Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
NUCKS1Q9H1E3 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.62□□□□□ -1.67
NUCKS1Q9H1E3 SNORD32A-201ENST00000364805 84 ntBASIC4.62□□□□□ -1.67
NUCKS1Q9H1E3 U3.19-201ENST00000390893 196 ntBASIC4.62□□□□□ -1.67
NUCKS1Q9H1E3 Y_RNA.595-201ENST00000410403 105 ntBASIC4.62□□□□□ -1.67
NUCKS1Q9H1E3 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.62□□□□□ -1.67
NUCKS1Q9H1E3 Y_RNA.637-201ENST00000459424 114 ntBASIC4.62□□□□□ -1.67
NUCKS1Q9H1E3 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.62□□□□□ -1.67
NUCKS1Q9H1E3 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC4.62□□□□□ -1.67
NUCKS1Q9H1E3 AC107027.2-201ENST00000512197 115 ntBASIC4.62□□□□□ -1.67
NUCKS1Q9H1E3 RNU6-659P-201ENST00000516454 104 ntBASIC4.62□□□□□ -1.67
NUCKS1Q9H1E3 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC4.62□□□□□ -1.67
NUCKS1Q9H1E3 AC016256.1-201ENST00000547971 354 ntBASIC4.62□□□□□ -1.67
NUCKS1Q9H1E3 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.62□□□□□ -1.67
NUCKS1Q9H1E3 AC024153.1-201ENST00000603103 365 ntBASIC4.62□□□□□ -1.67
NUCKS1Q9H1E3 AL670379.2-201ENST00000604983 252 ntBASIC4.62□□□□□ -1.67
NUCKS1Q9H1E3 AL138963.2-201ENST00000605137 226 ntBASIC4.62□□□□□ -1.67
NUCKS1Q9H1E3 MIR6758-201ENST00000620653 63 ntBASIC4.62□□□□□ -1.67
NUCKS1Q9H1E3 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
NUCKS1Q9H1E3 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.62□□□□□ -1.67
NUCKS1Q9H1E3 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
NUCKS1Q9H1E3 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NUCKS1Q9H1E3 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NUCKS1Q9H1E3 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NUCKS1Q9H1E3 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NUCKS1Q9H1E3 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
NUCKS1Q9H1E3 SNORD115-8-201ENST00000363856 82 ntBASIC4.61□□□□□ -1.67
NUCKS1Q9H1E3 SNORD115-38-201ENST00000365037 82 ntBASIC4.61□□□□□ -1.67
NUCKS1Q9H1E3 RNU6-142P-201ENST00000384019 107 ntBASIC4.61□□□□□ -1.67
NUCKS1Q9H1E3 RNU6-429P-201ENST00000384582 108 ntBASIC4.61□□□□□ -1.67
NUCKS1Q9H1E3 Y_RNA.563-201ENST00000384707 108 ntBASIC4.61□□□□□ -1.67
NUCKS1Q9H1E3 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
NUCKS1Q9H1E3 RNA5SP31-201ENST00000411144 127 ntBASIC4.61□□□□□ -1.67
NUCKS1Q9H1E3 RNU6-1199P-201ENST00000411249 104 ntBASIC4.61□□□□□ -1.67
NUCKS1Q9H1E3 RPL23AP95-201ENST00000426806 265 ntBASIC4.61□□□□□ -1.67
NUCKS1Q9H1E3 RPL23AP58-201ENST00000440453 469 ntBASIC4.61□□□□□ -1.67
NUCKS1Q9H1E3 AC011276.1-201ENST00000469688 323 ntBASIC4.61□□□□□ -1.67
NUCKS1Q9H1E3 CYCSP26-201ENST00000534107 320 ntBASIC4.61□□□□□ -1.67
NUCKS1Q9H1E3 AC136624.4-201ENST00000573044 370 ntBASIC4.61□□□□□ -1.67
NUCKS1Q9H1E3 MIR4284-201ENST00000578924 81 ntBASIC4.61□□□□□ -1.67
NUCKS1Q9H1E3 Y_RNA.802-201ENST00000614892 130 ntBASIC4.61□□□□□ -1.67
NUCKS1Q9H1E3 TUG1_4.1-201ENST00000619464 181 ntBASIC4.61□□□□□ -1.67
NUCKS1Q9H1E3 MIR6810-201ENST00000622701 70 ntBASIC4.61□□□□□ -1.67
NUCKS1Q9H1E3 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.61□□□□□ -1.67
NUCKS1Q9H1E3 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.61□□□□□ -1.67
NUCKS1Q9H1E3 SRP72P2-201ENST00000344851 1979 ntBASIC4.61□□□□□ -1.67
NUCKS1Q9H1E3 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.61□□□□□ -1.67
NUCKS1Q9H1E3 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
NUCKS1Q9H1E3 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
NUCKS1Q9H1E3 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
NUCKS1Q9H1E3 AL359693.1-201ENST00000614959 2407 ntBASIC4.61□□□□□ -1.67
NUCKS1Q9H1E3 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
NUCKS1Q9H1E3 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
NUCKS1Q9H1E3 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NUCKS1Q9H1E3 RNU6-578P-201ENST00000390980 103 ntBASIC4.6□□□□□ -1.67
NUCKS1Q9H1E3 U3.37-201ENST00000408528 213 ntBASIC4.6□□□□□ -1.67
NUCKS1Q9H1E3 RNU2-68P-201ENST00000410878 191 ntBASIC4.6□□□□□ -1.67
NUCKS1Q9H1E3 AL138785.1-201ENST00000425821 331 ntBASIC4.6□□□□□ -1.67
NUCKS1Q9H1E3 AL358075.3-201ENST00000426289 226 ntBASIC4.6□□□□□ -1.67
NUCKS1Q9H1E3 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.6□□□□□ -1.67
NUCKS1Q9H1E3 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC4.6□□□□□ -1.67
NUCKS1Q9H1E3 RNU6-625P-201ENST00000459412 107 ntBASIC4.6□□□□□ -1.67
NUCKS1Q9H1E3 AL121594.1-201ENST00000475906 575 ntBASIC4.6□□□□□ -1.67
NUCKS1Q9H1E3 RNA5SP309-201ENST00000516670 106 ntBASIC4.6□□□□□ -1.67
NUCKS1Q9H1E3 RNA5SP73-201ENST00000516744 108 ntBASIC4.6□□□□□ -1.67
NUCKS1Q9H1E3 RNU6-1198P-201ENST00000516904 67 ntBASIC4.6□□□□□ -1.67
NUCKS1Q9H1E3 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.6□□□□□ -1.67
NUCKS1Q9H1E3 AC010999.1-201ENST00000611856 324 ntBASIC4.6□□□□□ -1.67
NUCKS1Q9H1E3 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NUCKS1Q9H1E3 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NUCKS1Q9H1E3 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.6□□□□□ -1.67
NUCKS1Q9H1E3 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NUCKS1Q9H1E3 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NUCKS1Q9H1E3 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
NUCKS1Q9H1E3 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
NUCKS1Q9H1E3 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
NUCKS1Q9H1E3 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
NUCKS1Q9H1E3 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
NUCKS1Q9H1E3 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
NUCKS1Q9H1E3 Y_RNA.172-201ENST00000363765 102 ntBASIC4.59□□□□□ -1.67
NUCKS1Q9H1E3 RNU6-873P-201ENST00000363833 107 ntBASIC4.59□□□□□ -1.67
NUCKS1Q9H1E3 RNA5SP509-201ENST00000364577 119 ntBASIC4.59□□□□□ -1.67
NUCKS1Q9H1E3 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
NUCKS1Q9H1E3 AC017083.1-201ENST00000428093 483 ntBASIC4.59□□□□□ -1.67
NUCKS1Q9H1E3 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.59□□□□□ -1.67
NUCKS1Q9H1E3 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.59□□□□□ -1.67
NUCKS1Q9H1E3 RNU6-155P-201ENST00000516347 100 ntBASIC4.59□□□□□ -1.67
NUCKS1Q9H1E3 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
NUCKS1Q9H1E3 MIR4744-201ENST00000581563 82 ntBASIC4.59□□□□□ -1.67
NUCKS1Q9H1E3 AC113403.1-201ENST00000604910 193 ntBASIC4.59□□□□□ -1.67
NUCKS1Q9H1E3 AC091932.3-201ENST00000624223 323 ntBASIC4.59□□□□□ -1.67
NUCKS1Q9H1E3 AC140479.6-201ENST00000633535 357 ntBASIC4.59□□□□□ -1.67
NUCKS1Q9H1E3 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.68
NUCKS1Q9H1E3 CUL1P1-201ENST00000509510 2425 ntBASIC4.58□□□□□ -1.68
NUCKS1Q9H1E3 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.58□□□□□ -1.68
NUCKS1Q9H1E3 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC4.58□□□□□ -1.68
NUCKS1Q9H1E3 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NUCKS1Q9H1E3 RNU6-199P-201ENST00000362954 107 ntBASIC4.58□□□□□ -1.68
NUCKS1Q9H1E3 RNU6-376P-201ENST00000384731 106 ntBASIC4.58□□□□□ -1.68
NUCKS1Q9H1E3 RNU6-1248P-201ENST00000391096 64 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms