Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
VPS16Q9H269 SNORD62.1-201ENST00000362541 86 ntBASIC3.25□□□□□ -1.89
VPS16Q9H269 Y_RNA.47-201ENST00000362697 108 ntBASIC3.25□□□□□ -1.89
VPS16Q9H269 RNU6-266P-201ENST00000364225 107 ntBASIC3.25□□□□□ -1.89
VPS16Q9H269 SNORD14B-201ENST00000364533 90 ntBASIC3.25□□□□□ -1.89
VPS16Q9H269 Y_RNA.401-201ENST00000383965 117 ntBASIC3.25□□□□□ -1.89
VPS16Q9H269 U3.19-201ENST00000390893 196 ntBASIC3.25□□□□□ -1.89
VPS16Q9H269 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.25□□□□□ -1.89
VPS16Q9H269 RNU2-3P-201ENST00000410144 191 ntBASIC3.25□□□□□ -1.89
VPS16Q9H269 AL592148.1-201ENST00000413568 445 ntBASIC3.25□□□□□ -1.89
VPS16Q9H269 BMS1P22-201ENST00000414726 313 ntBASIC3.25□□□□□ -1.89
VPS16Q9H269 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.25□□□□□ -1.89
VPS16Q9H269 AC098831.1-201ENST00000440661 216 ntBASIC3.25□□□□□ -1.89
VPS16Q9H269 AL731563.1-201ENST00000442202 214 ntBASIC3.25□□□□□ -1.89
VPS16Q9H269 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.25□□□□□ -1.89
VPS16Q9H269 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.25□□□□□ -1.89
VPS16Q9H269 RPS29P2-201ENST00000479278 136 ntBASIC3.25□□□□□ -1.89
VPS16Q9H269 RPS29P20-201ENST00000489592 171 ntBASIC3.25□□□□□ -1.89
VPS16Q9H269 AC092436.3-201ENST00000511788 257 ntBASIC3.25□□□□□ -1.89
VPS16Q9H269 RNU1-86P-201ENST00000516108 154 ntBASIC3.25□□□□□ -1.89
VPS16Q9H269 SCARNA16.2-201ENST00000516520 172 ntBASIC3.25□□□□□ -1.89
VPS16Q9H269 RNU1-107P-201ENST00000516617 154 ntBASIC3.25□□□□□ -1.89
VPS16Q9H269 AC069113.1-201ENST00000517763 267 ntBASIC3.25□□□□□ -1.89
VPS16Q9H269 AC026371.1-201ENST00000551867 419 ntBASIC3.25□□□□□ -1.89
VPS16Q9H269 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.25□□□□□ -1.89
VPS16Q9H269 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.25□□□□□ -1.89
VPS16Q9H269 AC110588.1-201ENST00000559699 137 ntBASIC3.25□□□□□ -1.89
VPS16Q9H269 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.25□□□□□ -1.89
VPS16Q9H269 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.25□□□□□ -1.89
VPS16Q9H269 CYCSP39-201ENST00000565821 309 ntBASIC3.25□□□□□ -1.89
VPS16Q9H269 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.25□□□□□ -1.89
VPS16Q9H269 HMGN2P15-201ENST00000585707 270 ntBASIC3.25□□□□□ -1.89
VPS16Q9H269 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
VPS16Q9H269 AC069200.1-201ENST00000609511 323 ntBASIC3.25□□□□□ -1.89
VPS16Q9H269 AC090425.1-201ENST00000610007 140 ntBASIC3.25□□□□□ -1.89
VPS16Q9H269 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
VPS16Q9H269 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.25□□□□□ -1.89
VPS16Q9H269 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
VPS16Q9H269 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
VPS16Q9H269 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
VPS16Q9H269 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
VPS16Q9H269 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
VPS16Q9H269 Y_RNA.153-201ENST00000363615 91 ntBASIC3.24□□□□□ -1.89
VPS16Q9H269 SNORA54-201ENST00000384281 123 ntBASIC3.24□□□□□ -1.89
VPS16Q9H269 MIR10A-201ENST00000385043 110 ntBASIC3.24□□□□□ -1.89
VPS16Q9H269 CYCSP33-201ENST00000414485 327 ntBASIC3.24□□□□□ -1.89
VPS16Q9H269 AL451074.5-201ENST00000415894 435 ntBASIC3.24□□□□□ -1.89
VPS16Q9H269 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.24□□□□□ -1.89
VPS16Q9H269 RPS29P6-201ENST00000438196 145 ntBASIC3.24□□□□□ -1.89
VPS16Q9H269 RPL7P49-201ENST00000471402 708 ntBASIC3.24□□□□□ -1.89
VPS16Q9H269 AC117440.1-201ENST00000474107 571 ntBASIC3.24□□□□□ -1.89
VPS16Q9H269 AC096745.1-201ENST00000509945 370 ntBASIC3.24□□□□□ -1.89
VPS16Q9H269 MIR3944-201ENST00000581277 108 ntBASIC3.24□□□□□ -1.89
VPS16Q9H269 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.24□□□□□ -1.89
VPS16Q9H269 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.24□□□□□ -1.89
VPS16Q9H269 AC104695.3-201ENST00000604052 296 ntBASIC3.24□□□□□ -1.89
VPS16Q9H269 AC124312.5-201ENST00000604451 268 ntBASIC3.24□□□□□ -1.89
VPS16Q9H269 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
VPS16Q9H269 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.24□□□□□ -1.89
VPS16Q9H269 Z69720.2-201ENST00000624755 279 ntBASIC3.24□□□□□ -1.89
VPS16Q9H269 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
VPS16Q9H269 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
VPS16Q9H269 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
VPS16Q9H269 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
VPS16Q9H269 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.23□□□□□ -1.89
VPS16Q9H269 RNU6-384P-201ENST00000364900 104 ntBASIC3.23□□□□□ -1.89
VPS16Q9H269 Y_RNA.324-201ENST00000365165 102 ntBASIC3.23□□□□□ -1.89
VPS16Q9H269 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
VPS16Q9H269 RNU6-842P-201ENST00000384269 107 ntBASIC3.23□□□□□ -1.89
VPS16Q9H269 MIR34B-201ENST00000385076 84 ntBASIC3.23□□□□□ -1.89
VPS16Q9H269 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.23□□□□□ -1.89
VPS16Q9H269 USMG5P1-201ENST00000425964 177 ntBASIC3.23□□□□□ -1.89
VPS16Q9H269 RNU7-187P-201ENST00000458985 68 ntBASIC3.23□□□□□ -1.89
VPS16Q9H269 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.23□□□□□ -1.89
VPS16Q9H269 AC022493.2-201ENST00000506122 481 ntBASIC3.23□□□□□ -1.89
VPS16Q9H269 AC087854.1-201ENST00000519706 414 ntBASIC3.23□□□□□ -1.89
VPS16Q9H269 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
VPS16Q9H269 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.23□□□□□ -1.89
VPS16Q9H269 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.23□□□□□ -1.89
VPS16Q9H269 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.23□□□□□ -1.89
VPS16Q9H269 MIR3199-2-201ENST00000636243 86 ntBASIC3.23□□□□□ -1.89
VPS16Q9H269 GABRG2-229ENST00000641017 3628 ntBASIC3.23□□□□□ -1.89
VPS16Q9H269 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
VPS16Q9H269 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
VPS16Q9H269 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.23□□□□□ -1.89
VPS16Q9H269 CDC27P3-201ENST00000635418 1910 ntBASIC3.23□□□□□ -1.89
VPS16Q9H269 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
VPS16Q9H269 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
VPS16Q9H269 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
VPS16Q9H269 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
VPS16Q9H269 RPL9P7-201ENST00000330965 580 ntBASIC3.22□□□□□ -1.89
VPS16Q9H269 SNORA63.1-201ENST00000362493 131 ntBASIC3.22□□□□□ -1.89
VPS16Q9H269 RNU1-35P-201ENST00000362782 153 ntBASIC3.22□□□□□ -1.89
VPS16Q9H269 RNU6-490P-201ENST00000362985 107 ntBASIC3.22□□□□□ -1.89
VPS16Q9H269 Y_RNA.149-201ENST00000363558 117 ntBASIC3.22□□□□□ -1.89
VPS16Q9H269 RNU6-1318P-201ENST00000365389 103 ntBASIC3.22□□□□□ -1.89
VPS16Q9H269 SET-203ENST00000372688 801 ntTSL 2 BASIC3.22□□□□□ -1.89
VPS16Q9H269 Z98749.2-208ENST00000381646 500 ntBASIC3.22□□□□□ -1.89
VPS16Q9H269 MT-TR-201ENST00000387439 65 ntBASIC3.22□□□□□ -1.89
VPS16Q9H269 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms