□□□ -2.16
LHX5Q9H2C1 AL590229.1-201ENST00000603497 542 ntBASIC1.55□□□□□ -2.16
LHX5Q9H2C1 NDUFA8P1-201ENST00000605525 367 ntBASIC1.55□□□□□ -2.16
LHX5Q9H2C1 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.55□□□□□ -2.16
LHX5Q9H2C1 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.55□□□□□ -2.16
LHX5Q9H2C1 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
LHX5Q9H2C1 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
LHX5Q9H2C1 FARSBP1-201ENST00000435808 1778 ntBASIC1.54□□□□□ -2.16
LHX5Q9H2C1 U8.1-201ENST00000362843 134 ntBASIC1.54□□□□□ -2.16
LHX5Q9H2C1 SNORA75B-201ENST00000384053 137 ntBASIC1.54□□□□□ -2.16
LHX5Q9H2C1 RNY3P9-201ENST00000384727 106 ntBASIC1.54□□□□□ -2.16
LHX5Q9H2C1 SNORA40C-201ENST00000391285 128 ntBASIC1.54□□□□□ -2.16
LHX5Q9H2C1 AL033519.2-201ENST00000403958 392 ntBASIC1.54□□□□□ -2.16
LHX5Q9H2C1 RN7SKP51-201ENST00000410781 304 ntBASIC1.54□□□□□ -2.16
LHX5Q9H2C1 RN7SKP142-201ENST00000411236 328 ntBASIC1.54□□□□□ -2.16
LHX5Q9H2C1 AL031779.1-201ENST00000415663 330 ntBASIC1.54□□□□□ -2.16
LHX5Q9H2C1 MTND3P17-201ENST00000416968 344 ntBASIC1.54□□□□□ -2.16
LHX5Q9H2C1 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.54□□□□□ -2.16
LHX5Q9H2C1 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 169.4 ms